Wall clock time and date at job start Tue Mar 9 2021 13:48:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.38018 * 120.33118 * 244.71842 * 4 2 1 6 6 N 1.31974 * 120.85660 * 179.73259 * 5 4 2 7 7 C 1.32400 * 121.61583 * 0.58171 * 6 5 4 8 8 N 1.39007 * 119.70598 * 179.70538 * 7 6 5 9 9 C 1.46498 * 120.00216 * 179.97438 * 8 7 6 10 10 H 1.08994 * 112.84874 * 23.80439 * 9 8 7 11 11 C 1.53784 * 113.61413 * 154.99964 * 9 8 7 12 12 C 1.53788 * 87.07934 * 89.11396 * 11 9 8 13 13 H 1.08997 * 113.61805 * 270.79826 * 12 11 9 14 14 C 1.50701 * 113.61326 * 139.98145 * 12 11 9 15 15 C 1.38236 * 119.99696 * 299.72733 * 14 12 11 16 16 C 1.38236 * 119.99592 * 179.74567 * 15 14 12 17 17 C 1.38238 * 120.00083 * 0.54826 * 16 15 14 18 18 C 1.50695 * 119.99641 * 179.72658 * 17 16 15 19 19 F 1.39903 * 109.47297 * 269.97234 * 18 17 16 20 20 F 1.39902 * 109.47603 * 29.97785 * 18 17 16 21 21 F 1.39905 * 109.47077 * 149.98108 * 18 17 16 22 22 C 1.38228 * 119.99964 * 359.70170 * 17 16 15 23 23 C 1.38232 * 120.00313 * 119.99711 * 14 12 11 24 24 C 1.53782 * 87.08147 * 25.43153 * 12 11 9 25 25 C 1.39137 * 120.59411 * 359.68676 * 7 6 5 26 26 C 1.38298 * 119.09192 * 0.02562 * 25 7 6 27 27 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 28 28 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 29 29 H 1.48501 * 109.99918 * 178.67685 * 3 2 1 30 30 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 31 31 H 1.07997 * 119.57506 * 0.03054 * 5 4 2 32 32 H 0.97006 * 119.99427 * 359.97438 * 8 7 6 33 33 H 1.08997 * 113.61522 * 203.66041 * 11 9 8 34 34 H 1.08997 * 113.61308 * 334.48307 * 11 9 8 35 35 H 1.08005 * 120.00485 * 0.02562 * 15 14 12 36 36 H 1.08009 * 119.99811 * 180.27429 * 16 15 14 37 37 H 1.07995 * 120.00378 * 179.97438 * 22 17 16 38 38 H 1.08004 * 119.99667 * 0.02562 * 23 14 12 39 39 H 1.08997 * 113.61464 * 220.01843 * 24 12 11 40 40 H 1.09001 * 113.61173 * 89.11539 * 24 12 11 41 41 H 1.08002 * 120.45606 * 180.02562 * 25 7 6 42 42 H 1.08003 * 120.74497 * 179.97438 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.6431 -0.0213 2.1915 6 7 3.0833 -0.6319 3.2755 7 6 2.8717 -1.9229 3.4793 8 7 3.3585 -2.5271 4.6326 9 6 3.1276 -3.9550 4.8649 10 1 2.9520 -4.5107 3.9438 11 6 4.1719 -4.6058 5.7873 12 6 3.2624 -4.2129 6.9635 13 1 3.4720 -3.2217 7.3654 14 6 3.1685 -5.2702 8.0333 15 6 2.6779 -6.5249 7.7238 16 6 2.5967 -7.4963 8.7040 17 6 2.9955 -7.2095 9.9961 18 6 2.9011 -8.2666 11.0659 19 9 1.6492 -8.1924 11.6859 20 9 3.0611 -9.5306 10.4880 21 9 3.9055 -8.0583 12.0173 22 6 3.4812 -5.9532 10.3067 23 6 3.5678 -4.9836 9.3253 24 6 2.0925 -4.2405 5.9658 25 6 2.1661 -2.6802 2.5495 26 6 1.6875 -2.0663 1.4064 27 1 -0.3934 0.4418 0.7650 28 1 1.7924 -0.5139 -0.8899 29 1 3.5346 1.7702 0.0322 30 1 1.5616 2.4678 -1.2086 31 1 2.8385 1.0323 2.0568 32 1 3.8511 -2.0032 5.2836 33 1 4.2659 -5.6829 5.6489 34 1 5.1340 -4.0935 5.7875 35 1 2.3622 -6.7477 6.7152 36 1 2.2174 -8.4781 8.4612 37 1 3.7924 -5.7289 11.3163 38 1 3.9466 -4.0017 9.5682 39 1 1.3756 -3.4325 6.1111 40 1 1.6181 -5.2178 5.8761 41 1 1.9944 -3.7331 2.7181 42 1 1.1368 -2.6287 0.6669 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9705040_13915762.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:41 Heat of formation + Delta-G solvation = -81.056460 kcal Electronic energy + Delta-G solvation = -29186.885736 eV Core-core repulsion = 24491.394366 eV Total energy + Delta-G solvation = -4695.491370 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.119 amu Computer time = 2.12 seconds Orbital eigenvalues (eV) -51.10342 -48.62391 -48.56378 -41.85337 -41.13493 -39.59894 -37.88117 -35.55218 -33.52060 -32.95679 -32.26766 -31.07109 -28.01654 -26.99546 -26.38637 -25.30205 -24.60477 -24.14429 -22.91390 -22.28427 -20.36368 -19.60020 -19.42388 -19.29454 -19.01876 -18.46047 -17.52656 -17.25418 -16.67567 -16.52620 -16.19666 -16.02034 -15.93444 -15.59398 -15.44104 -15.34818 -15.30456 -15.04547 -14.89689 -14.76507 -14.72201 -14.54374 -14.45189 -14.28267 -14.17215 -14.06683 -13.74647 -13.49507 -13.39396 -12.82190 -12.59310 -12.38025 -12.13432 -12.08400 -12.01970 -11.49666 -11.15155 -10.76840 -10.42999 -10.41212 -10.21641 -10.09466 -8.77961 -5.04908 -0.25120 0.11664 0.20064 0.38371 1.29289 1.62303 1.67820 1.91424 1.97483 2.27096 2.72808 2.79722 3.02282 3.17574 3.37527 3.41211 3.45485 3.46860 3.54847 3.61878 3.70531 3.72167 3.74711 3.88632 3.97381 4.02778 4.10733 4.21574 4.28442 4.31523 4.44934 4.49953 4.52326 4.56682 4.67063 4.70337 4.77598 4.80914 4.90242 4.98091 5.03590 5.05007 5.27800 5.34726 5.47840 5.59604 5.93709 6.44516 6.57466 7.10250 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.052 4.052 3 Si 0.680 3.320 4 C -0.234 4.234 5 C 0.157 3.843 6 N -0.539 5.539 7 C 0.410 3.590 8 N -0.705 5.705 9 C 0.129 3.871 10 H 0.101 0.899 11 C -0.135 4.135 12 C -0.078 4.078 13 H 0.103 0.897 14 C -0.038 4.038 15 C -0.119 4.119 16 C -0.066 4.066 17 C -0.187 4.187 18 C 0.508 3.492 19 F -0.176 7.176 20 F -0.177 7.177 21 F -0.177 7.177 22 C -0.066 4.066 23 C -0.117 4.117 24 C -0.149 4.149 25 C -0.238 4.238 26 C -0.005 4.005 27 H 0.378 0.622 28 H 0.112 0.888 29 H -0.256 1.256 30 H -0.253 1.253 31 H 0.155 0.845 32 H 0.407 0.593 33 H 0.101 0.899 34 H 0.081 0.919 35 H 0.136 0.864 36 H 0.137 0.863 37 H 0.137 0.863 38 H 0.135 0.865 39 H 0.079 0.921 40 H 0.097 0.903 41 H 0.135 0.865 42 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.352 1.088 -0.282 1.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.164 4.164 3 Si 0.582 3.418 4 C -0.240 4.240 5 C 0.000 4.000 6 N -0.256 5.256 7 C 0.174 3.826 8 N -0.337 5.337 9 C 0.022 3.978 10 H 0.119 0.881 11 C -0.173 4.173 12 C -0.096 4.096 13 H 0.121 0.879 14 C -0.038 4.038 15 C -0.137 4.137 16 C -0.085 4.085 17 C -0.188 4.188 18 C 0.453 3.547 19 F -0.157 7.157 20 F -0.158 7.158 21 F -0.158 7.158 22 C -0.084 4.084 23 C -0.135 4.135 24 C -0.188 4.188 25 C -0.262 4.262 26 C -0.031 4.031 27 H 0.226 0.774 28 H 0.129 0.871 29 H -0.181 1.181 30 H -0.178 1.178 31 H 0.172 0.828 32 H 0.243 0.757 33 H 0.119 0.881 34 H 0.099 0.901 35 H 0.154 0.846 36 H 0.155 0.845 37 H 0.154 0.846 38 H 0.153 0.847 39 H 0.098 0.902 40 H 0.116 0.884 41 H 0.153 0.847 42 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.647 1.619 -0.598 1.843 hybrid contribution -0.151 -1.151 -0.134 1.169 sum 0.496 0.468 -0.732 1.000 Atomic orbital electron populations 1.86496 1.17313 1.81675 1.49269 1.24787 0.85034 1.09682 0.96927 0.94911 0.81182 0.78114 0.87608 1.21004 1.06734 0.96123 1.00093 1.22187 0.91442 0.98734 0.87649 1.67125 1.25848 1.09008 1.23591 1.18348 0.89218 0.88430 0.86561 1.44141 1.60350 1.08311 1.20892 1.21857 0.96525 0.81101 0.98274 0.88120 1.23445 0.98032 1.02101 0.93765 1.21673 0.97945 0.97604 0.92401 0.87894 1.19960 0.95117 0.94469 0.94288 1.21008 1.00461 0.92493 0.99730 1.20967 0.96208 1.00160 0.91121 1.19994 1.09421 0.95127 0.94307 1.18321 0.73924 0.81087 0.81324 1.93242 1.42095 1.96288 1.84122 1.93202 1.95284 1.43109 1.84224 1.93204 1.61170 1.94765 1.66679 1.20982 0.95602 0.91297 1.00556 1.21087 1.00537 0.99684 0.92150 1.23684 0.96706 1.03415 0.94982 1.21502 1.06579 1.01387 0.96776 1.21206 0.93105 0.93418 0.95397 0.77426 0.87078 1.18074 1.17781 0.82798 0.75697 0.88088 0.90080 0.84644 0.84538 0.84555 0.84741 0.90210 0.88447 0.84748 0.84648 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.05 12.84 -35.23 -0.45 -0.41 16 2 C -0.05 0.03 2.82 36.01 0.10 0.13 16 3 Si 0.68 -0.84 29.83 -169.99 -5.07 -5.91 16 4 C -0.23 -0.02 5.36 -104.46 -0.56 -0.58 16 5 C 0.16 0.08 9.84 -17.57 -0.17 -0.09 16 6 N -0.54 -1.03 10.39 -12.44 -0.13 -1.16 16 7 C 0.41 0.28 7.65 -155.02 -1.19 -0.91 16 8 N -0.71 1.10 5.43 -53.14 -0.29 0.81 16 9 C 0.13 -0.45 4.11 -67.12 -0.28 -0.72 16 10 H 0.10 -0.39 6.10 -51.93 -0.32 -0.71 16 11 C -0.14 0.54 7.29 -25.91 -0.19 0.35 16 12 C -0.08 0.28 3.86 -90.95 -0.35 -0.07 16 13 H 0.10 -0.39 8.09 -51.93 -0.42 -0.81 16 14 C -0.04 0.08 5.29 -104.62 -0.55 -0.47 16 15 C -0.12 0.26 8.62 -39.58 -0.34 -0.08 16 16 C -0.07 0.06 9.40 -39.58 -0.37 -0.31 16 17 C -0.19 -0.05 5.45 -104.63 -0.57 -0.62 16 18 C 0.51 0.74 3.36 36.00 0.12 0.86 16 19 F -0.18 -0.42 17.30 2.25 0.04 -0.39 16 20 F -0.18 -0.35 16.46 2.25 0.04 -0.31 16 21 F -0.18 -0.36 16.46 2.25 0.04 -0.33 16 22 C -0.07 0.04 9.40 -39.59 -0.37 -0.33 16 23 C -0.12 0.20 9.71 -39.59 -0.38 -0.19 16 24 C -0.15 0.55 7.25 -25.92 -0.19 0.36 16 25 C -0.24 0.05 9.29 -39.23 -0.36 -0.31 16 26 C -0.01 0.00 9.83 -39.32 -0.39 -0.39 16 27 H 0.38 -1.43 8.70 45.56 0.40 -1.03 16 28 H 0.11 -0.02 7.96 -51.93 -0.41 -0.44 16 29 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 30 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 31 H 0.16 -0.24 4.91 -52.49 -0.26 -0.50 16 32 H 0.41 -0.78 8.83 -40.82 -0.36 -1.14 16 33 H 0.10 -0.45 7.73 -51.93 -0.40 -0.85 16 34 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 35 H 0.14 -0.58 6.64 -52.48 -0.35 -0.93 16 36 H 0.14 -0.28 7.60 -52.48 -0.40 -0.68 16 37 H 0.14 -0.23 7.60 -52.49 -0.40 -0.63 16 38 H 0.13 -0.46 8.05 -52.48 -0.42 -0.88 16 39 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 40 H 0.10 -0.44 6.30 -51.93 -0.33 -0.76 16 41 H 0.13 -0.29 6.04 -52.49 -0.32 -0.60 16 42 H 0.14 -0.14 8.06 -52.48 -0.42 -0.56 16 LS Contribution 360.37 15.07 5.43 5.43 Total: 0.00 -6.59 360.37 -10.89 -17.48 By element: Atomic # 1 Polarization: -7.42 SS G_CDS: -4.45 Total: -11.87 kcal Atomic # 6 Polarization: 2.68 SS G_CDS: -6.04 Total: -3.36 kcal Atomic # 7 Polarization: 0.07 SS G_CDS: -0.42 Total: -0.35 kcal Atomic # 8 Polarization: 0.05 SS G_CDS: -0.45 Total: -0.41 kcal Atomic # 9 Polarization: -1.13 SS G_CDS: 0.11 Total: -1.02 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.07 Total: -5.91 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -6.59 -10.89 -17.48 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9705040_13915762.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.575 kcal (2) G-P(sol) polarization free energy of solvation -6.588 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.163 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.894 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.481 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.056 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.12 seconds