Wall clock time and date at job start Tue Mar 9 2021 13:50:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86295 * 109.47268 * 2 1 4 4 C 1.50695 * 109.46678 * 120.00190 * 2 1 3 5 5 C 1.37994 * 120.32410 * 245.02108 * 4 2 1 6 6 N 1.32010 * 120.89559 * 179.70439 * 5 4 2 7 7 C 1.32334 * 121.65278 * 0.56153 * 6 5 4 8 8 N 1.39140 * 119.72346 * 179.71253 * 7 6 5 9 9 C 1.46506 * 119.99689 * 359.73141 * 8 7 6 10 10 H 1.08996 * 112.84606 * 336.19084 * 9 8 7 11 11 C 1.53775 * 113.61531 * 107.50285 * 9 8 7 12 12 C 1.53775 * 87.08097 * 89.11408 * 11 9 8 13 13 H 1.09000 * 113.61796 * 270.87964 * 12 11 9 14 14 C 1.50710 * 113.68852 * 139.99181 * 12 11 9 15 15 C 1.38232 * 119.99938 * 322.18886 * 14 12 11 16 16 C 1.38236 * 119.99640 * 179.76618 * 15 14 12 17 17 C 1.38234 * 120.00022 * 0.50759 * 16 15 14 18 18 C 1.38227 * 120.00137 * 359.74650 * 17 16 15 19 19 C 1.38234 * 119.99863 * 142.46262 * 14 12 11 20 20 C 1.53777 * 87.08356 * 25.43295 * 12 11 9 21 21 C 1.39343 * 120.55959 * 359.43745 * 7 6 5 22 22 F 1.35102 * 120.47339 * 180.25139 * 21 7 6 23 23 C 1.38443 * 119.05740 * 0.27667 * 21 7 6 24 24 H 0.96700 * 114.00113 * 300.00655 * 1 2 3 25 25 H 1.09003 * 109.47117 * 239.99883 * 2 1 3 26 26 H 1.48496 * 110.00148 * 299.99599 * 3 2 1 27 27 H 1.48502 * 110.00197 * 61.31931 * 3 2 1 28 28 H 1.07995 * 119.55042 * 359.97438 * 5 4 2 29 29 H 0.97000 * 120.00194 * 179.72948 * 8 7 6 30 30 H 1.09003 * 113.61160 * 203.66277 * 11 9 8 31 31 H 1.09002 * 113.61807 * 334.56510 * 11 9 8 32 32 H 1.08001 * 120.00203 * 0.02562 * 15 14 12 33 33 H 1.07998 * 119.99788 * 180.23355 * 16 15 14 34 34 H 1.07997 * 119.99782 * 179.71970 * 17 16 15 35 35 H 1.08000 * 120.00171 * 179.97438 * 18 17 16 36 36 H 1.07999 * 120.00183 * 0.02562 * 19 14 12 37 37 H 1.09003 * 113.61538 * 220.02028 * 20 12 11 38 38 H 1.09005 * 113.61509 * 89.11639 * 20 12 11 39 39 H 1.08007 * 120.75522 * 180.02562 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2304 5 6 2.6377 -0.0200 2.1940 6 7 3.0778 -0.6298 3.2790 7 6 2.8716 -1.9212 3.4818 8 7 3.3586 -2.5244 4.6372 9 6 4.1015 -1.7317 5.6201 10 1 4.5601 -0.8427 5.1872 11 6 3.3126 -1.4540 6.9105 12 6 3.8923 -2.7702 7.4548 13 1 3.2824 -3.6440 7.2252 14 6 4.2928 -2.7011 8.9061 15 6 4.8709 -1.5508 9.4095 16 6 5.2338 -1.4858 10.7418 17 6 5.0282 -2.5747 11.5681 18 6 4.4549 -3.7268 11.0634 19 6 4.0872 -3.7900 9.7324 20 6 5.0651 -2.5646 6.4817 21 6 2.1657 -2.6807 2.5509 22 9 1.9518 -3.9978 2.7622 23 6 1.6873 -2.0665 1.4061 24 1 -0.3933 0.4418 0.7650 25 1 1.7924 -0.5139 -0.8900 26 1 1.5617 2.4678 -1.2085 27 1 1.5880 2.4585 1.2242 28 1 2.8293 1.0344 2.0608 29 1 3.2064 -3.4698 4.7918 30 1 3.6543 -0.5704 7.4496 31 1 2.2313 -1.4763 6.7747 32 1 5.0352 -0.7015 8.7630 33 1 5.6820 -0.5858 11.1360 34 1 5.3158 -2.5255 12.6079 35 1 4.2946 -4.5777 11.7089 36 1 3.6399 -4.6905 9.3379 37 1 5.3987 -3.4835 5.9996 38 1 5.8860 -1.9847 6.9036 39 1 1.1364 -2.6290 0.6667 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9705152_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:50:09 Heat of formation + Delta-G solvation = 22.642553 kcal Electronic energy + Delta-G solvation = -23274.903324 eV Core-core repulsion = 19678.354251 eV Total energy + Delta-G solvation = -3596.549073 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 301.122 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -49.87442 -41.64244 -40.97403 -39.20085 -38.01921 -35.50878 -33.23104 -32.17101 -31.79699 -30.79183 -26.88466 -26.73278 -26.05268 -24.75762 -23.52678 -22.98456 -22.35925 -20.21622 -19.49791 -18.60561 -18.23497 -17.88005 -17.57080 -16.96764 -16.60326 -16.33730 -16.14059 -15.87609 -15.81004 -15.48423 -15.25181 -14.79806 -14.54852 -14.35402 -14.25930 -14.09284 -13.96523 -13.56448 -13.43111 -13.22006 -12.74080 -12.66553 -12.21771 -12.03513 -11.95101 -11.74890 -11.27989 -11.12287 -10.76730 -10.63672 -10.54162 -9.81765 -9.56600 -8.78806 -5.01791 -0.07579 0.11145 0.43294 0.50256 1.20857 1.52867 1.89884 1.91648 2.53410 2.83280 3.03086 3.21589 3.33530 3.45082 3.54906 3.65805 3.68715 3.82612 3.88892 3.97527 4.01055 4.10895 4.19579 4.24910 4.41915 4.45560 4.54757 4.60028 4.65538 4.68151 4.69853 4.79361 4.94368 4.97113 4.98045 5.08392 5.12955 5.16322 5.42650 5.57761 5.63941 5.71894 5.96671 6.10281 6.15915 6.34593 6.94437 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.062 4.062 3 Si 0.684 3.316 4 C -0.208 4.208 5 C 0.147 3.853 6 N -0.510 5.510 7 C 0.393 3.607 8 N -0.699 5.699 9 C 0.133 3.867 10 H 0.110 0.890 11 C -0.145 4.145 12 C -0.075 4.075 13 H 0.095 0.905 14 C -0.071 4.071 15 C -0.117 4.117 16 C -0.118 4.118 17 C -0.125 4.125 18 C -0.118 4.118 19 C -0.117 4.117 20 C -0.137 4.137 21 C -0.020 4.020 22 F -0.134 7.134 23 C -0.037 4.037 24 H 0.376 0.624 25 H 0.120 0.880 26 H -0.254 1.254 27 H -0.256 1.256 28 H 0.164 0.836 29 H 0.412 0.588 30 H 0.095 0.905 31 H 0.072 0.928 32 H 0.123 0.877 33 H 0.122 0.878 34 H 0.121 0.879 35 H 0.121 0.879 36 H 0.120 0.880 37 H 0.075 0.925 38 H 0.099 0.901 39 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.611 0.916 0.665 2.846 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.172 4.172 3 Si 0.585 3.415 4 C -0.213 4.213 5 C -0.011 4.011 6 N -0.227 5.227 7 C 0.155 3.845 8 N -0.331 5.331 9 C 0.027 3.973 10 H 0.128 0.872 11 C -0.184 4.184 12 C -0.093 4.093 13 H 0.113 0.887 14 C -0.071 4.071 15 C -0.135 4.135 16 C -0.136 4.136 17 C -0.143 4.143 18 C -0.136 4.136 19 C -0.136 4.136 20 C -0.176 4.176 21 C -0.047 4.047 22 F -0.113 7.113 23 C -0.063 4.063 24 H 0.224 0.776 25 H 0.138 0.862 26 H -0.179 1.179 27 H -0.181 1.181 28 H 0.180 0.820 29 H 0.250 0.750 30 H 0.114 0.886 31 H 0.091 0.909 32 H 0.141 0.859 33 H 0.140 0.860 34 H 0.139 0.861 35 H 0.140 0.860 36 H 0.138 0.862 37 H 0.094 0.906 38 H 0.118 0.882 39 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 3.042 1.974 0.875 3.731 hybrid contribution -1.694 -1.432 0.174 2.225 sum 1.348 0.542 1.050 1.792 Atomic orbital electron populations 1.86617 1.17702 1.79936 1.49357 1.24830 0.83899 1.10841 0.97668 0.95064 0.91530 0.74255 0.80681 1.20863 1.05776 0.94538 1.00109 1.22412 0.91620 0.99568 0.87459 1.67307 1.25014 1.07192 1.23178 1.18403 0.90366 0.88978 0.86742 1.44249 1.58859 1.11741 1.18249 1.21829 0.92429 0.95344 0.87674 0.87188 1.23599 1.00938 0.97409 0.96426 1.21596 0.97848 0.99183 0.90684 0.88701 1.19693 0.98523 0.94035 0.94892 1.21013 0.99225 0.97719 0.95546 1.21181 0.99854 0.98672 0.93858 1.21198 0.99514 0.93591 0.99962 1.21184 0.98723 0.98160 0.95535 1.21079 1.00456 0.98219 0.93797 1.23460 0.96882 1.01048 0.96168 1.17999 1.08649 0.79555 0.98466 1.91494 1.93653 1.31198 1.94911 1.21290 0.95520 0.94445 0.95075 0.77590 0.86228 1.17859 1.18092 0.81971 0.75029 0.88627 0.90921 0.85929 0.85987 0.86084 0.86048 0.86216 0.90587 0.88233 0.83303 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.21 12.84 -35.23 -0.45 -0.67 16 2 C -0.06 0.08 2.82 36.00 0.10 0.18 16 3 Si 0.68 -1.38 29.91 -169.99 -5.08 -6.46 16 4 C -0.21 0.09 5.36 -104.47 -0.56 -0.47 16 5 C 0.15 -0.03 9.84 -17.56 -0.17 -0.20 16 6 N -0.51 -0.72 9.13 -12.37 -0.11 -0.83 16 7 C 0.39 0.55 7.49 -154.86 -1.16 -0.61 16 8 N -0.70 0.08 5.41 -53.06 -0.29 -0.21 16 9 C 0.13 -0.11 4.35 -67.12 -0.29 -0.41 16 10 H 0.11 -0.02 7.41 -51.93 -0.38 -0.40 16 11 C -0.14 0.12 7.26 -25.92 -0.19 -0.07 16 12 C -0.07 0.07 3.85 -90.96 -0.35 -0.28 16 13 H 0.09 -0.12 8.09 -51.93 -0.42 -0.54 16 14 C -0.07 -0.03 5.29 -104.62 -0.55 -0.59 16 15 C -0.12 -0.04 8.60 -39.58 -0.34 -0.38 16 16 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 17 C -0.12 -0.09 10.05 -39.59 -0.40 -0.49 16 18 C -0.12 -0.09 10.05 -39.59 -0.40 -0.49 16 19 C -0.12 -0.09 9.71 -39.58 -0.38 -0.48 16 20 C -0.14 0.22 7.29 -25.92 -0.19 0.03 16 21 C -0.02 -0.03 7.35 -39.09 -0.29 -0.32 16 22 F -0.13 -0.28 16.65 2.25 0.04 -0.25 16 23 C -0.04 -0.02 9.82 -39.26 -0.39 -0.40 16 24 H 0.38 -0.87 8.70 45.56 0.40 -0.48 16 25 H 0.12 -0.24 7.96 -51.93 -0.41 -0.66 16 26 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 27 H -0.26 0.07 7.01 56.52 0.40 0.47 16 28 H 0.16 -0.37 4.84 -52.49 -0.25 -0.62 16 29 H 0.41 -0.42 8.17 -40.82 -0.33 -0.75 16 30 H 0.10 -0.12 6.33 -51.93 -0.33 -0.45 16 31 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 32 H 0.12 -0.15 6.68 -52.49 -0.35 -0.50 16 33 H 0.12 -0.13 8.06 -52.49 -0.42 -0.56 16 34 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 35 H 0.12 -0.09 8.06 -52.49 -0.42 -0.52 16 36 H 0.12 -0.07 8.05 -52.49 -0.42 -0.49 16 37 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 38 H 0.10 -0.18 7.71 -51.93 -0.40 -0.58 16 39 H 0.15 -0.06 8.06 -52.48 -0.42 -0.48 16 LS Contribution 329.70 15.07 4.97 4.97 Total: 0.00 -5.34 329.70 -11.54 -16.87 By element: Atomic # 1 Polarization: -3.34 SS G_CDS: -4.65 Total: -8.00 kcal Atomic # 6 Polarization: 0.52 SS G_CDS: -5.95 Total: -5.43 kcal Atomic # 7 Polarization: -0.64 SS G_CDS: -0.40 Total: -1.04 kcal Atomic # 8 Polarization: -0.21 SS G_CDS: -0.45 Total: -0.67 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.04 Total: -0.25 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.08 Total: -6.46 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -5.34 -11.54 -16.87 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9705152_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.517 kcal (2) G-P(sol) polarization free energy of solvation -5.337 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.180 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.537 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.874 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.643 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds