Wall clock time and date at job start Tue Mar 9 2021 13:49:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46645 * 2 1 4 4 C 1.50696 * 109.47131 * 240.00209 * 2 1 3 5 5 C 1.38605 * 120.72284 * 119.72031 * 4 2 1 6 6 N 1.32272 * 119.19639 * 179.71679 * 5 4 2 7 7 C 1.32498 * 120.74025 * 0.56331 * 6 5 4 8 8 N 1.38404 * 119.21393 * 179.73331 * 7 6 5 9 9 C 1.46502 * 120.00649 * 359.97427 * 8 7 6 10 10 H 1.09001 * 112.84116 * 25.33339 * 9 8 7 11 11 C 1.53776 * 113.61510 * 156.53298 * 9 8 7 12 12 C 1.53773 * 87.08154 * 89.11951 * 11 9 8 13 13 H 1.09003 * 113.61353 * 270.88179 * 12 11 9 14 14 C 1.50707 * 113.61611 * 140.06453 * 12 11 9 15 15 C 1.38235 * 119.99687 * 299.72942 * 14 12 11 16 16 C 1.38233 * 119.99738 * 179.78896 * 15 14 12 17 17 C 1.38236 * 120.00058 * 0.45549 * 16 15 14 18 18 C 1.38234 * 119.99856 * 359.77431 * 17 16 15 19 19 C 1.38228 * 120.00032 * 119.99586 * 14 12 11 20 20 C 1.53781 * 113.61581 * 254.14504 * 9 8 7 21 21 N 1.32489 * 121.56606 * 359.70737 * 7 6 5 22 22 C 1.32276 * 120.74075 * 0.02562 * 21 7 6 23 23 H 0.96700 * 114.00311 * 60.00382 * 1 2 3 24 24 H 1.08999 * 109.47293 * 119.99810 * 2 1 3 25 25 H 1.48499 * 109.99670 * 298.67876 * 3 2 1 26 26 H 1.48497 * 110.00233 * 59.99845 * 3 2 1 27 27 H 1.08001 * 120.39699 * 359.97438 * 5 4 2 28 28 H 0.97002 * 119.99564 * 179.97438 * 8 7 6 29 29 H 1.09004 * 113.60809 * 203.66974 * 11 9 8 30 30 H 1.08995 * 113.61318 * 334.56593 * 11 9 8 31 31 H 1.07997 * 120.00109 * 359.97438 * 15 14 12 32 32 H 1.08002 * 119.99779 * 180.25000 * 16 15 14 33 33 H 1.08005 * 120.00069 * 179.78873 * 17 16 15 34 34 H 1.07995 * 120.00006 * 179.97438 * 18 17 16 35 35 H 1.08002 * 120.00319 * 359.97438 * 19 14 12 36 36 H 1.08995 * 113.61555 * 25.42347 * 20 9 8 37 37 H 1.08994 * 113.61544 * 156.33274 * 20 9 8 38 38 H 1.07999 * 120.40058 * 179.97438 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 2.7243 -0.0495 -2.1555 6 7 3.1533 -0.7038 -3.2220 7 6 2.8238 -1.9724 -3.4162 8 7 3.2857 -2.6249 -4.5460 9 6 4.1279 -1.9130 -5.5104 10 1 4.6736 -1.0822 -5.0632 11 6 5.0091 -2.8418 -6.3622 12 6 3.8379 -2.9118 -7.3562 13 1 3.1320 -3.7146 -7.1433 14 6 4.2687 -2.8788 -8.8000 15 6 4.9683 -1.7910 -9.2878 16 6 5.3672 -1.7627 -10.6110 17 6 5.0582 -2.8179 -11.4488 18 6 4.3544 -3.9036 -10.9621 19 6 3.9593 -3.9338 -9.6378 20 6 3.3959 -1.5406 -6.8105 21 7 2.0632 -2.6312 -2.5543 22 6 1.6054 -2.0370 -1.4648 23 1 -0.3934 0.4416 -0.7651 24 1 1.7924 -0.5138 0.8900 25 1 1.5877 2.4585 -1.2243 26 1 1.5613 2.4680 1.2084 27 1 2.9921 0.9859 -2.0050 28 1 3.0517 -3.5538 -4.6992 29 1 5.8959 -2.3530 -6.7659 30 1 5.2315 -3.7944 -5.8816 31 1 5.2059 -0.9646 -8.6344 32 1 5.9174 -0.9146 -10.9912 33 1 5.3669 -2.7943 -12.4835 34 1 4.1127 -4.7278 -11.6167 35 1 3.4093 -4.7820 -9.2577 36 1 2.3168 -1.4437 -6.6917 37 1 3.8423 -0.6968 -7.3366 38 1 0.9854 -2.5791 -0.7662 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9705152_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:49:43 Heat of formation + Delta-G solvation = 84.402226 kcal Electronic energy + Delta-G solvation = -21010.723484 eV Core-core repulsion = 17820.880576 eV Total energy + Delta-G solvation = -3189.842908 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 284.127 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.14401 -41.13324 -39.21591 -38.11545 -35.53828 -34.67994 -32.54218 -31.83604 -31.22609 -26.98915 -26.78565 -26.09669 -25.45842 -23.62205 -23.20512 -22.39126 -20.27699 -19.57753 -18.59156 -18.07642 -17.92843 -16.66967 -16.58579 -16.30476 -16.12488 -15.89079 -15.70338 -15.67527 -15.01690 -14.66313 -14.49824 -14.29231 -14.11779 -13.99791 -13.59007 -13.25675 -13.15468 -12.74152 -12.27459 -12.18858 -11.97103 -11.84524 -11.76181 -11.72085 -11.30841 -11.09881 -10.72231 -10.01383 -9.81684 -9.56921 -9.10766 -5.03510 0.06423 0.16931 0.43300 0.50409 1.21497 1.52138 1.76093 1.91221 2.80157 2.84214 3.12617 3.30063 3.42472 3.59138 3.65049 3.65595 3.71228 3.78964 3.88240 4.00637 4.11018 4.19784 4.20746 4.25205 4.52693 4.54393 4.59262 4.64770 4.67356 4.71129 4.79124 4.94476 4.96620 5.06529 5.11535 5.15700 5.32722 5.57826 5.64058 5.71657 5.80931 6.02113 6.10423 6.33388 6.40368 7.29888 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.053 4.053 3 Si 0.678 3.322 4 C -0.293 4.293 5 C 0.199 3.801 6 N -0.560 5.560 7 C 0.570 3.430 8 N -0.677 5.677 9 C 0.136 3.864 10 H 0.110 0.890 11 C -0.136 4.136 12 C -0.074 4.074 13 H 0.096 0.904 14 C -0.072 4.072 15 C -0.117 4.117 16 C -0.118 4.118 17 C -0.125 4.125 18 C -0.118 4.118 19 C -0.117 4.117 20 C -0.144 4.144 21 N -0.570 5.570 22 C 0.223 3.777 23 H 0.376 0.624 24 H 0.120 0.880 25 H -0.257 1.257 26 H -0.253 1.253 27 H 0.167 0.833 28 H 0.415 0.585 29 H 0.100 0.900 30 H 0.077 0.923 31 H 0.123 0.877 32 H 0.122 0.878 33 H 0.121 0.879 34 H 0.122 0.878 35 H 0.120 0.880 36 H 0.072 0.928 37 H 0.096 0.904 38 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.556 0.708 -0.601 2.720 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.164 4.164 3 Si 0.579 3.421 4 C -0.301 4.301 5 C 0.031 3.969 6 N -0.282 5.282 7 C 0.214 3.786 8 N -0.313 5.313 9 C 0.030 3.970 10 H 0.128 0.872 11 C -0.174 4.174 12 C -0.093 4.093 13 H 0.114 0.886 14 C -0.072 4.072 15 C -0.135 4.135 16 C -0.136 4.136 17 C -0.143 4.143 18 C -0.136 4.136 19 C -0.135 4.135 20 C -0.183 4.183 21 N -0.291 5.291 22 C 0.055 3.945 23 H 0.224 0.776 24 H 0.138 0.862 25 H -0.182 1.182 26 H -0.178 1.178 27 H 0.183 0.817 28 H 0.253 0.747 29 H 0.119 0.881 30 H 0.095 0.905 31 H 0.141 0.859 32 H 0.140 0.860 33 H 0.139 0.861 34 H 0.140 0.860 35 H 0.138 0.862 36 H 0.091 0.909 37 H 0.115 0.885 38 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges 2.902 0.841 -1.023 3.190 hybrid contribution -1.541 -0.201 0.008 1.554 sum 1.361 0.640 -1.015 1.814 Atomic orbital electron populations 1.86609 1.17776 1.79858 1.49364 1.24674 0.83743 1.10521 0.97468 0.95246 0.91523 0.74563 0.80800 1.21659 1.08202 0.98329 1.01907 1.22800 0.88502 0.98898 0.86651 1.67925 1.28149 1.08412 1.23726 1.19352 0.86780 0.85664 0.86835 1.43833 1.53710 1.14292 1.19439 1.21847 0.91522 0.95796 0.87867 0.87211 1.23445 0.97361 1.00641 0.95959 1.21649 0.98051 0.98895 0.90673 0.88582 1.19688 0.98086 0.94495 0.94894 1.21016 0.98732 0.98065 0.95701 1.21181 0.99856 0.98669 0.93870 1.21202 0.98939 0.94199 0.99919 1.21187 0.98331 0.98431 0.95660 1.21081 1.00357 0.98333 0.93749 1.23649 1.01571 0.96903 0.96216 1.67982 1.16048 1.39379 1.05691 1.22838 0.90223 0.90606 0.90818 0.77646 0.86186 1.18222 1.17771 0.81652 0.74742 0.88126 0.90453 0.85922 0.85990 0.86086 0.86046 0.86187 0.90917 0.88547 0.81233 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.08 12.79 -35.23 -0.45 -0.53 16 2 C -0.05 0.07 2.85 36.00 0.10 0.17 16 3 Si 0.68 -1.32 29.87 -169.99 -5.08 -6.40 16 4 C -0.29 0.07 5.40 -104.35 -0.56 -0.50 16 5 C 0.20 0.03 9.92 -17.23 -0.17 -0.14 16 6 N -0.56 -1.16 9.15 -13.93 -0.13 -1.29 16 7 C 0.57 1.36 8.43 -322.81 -2.72 -1.36 16 8 N -0.68 -0.25 5.41 -55.00 -0.30 -0.55 16 9 C 0.14 -0.10 4.30 -67.12 -0.29 -0.39 16 10 H 0.11 -0.01 7.41 -51.93 -0.38 -0.39 16 11 C -0.14 0.23 7.29 -25.93 -0.19 0.04 16 12 C -0.07 0.08 3.87 -90.82 -0.35 -0.27 16 13 H 0.10 -0.13 8.09 -51.93 -0.42 -0.55 16 14 C -0.07 -0.03 5.29 -104.62 -0.55 -0.58 16 15 C -0.12 -0.03 8.63 -39.58 -0.34 -0.37 16 16 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 17 C -0.12 -0.09 10.05 -39.58 -0.40 -0.48 16 18 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 19 C -0.12 -0.08 9.71 -39.59 -0.38 -0.47 16 20 C -0.14 0.12 7.27 -25.77 -0.19 -0.07 16 21 N -0.57 -1.52 10.46 -13.93 -0.15 -1.67 16 22 C 0.22 0.21 10.92 -17.22 -0.19 0.02 16 23 H 0.38 -0.89 8.70 45.56 0.40 -0.49 16 24 H 0.12 -0.27 7.96 -51.93 -0.41 -0.68 16 25 H -0.26 0.00 7.11 56.52 0.40 0.40 16 26 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 27 H 0.17 -0.38 5.04 -52.49 -0.26 -0.64 16 28 H 0.41 -0.25 8.82 -40.82 -0.36 -0.61 16 29 H 0.10 -0.20 7.73 -51.93 -0.40 -0.60 16 30 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.12 -0.16 6.65 -52.49 -0.35 -0.51 16 32 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 33 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 34 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 35 H 0.12 -0.08 8.05 -52.49 -0.42 -0.50 16 36 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 37 H 0.10 -0.13 6.31 -51.93 -0.33 -0.45 16 38 H 0.17 -0.13 8.06 -52.49 -0.42 -0.55 16 LS Contribution 319.19 15.07 4.81 4.81 Total: 0.00 -6.08 319.19 -13.00 -19.08 By element: Atomic # 1 Polarization: -3.44 SS G_CDS: -4.68 Total: -8.12 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: -7.03 Total: -5.34 kcal Atomic # 7 Polarization: -2.94 SS G_CDS: -0.57 Total: -3.51 kcal Atomic # 8 Polarization: -0.08 SS G_CDS: -0.45 Total: -0.53 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.08 Total: -6.40 kcal Total LS contribution 4.81 Total: 4.81 kcal Total: -6.08 -13.00 -19.08 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9705152_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 103.485 kcal (2) G-P(sol) polarization free energy of solvation -6.084 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 97.402 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.999 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.083 kcal (6) G-S(sol) free energy of system = (1) + (5) 84.402 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds