Wall clock time and date at job start Tue Mar 9 2021 13:48:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.47509 * 2 1 4 4 C 1.50702 * 109.47007 * 239.99614 * 2 1 3 5 5 C 1.38612 * 120.71489 * 119.72594 * 4 2 1 6 6 N 1.32276 * 119.19330 * 179.78988 * 5 4 2 7 7 C 1.32501 * 120.74251 * 0.47036 * 6 5 4 8 8 N 1.38397 * 119.21770 * 179.75844 * 7 6 5 9 9 C 1.46499 * 120.00333 * 0.02562 * 8 7 6 10 10 H 1.09001 * 112.85170 * 336.20212 * 9 8 7 11 11 C 1.53792 * 113.61292 * 107.50432 * 9 8 7 12 12 C 1.53780 * 87.07762 * 89.11780 * 11 9 8 13 13 H 1.08998 * 113.61604 * 270.88482 * 12 11 9 14 14 C 1.50701 * 113.68915 * 139.99090 * 12 11 9 15 15 C 1.38232 * 119.99980 * 322.19584 * 14 12 11 16 16 C 1.38238 * 120.00251 * 179.80985 * 15 14 12 17 17 C 1.38242 * 119.99469 * 0.41484 * 16 15 14 18 18 C 1.50704 * 119.99701 * 179.79612 * 17 16 15 19 19 F 1.39902 * 109.46841 * 270.01679 * 18 17 16 20 20 F 1.39903 * 109.47375 * 30.01820 * 18 17 16 21 21 F 1.39897 * 109.47249 * 150.02273 * 18 17 16 22 22 C 1.38237 * 120.00124 * 359.81449 * 17 16 15 23 23 C 1.38233 * 120.00013 * 142.45975 * 14 12 11 24 24 C 1.53779 * 113.61700 * 205.00117 * 9 8 7 25 25 N 1.32498 * 121.56087 * 359.77947 * 7 6 5 26 26 C 1.32277 * 120.74314 * 359.97438 * 25 7 6 27 27 H 0.96695 * 113.99582 * 299.99951 * 1 2 3 28 28 H 1.09004 * 109.46926 * 120.00048 * 2 1 3 29 29 H 1.48495 * 109.99824 * 300.00080 * 3 2 1 30 30 H 1.48498 * 109.99663 * 61.31719 * 3 2 1 31 31 H 1.07992 * 120.40378 * 359.97438 * 5 4 2 32 32 H 0.97002 * 119.99884 * 180.02562 * 8 7 6 33 33 H 1.08997 * 113.61348 * 203.66806 * 11 9 8 34 34 H 1.09000 * 113.61001 * 334.57217 * 11 9 8 35 35 H 1.08008 * 120.00104 * 359.97438 * 15 14 12 36 36 H 1.07992 * 120.00492 * 180.21018 * 16 15 14 37 37 H 1.07999 * 120.00005 * 179.97438 * 22 17 16 38 38 H 1.08002 * 120.00134 * 359.97438 * 23 14 12 39 39 H 1.08998 * 113.61591 * 25.43431 * 24 9 8 40 40 H 1.09006 * 113.61421 * 156.33861 * 24 9 8 41 41 H 1.08000 * 120.40064 * 179.97438 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7244 -0.0496 -2.1554 6 7 3.1522 -0.7036 -3.2227 7 6 2.8230 -1.9723 -3.4167 8 7 3.2840 -2.6245 -4.5470 9 6 4.1260 -1.9125 -5.5115 10 1 3.9898 -0.8317 -5.4754 11 6 5.5999 -2.3508 -5.4840 12 6 5.2199 -3.4186 -6.5234 13 1 4.8925 -4.3601 -6.0824 14 6 6.2534 -3.6066 -7.6039 15 6 6.9359 -2.5140 -8.1052 16 6 7.8867 -2.6869 -9.0936 17 6 8.1490 -3.9515 -9.5867 18 6 9.1823 -4.1394 -10.6675 19 9 8.5707 -4.0319 -11.9211 20 9 10.1699 -3.1562 -10.5446 21 9 9.7655 -5.4047 -10.5402 22 6 7.4631 -5.0435 -9.0887 23 6 6.5151 -4.8710 -8.0976 24 6 4.0612 -2.4945 -6.9334 25 7 2.0626 -2.6311 -2.5546 26 6 1.6057 -2.0372 -1.4646 27 1 -0.3932 0.4417 0.7650 28 1 1.7923 -0.5139 0.8900 29 1 1.5617 2.4678 -1.2085 30 1 1.5880 2.4585 1.2242 31 1 2.9923 0.9857 -2.0050 32 1 3.0496 -3.5532 -4.7005 33 1 6.2871 -1.5955 -5.8652 34 1 5.9141 -2.7659 -4.5264 35 1 6.7281 -1.5255 -7.7228 36 1 8.4223 -1.8338 -9.4829 37 1 7.6677 -6.0314 -9.4742 38 1 5.9792 -5.7242 -7.7086 39 1 3.1334 -3.0256 -7.1460 40 1 4.3279 -1.7785 -7.7109 41 1 0.9859 -2.5794 -0.7657 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9705040_12175864.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:25 Heat of formation + Delta-G solvation = -62.649583 kcal Electronic energy + Delta-G solvation = -29310.012436 eV Core-core repulsion = 24549.893338 eV Total energy + Delta-G solvation = -4760.119099 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.114 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -51.07190 -48.59195 -48.53308 -42.14821 -41.37373 -39.56564 -38.09697 -35.73459 -34.67949 -33.23092 -32.26151 -31.80563 -28.00423 -26.91203 -26.56982 -25.91569 -24.88581 -24.10230 -23.12736 -22.42762 -20.43977 -19.66308 -19.44951 -19.39076 -19.25612 -18.72780 -18.27714 -17.32404 -16.73372 -16.57453 -16.29028 -16.05242 -15.99821 -15.69578 -15.44583 -15.38387 -15.32424 -15.01631 -14.90825 -14.81463 -14.69002 -14.61984 -14.51492 -14.38450 -14.15510 -13.99952 -13.71607 -13.47803 -13.32573 -12.77311 -12.52965 -12.29560 -12.12006 -12.03239 -11.81079 -11.71302 -11.39584 -11.22660 -10.70309 -10.16857 -10.04620 -10.00375 -9.11170 -5.07123 -0.20262 0.07244 0.16521 0.18201 1.17868 1.49800 1.71260 1.73741 1.86823 2.32126 2.76353 2.76669 3.05923 3.10081 3.25927 3.31277 3.46656 3.47154 3.54896 3.62631 3.69294 3.71427 3.75599 3.81123 3.83423 4.03135 4.12327 4.16458 4.28688 4.43471 4.50050 4.54266 4.58614 4.68407 4.70632 4.79634 4.85341 4.90269 4.97126 5.08648 5.09386 5.28350 5.40947 5.64540 5.78919 6.00645 6.32439 6.41372 7.29451 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.054 4.054 3 Si 0.675 3.325 4 C -0.245 4.245 5 C 0.201 3.799 6 N -0.559 5.559 7 C 0.569 3.431 8 N -0.678 5.678 9 C 0.137 3.863 10 H 0.112 0.888 11 C -0.144 4.144 12 C -0.081 4.081 13 H 0.102 0.898 14 C -0.037 4.037 15 C -0.119 4.119 16 C -0.066 4.066 17 C -0.188 4.188 18 C 0.508 3.492 19 F -0.176 7.176 20 F -0.177 7.177 21 F -0.177 7.177 22 C -0.067 4.067 23 C -0.117 4.117 24 C -0.137 4.137 25 N -0.569 5.569 26 C 0.224 3.776 27 H 0.382 0.618 28 H 0.079 0.921 29 H -0.252 1.252 30 H -0.257 1.257 31 H 0.167 0.833 32 H 0.415 0.585 33 H 0.098 0.902 34 H 0.076 0.924 35 H 0.137 0.863 36 H 0.137 0.863 37 H 0.136 0.864 38 H 0.134 0.866 39 H 0.079 0.921 40 H 0.102 0.898 41 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.220 1.328 3.981 4.203 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.165 4.165 3 Si 0.575 3.425 4 C -0.253 4.253 5 C 0.034 3.966 6 N -0.281 5.281 7 C 0.213 3.787 8 N -0.314 5.314 9 C 0.030 3.970 10 H 0.130 0.870 11 C -0.183 4.183 12 C -0.099 4.099 13 H 0.120 0.880 14 C -0.037 4.037 15 C -0.136 4.136 16 C -0.084 4.084 17 C -0.189 4.189 18 C 0.454 3.546 19 F -0.158 7.158 20 F -0.158 7.158 21 F -0.158 7.158 22 C -0.085 4.085 23 C -0.135 4.135 24 C -0.175 4.175 25 N -0.290 5.290 26 C 0.056 3.944 27 H 0.230 0.770 28 H 0.097 0.903 29 H -0.177 1.177 30 H -0.182 1.182 31 H 0.184 0.816 32 H 0.253 0.747 33 H 0.116 0.884 34 H 0.095 0.905 35 H 0.154 0.846 36 H 0.155 0.845 37 H 0.154 0.846 38 H 0.152 0.848 39 H 0.098 0.902 40 H 0.120 0.880 41 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges 0.145 1.463 2.413 2.825 hybrid contribution -1.288 -0.248 1.003 1.651 sum -1.143 1.215 3.416 3.801 Atomic orbital electron populations 1.86581 1.17872 1.80122 1.49964 1.24408 0.84313 1.10530 0.97288 0.95318 0.91508 0.74705 0.80928 1.20634 1.06792 0.97430 1.00453 1.22731 0.88794 0.98741 0.86349 1.67922 1.28405 1.08398 1.23389 1.19328 0.86832 0.85641 0.86935 1.43777 1.53646 1.14353 1.19648 1.21830 0.89706 0.98059 0.87395 0.86995 1.23618 0.97151 0.98195 0.99292 1.21723 0.94471 0.99216 0.94487 0.88011 1.19965 0.95262 0.93125 0.95366 1.21025 0.96265 0.99382 0.96958 1.20966 0.96465 0.95698 0.95317 1.19994 1.01448 0.96761 1.00723 1.18324 0.80814 0.73884 0.81625 1.93240 1.82844 1.95728 1.43963 1.93202 1.64160 1.62515 1.95944 1.93200 1.85571 1.41169 1.95900 1.20976 0.94092 0.98119 0.95300 1.21083 0.98091 0.97333 0.97013 1.23473 0.98449 0.98978 0.96572 1.67969 1.16056 1.39434 1.05573 1.22796 0.89983 0.90732 0.90862 0.77005 0.90333 1.17656 1.18163 0.81592 0.74741 0.88389 0.90502 0.84551 0.84543 0.84602 0.84780 0.90223 0.88011 0.81333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.10 12.76 -35.23 -0.45 -0.35 16 2 C -0.05 0.08 2.84 36.01 0.10 0.18 16 3 Si 0.67 -1.46 29.87 -169.99 -5.08 -6.54 16 4 C -0.25 -0.11 5.43 -104.35 -0.57 -0.68 16 5 C 0.20 0.12 9.92 -17.22 -0.17 -0.05 16 6 N -0.56 -1.14 9.13 -13.93 -0.13 -1.27 16 7 C 0.57 1.25 8.43 -322.81 -2.72 -1.47 16 8 N -0.68 0.20 5.41 -55.00 -0.30 -0.09 16 9 C 0.14 -0.24 4.33 -67.11 -0.29 -0.53 16 10 H 0.11 -0.09 7.37 -51.93 -0.38 -0.47 16 11 C -0.14 0.36 7.26 -25.91 -0.19 0.17 16 12 C -0.08 0.23 3.85 -90.96 -0.35 -0.12 16 13 H 0.10 -0.34 8.09 -51.93 -0.42 -0.76 16 14 C -0.04 0.06 5.29 -104.63 -0.55 -0.49 16 15 C -0.12 0.19 8.60 -39.58 -0.34 -0.15 16 16 C -0.07 0.03 9.40 -39.58 -0.37 -0.34 16 17 C -0.19 -0.12 5.45 -104.62 -0.57 -0.69 16 18 C 0.51 0.89 3.36 36.01 0.12 1.01 16 19 F -0.18 -0.47 17.30 2.25 0.04 -0.43 16 20 F -0.18 -0.40 16.46 2.25 0.04 -0.36 16 21 F -0.18 -0.41 16.46 2.25 0.04 -0.38 16 22 C -0.07 0.02 9.40 -39.58 -0.37 -0.35 16 23 C -0.12 0.15 9.71 -39.58 -0.38 -0.23 16 24 C -0.14 0.41 7.29 -25.92 -0.19 0.22 16 25 N -0.57 -1.53 10.46 -13.93 -0.15 -1.68 16 26 C 0.22 0.30 10.92 -17.23 -0.19 0.11 16 27 H 0.38 -1.55 8.74 45.56 0.40 -1.15 16 28 H 0.08 -0.26 7.96 -51.93 -0.41 -0.68 16 29 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 30 H -0.26 0.01 7.11 56.52 0.40 0.42 16 31 H 0.17 -0.32 5.04 -52.49 -0.26 -0.59 16 32 H 0.41 -0.57 8.82 -40.82 -0.36 -0.93 16 33 H 0.10 -0.31 6.33 -51.93 -0.33 -0.64 16 34 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 35 H 0.14 -0.48 6.68 -52.48 -0.35 -0.83 16 36 H 0.14 -0.22 7.60 -52.49 -0.40 -0.62 16 37 H 0.14 -0.18 7.60 -52.49 -0.40 -0.58 16 38 H 0.13 -0.41 8.05 -52.49 -0.42 -0.83 16 39 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 40 H 0.10 -0.35 7.71 -51.93 -0.40 -0.75 16 41 H 0.17 -0.10 8.06 -52.49 -0.42 -0.53 16 LS Contribution 357.92 15.07 5.39 5.39 Total: 0.00 -7.26 357.92 -11.83 -19.09 By element: Atomic # 1 Polarization: -5.75 SS G_CDS: -4.21 Total: -9.96 kcal Atomic # 6 Polarization: 3.62 SS G_CDS: -7.03 Total: -3.42 kcal Atomic # 7 Polarization: -2.47 SS G_CDS: -0.57 Total: -3.05 kcal Atomic # 8 Polarization: 0.10 SS G_CDS: -0.45 Total: -0.35 kcal Atomic # 9 Polarization: -1.28 SS G_CDS: 0.11 Total: -1.17 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.08 Total: -6.54 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -7.26 -11.83 -19.09 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9705040_12175864.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.559 kcal (2) G-P(sol) polarization free energy of solvation -7.257 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.816 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.834 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.091 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.650 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds