Wall clock time and date at job start Tue Mar 9 2021 13:49:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86305 * 109.47109 * 2 1 4 4 C 1.50706 * 109.47007 * 119.99399 * 2 1 3 5 5 C 1.37986 * 120.32628 * 245.02565 * 4 2 1 6 6 N 1.32011 * 120.89630 * 179.72323 * 5 4 2 7 7 C 1.32340 * 121.64646 * 0.52009 * 6 5 4 8 8 N 1.39150 * 119.71521 * 179.75504 * 7 6 5 9 9 C 1.46496 * 119.99930 * 359.72813 * 8 7 6 10 10 H 1.09001 * 112.85032 * 336.19748 * 9 8 7 11 11 C 1.53782 * 113.68971 * 107.46277 * 9 8 7 12 12 C 1.53962 * 87.11063 * 89.19569 * 11 9 8 13 13 H 1.08993 * 113.61598 * 270.84305 * 12 11 9 14 14 C 1.50700 * 113.66521 * 139.88647 * 12 11 9 15 15 C 1.38444 * 120.01065 * 142.27739 * 14 12 11 16 16 F 1.35097 * 120.02445 * 359.97438 * 15 14 12 17 17 C 1.38479 * 119.94648 * 179.72724 * 15 14 12 18 18 C 1.38174 * 119.97362 * 0.57332 * 17 15 14 19 19 C 1.38260 * 120.02930 * 359.70135 * 18 17 15 20 20 C 1.38220 * 120.01767 * 322.55769 * 14 12 11 21 21 C 1.53781 * 113.61266 * 204.99851 * 9 8 7 22 22 C 1.39342 * 120.56197 * 359.47808 * 7 6 5 23 23 F 1.35107 * 120.46775 * 180.27513 * 22 7 6 24 24 C 1.38440 * 119.05938 * 0.25781 * 22 7 6 25 25 H 0.96696 * 114.00420 * 300.00617 * 1 2 3 26 26 H 1.08996 * 109.47478 * 239.99462 * 2 1 3 27 27 H 1.48501 * 109.99577 * 299.99582 * 3 2 1 28 28 H 1.48488 * 110.00380 * 61.31445 * 3 2 1 29 29 H 1.07995 * 119.54977 * 359.97438 * 5 4 2 30 30 H 0.97001 * 119.99382 * 179.72426 * 8 7 6 31 31 H 1.08997 * 113.61668 * 203.67120 * 11 9 8 32 32 H 1.08998 * 113.61674 * 334.49629 * 11 9 8 33 33 H 1.07996 * 120.01115 * 180.29021 * 17 15 14 34 34 H 1.08005 * 119.98378 * 179.72082 * 18 17 15 35 35 H 1.08002 * 119.97966 * 180.02562 * 19 18 17 36 36 H 1.08007 * 119.98386 * 359.94844 * 20 14 12 37 37 H 1.09002 * 113.61445 * 25.35018 * 21 9 8 38 38 H 1.09002 * 113.61408 * 156.16749 * 21 9 8 39 39 H 1.07995 * 120.75985 * 180.02562 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6376 -0.0198 2.1941 6 7 3.0782 -0.6296 3.2789 7 6 2.8716 -1.9209 3.4819 8 7 3.3583 -2.5239 4.6377 9 6 4.1011 -1.7311 5.6204 10 1 4.5600 -0.8422 5.1875 11 6 3.3132 -1.4510 6.9110 12 6 3.8936 -2.7677 7.4586 13 1 3.2831 -3.6417 7.2319 14 6 4.2970 -2.6941 8.9088 15 6 4.0885 -3.7803 9.7415 16 9 3.5228 -4.9064 9.2547 17 6 4.4648 -3.7132 11.0725 18 6 5.0370 -2.5584 11.5707 19 6 5.2396 -1.4723 10.7396 20 6 4.8700 -1.5402 9.4094 21 6 5.0644 -2.5640 6.4825 22 6 2.1658 -2.6804 2.5511 23 9 1.9512 -3.9974 2.7630 24 6 1.6873 -2.0664 1.4063 25 1 -0.3934 0.4417 0.7649 26 1 1.7923 -0.5139 -0.8899 27 1 1.5615 2.4678 -1.2086 28 1 1.5878 2.4586 1.2240 29 1 2.8292 1.0346 2.0608 30 1 3.2057 -3.4692 4.7925 31 1 3.6561 -0.5672 7.4489 32 1 2.2318 -1.4710 6.7755 33 1 4.3069 -4.5615 11.7219 34 1 5.3265 -2.5044 12.6099 35 1 5.6873 -0.5702 11.1297 36 1 5.0293 -0.6914 8.7608 37 1 5.3968 -3.4838 6.0013 38 1 5.8869 -1.9846 6.9020 39 1 1.1365 -2.6288 0.6669 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9705096_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:49:33 Heat of formation + Delta-G solvation = -20.862474 kcal Electronic energy + Delta-G solvation = -25658.705603 eV Core-core repulsion = 21590.816035 eV Total energy + Delta-G solvation = -4067.889568 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.112 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -49.86686 -49.82766 -41.63102 -40.93362 -39.24165 -38.03122 -35.55244 -33.24213 -32.29604 -31.50324 -30.84520 -26.92961 -26.80602 -26.13548 -24.88539 -23.73126 -23.00016 -22.61465 -20.30695 -19.54501 -18.75859 -18.47214 -18.22035 -17.57273 -17.42133 -17.03540 -16.90811 -16.55399 -16.32990 -16.19791 -15.96445 -15.51648 -15.41629 -15.16327 -14.86855 -14.69971 -14.35585 -14.13658 -14.01681 -13.90844 -13.59025 -13.45089 -13.16551 -13.05996 -12.69296 -12.44611 -12.07578 -12.00280 -11.93304 -11.33792 -11.18139 -10.77306 -10.63978 -10.54575 -9.94785 -9.60666 -8.79515 -5.02071 -0.07700 0.10501 0.14433 0.19026 1.20642 1.52563 1.89018 1.91428 2.52363 2.54870 3.03145 3.18780 3.26881 3.33552 3.38807 3.53892 3.56246 3.60814 3.75411 3.82453 3.85985 3.96547 3.97816 4.08846 4.25650 4.31036 4.41968 4.45335 4.58159 4.61332 4.69104 4.74482 4.85379 4.86608 4.93758 4.97056 5.03929 5.05299 5.18568 5.35518 5.40406 5.44106 5.88390 5.95639 6.15223 6.34620 6.93688 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.062 4.062 3 Si 0.684 3.316 4 C -0.207 4.207 5 C 0.146 3.854 6 N -0.510 5.510 7 C 0.393 3.607 8 N -0.699 5.699 9 C 0.135 3.865 10 H 0.112 0.888 11 C -0.143 4.143 12 C -0.077 4.077 13 H 0.099 0.901 14 C -0.104 4.104 15 C 0.099 3.901 16 F -0.138 7.138 17 C -0.152 4.152 18 C -0.095 4.095 19 C -0.127 4.127 20 C -0.090 4.090 21 C -0.136 4.136 22 C -0.020 4.020 23 F -0.133 7.133 24 C -0.037 4.037 25 H 0.376 0.624 26 H 0.120 0.880 27 H -0.254 1.254 28 H -0.256 1.256 29 H 0.164 0.836 30 H 0.413 0.587 31 H 0.096 0.904 32 H 0.074 0.926 33 H 0.135 0.865 34 H 0.133 0.867 35 H 0.131 0.869 36 H 0.134 0.866 37 H 0.077 0.923 38 H 0.101 0.899 39 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.510 2.801 1.328 4.683 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.173 4.173 3 Si 0.585 3.415 4 C -0.213 4.213 5 C -0.011 4.011 6 N -0.227 5.227 7 C 0.155 3.845 8 N -0.331 5.331 9 C 0.029 3.971 10 H 0.130 0.870 11 C -0.182 4.182 12 C -0.096 4.096 13 H 0.118 0.882 14 C -0.105 4.105 15 C 0.080 3.920 16 F -0.117 7.117 17 C -0.171 4.171 18 C -0.113 4.113 19 C -0.145 4.145 20 C -0.108 4.108 21 C -0.174 4.174 22 C -0.046 4.046 23 F -0.112 7.112 24 C -0.063 4.063 25 H 0.224 0.776 26 H 0.138 0.862 27 H -0.179 1.179 28 H -0.181 1.181 29 H 0.180 0.820 30 H 0.250 0.750 31 H 0.115 0.885 32 H 0.093 0.907 33 H 0.153 0.847 34 H 0.151 0.849 35 H 0.149 0.851 36 H 0.152 0.848 37 H 0.096 0.904 38 H 0.119 0.881 39 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 3.917 3.812 1.516 5.672 hybrid contribution -1.811 -1.680 0.114 2.473 sum 2.106 2.132 1.630 3.411 Atomic orbital electron populations 1.86615 1.17699 1.79934 1.49354 1.24835 0.83902 1.10847 0.97667 0.95071 0.91517 0.74245 0.80676 1.20865 1.05754 0.94532 1.00106 1.22407 0.91644 0.99564 0.87470 1.67306 1.25019 1.07172 1.23192 1.18403 0.90390 0.88984 0.86726 1.44251 1.58883 1.11793 1.18220 1.21794 0.92341 0.95344 0.87648 0.87012 1.23637 1.01137 0.96989 0.96446 1.21576 0.98388 0.99842 0.89744 0.88243 1.19747 1.01599 0.93549 0.95602 1.17612 0.98594 0.83176 0.92620 1.91493 1.82512 1.49346 1.88352 1.21207 1.01711 1.00215 0.93949 1.21070 0.97567 0.92293 1.00342 1.21252 1.00435 0.99122 0.93680 1.20931 0.97316 0.96886 0.95650 1.23460 0.96748 1.01200 0.96029 1.18003 1.08573 0.79584 0.98438 1.91500 1.93627 1.31194 1.94894 1.21291 0.95517 0.94447 0.95078 0.77590 0.86226 1.17863 1.18096 0.81959 0.74963 0.88519 0.90742 0.84692 0.84928 0.85143 0.84839 0.90444 0.88107 0.83292 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.22 12.84 -35.23 -0.45 -0.67 16 2 C -0.06 0.08 2.82 36.01 0.10 0.18 16 3 Si 0.68 -1.41 29.91 -169.99 -5.08 -6.50 16 4 C -0.21 0.09 5.36 -104.47 -0.56 -0.47 16 5 C 0.15 -0.04 9.84 -17.57 -0.17 -0.21 16 6 N -0.51 -0.67 9.13 -12.36 -0.11 -0.78 16 7 C 0.39 0.57 7.49 -154.85 -1.16 -0.59 16 8 N -0.70 -0.04 5.42 -53.06 -0.29 -0.33 16 9 C 0.13 -0.13 4.35 -67.12 -0.29 -0.42 16 10 H 0.11 -0.06 7.41 -51.93 -0.38 -0.45 16 11 C -0.14 0.15 7.27 -25.82 -0.19 -0.04 16 12 C -0.08 0.04 3.80 -90.86 -0.34 -0.30 16 13 H 0.10 0.03 7.45 -51.93 -0.39 -0.36 16 14 C -0.10 -0.05 5.30 -104.55 -0.55 -0.60 16 15 C 0.10 0.18 7.25 -39.42 -0.29 -0.10 16 16 F -0.14 -0.43 16.36 2.25 0.04 -0.40 16 17 C -0.15 -0.10 10.03 -39.52 -0.40 -0.49 16 18 C -0.09 0.06 10.04 -39.60 -0.40 -0.34 16 19 C -0.13 0.13 10.04 -39.58 -0.40 -0.27 16 20 C -0.09 0.08 8.61 -39.59 -0.34 -0.26 16 21 C -0.14 0.22 7.29 -25.92 -0.19 0.03 16 22 C -0.02 -0.03 7.35 -39.10 -0.29 -0.32 16 23 F -0.13 -0.32 16.65 2.25 0.04 -0.28 16 24 C -0.04 -0.02 9.82 -39.26 -0.39 -0.41 16 25 H 0.38 -0.88 8.70 45.56 0.40 -0.48 16 26 H 0.12 -0.24 7.96 -51.93 -0.41 -0.65 16 27 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 28 H -0.26 0.09 7.01 56.52 0.40 0.49 16 29 H 0.16 -0.39 4.84 -52.49 -0.25 -0.64 16 30 H 0.41 -0.24 8.18 -40.82 -0.33 -0.57 16 31 H 0.10 -0.20 6.31 -51.93 -0.33 -0.52 16 32 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 33 H 0.14 -0.09 8.06 -52.49 -0.42 -0.51 16 34 H 0.13 -0.35 8.06 -52.48 -0.42 -0.77 16 35 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 36 H 0.13 -0.37 6.66 -52.48 -0.35 -0.72 16 37 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.10 -0.24 7.72 -51.93 -0.40 -0.64 16 39 H 0.15 -0.05 8.06 -52.49 -0.42 -0.47 16 LS Contribution 334.81 15.07 5.05 5.05 Total: 0.00 -5.67 334.81 -10.86 -16.53 By element: Atomic # 1 Polarization: -3.81 SS G_CDS: -4.19 Total: -8.00 kcal Atomic # 6 Polarization: 1.22 SS G_CDS: -5.85 Total: -4.62 kcal Atomic # 7 Polarization: -0.71 SS G_CDS: -0.40 Total: -1.11 kcal Atomic # 8 Polarization: -0.22 SS G_CDS: -0.45 Total: -0.67 kcal Atomic # 9 Polarization: -0.75 SS G_CDS: 0.07 Total: -0.68 kcal Atomic # 14 Polarization: -1.41 SS G_CDS: -5.08 Total: -6.50 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -5.67 -10.86 -16.53 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9705096_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.331 kcal (2) G-P(sol) polarization free energy of solvation -5.671 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.003 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.860 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.531 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.862 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds