Wall clock time and date at job start Tue Mar 9 2021 13:50:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86304 * 109.46783 * 2 1 4 4 C 1.50695 * 109.47385 * 240.00083 * 2 1 3 5 5 C 1.37979 * 120.33113 * 119.99687 * 4 2 1 6 6 N 1.32004 * 120.90618 * 180.02562 * 5 4 2 7 7 C 1.32340 * 121.64606 * 0.02562 * 6 5 4 8 8 N 1.39139 * 119.72125 * 179.97438 * 7 6 5 9 9 C 1.46500 * 119.99926 * 359.97438 * 8 7 6 10 10 H 1.09004 * 112.85080 * 336.19727 * 9 8 7 11 11 C 1.53779 * 113.61979 * 107.50762 * 9 8 7 12 12 C 1.53774 * 87.08154 * 89.11374 * 11 9 8 13 13 H 1.08997 * 113.69339 * 270.87567 * 12 11 9 14 14 C 1.50702 * 113.61353 * 139.98641 * 12 11 9 15 15 C 1.38229 * 119.99089 * 322.75985 * 14 12 11 16 16 C 1.38259 * 120.02466 * 180.25764 * 15 14 12 17 17 C 1.38202 * 120.01288 * 359.48305 * 16 15 14 18 18 C 1.38365 * 119.98427 * 0.26295 * 17 16 15 19 19 Cl 1.73606 * 120.00959 * 179.97438 * 18 17 16 20 20 C 1.38229 * 119.99690 * 142.50490 * 14 12 11 21 21 C 1.53777 * 87.08015 * 25.43634 * 12 11 9 22 22 C 1.39347 * 120.56139 * 0.25018 * 7 6 5 23 23 F 1.35098 * 120.47030 * 179.72459 * 22 7 6 24 24 C 1.38447 * 119.05417 * 359.49841 * 22 7 6 25 25 H 0.96698 * 114.00701 * 299.99708 * 1 2 3 26 26 H 1.09000 * 109.46880 * 120.00098 * 2 1 3 27 27 H 1.48501 * 109.99634 * 178.68069 * 3 2 1 28 28 H 1.48501 * 109.99986 * 299.99565 * 3 2 1 29 29 H 1.07999 * 119.54710 * 0.04886 * 5 4 2 30 30 H 0.97000 * 120.00228 * 180.02562 * 8 7 6 31 31 H 1.09002 * 113.60946 * 334.56844 * 11 9 8 32 32 H 1.08995 * 113.61984 * 203.66851 * 11 9 8 33 33 H 1.07997 * 119.98404 * 0.02562 * 15 14 12 34 34 H 1.08002 * 119.99550 * 179.76936 * 16 15 14 35 35 H 1.07999 * 120.00653 * 180.27788 * 17 16 15 36 36 H 1.08002 * 120.00552 * 359.97438 * 20 14 12 37 37 H 1.09006 * 113.61115 * 89.11551 * 21 12 11 38 38 H 1.09005 * 113.61642 * 220.01332 * 21 12 11 39 39 H 1.08001 * 120.75257 * 180.24289 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7250 -0.0463 -2.1431 6 7 3.1709 -0.6574 -3.2249 7 6 2.8776 -1.9227 -3.4784 8 7 3.3687 -2.5271 -4.6314 9 6 4.2063 -1.7629 -5.5591 10 1 4.0460 -0.6872 -5.4862 11 6 5.6889 -2.1700 -5.5288 12 6 5.3449 -3.2076 -6.6104 13 1 5.0330 -4.1718 -6.2089 14 6 6.3960 -3.3328 -7.6830 15 6 7.0678 -2.2091 -8.1266 16 6 8.0285 -2.3223 -9.1144 17 6 8.3253 -3.5607 -9.6513 18 6 7.6569 -4.6866 -9.2039 19 17 8.0288 -6.2425 -9.8783 20 6 6.6920 -4.5719 -8.2193 21 6 4.1711 -2.2944 -7.0017 22 6 2.0763 -2.6533 -2.6032 23 9 1.7734 -3.9433 -2.8666 24 6 1.5988 -2.0397 -1.4576 25 1 -0.3934 0.4416 0.7650 26 1 1.7923 -0.5139 0.8900 27 1 3.5345 1.7703 0.0321 28 1 1.5614 2.4679 -1.2086 29 1 2.9853 0.9874 -1.9699 30 1 3.1560 -3.4542 -4.8214 31 1 6.0009 -2.6125 -4.5828 32 1 6.3640 -1.3869 -5.8740 33 1 6.8394 -1.2418 -7.7041 34 1 8.5504 -1.4435 -9.4633 35 1 9.0789 -3.6497 -10.4197 36 1 6.1703 -5.4505 -7.8694 37 1 4.4312 -1.5453 -7.7496 38 1 3.2577 -2.8374 -7.2448 39 1 0.9788 -2.5813 -0.7586 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9705208_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:50:30 Heat of formation + Delta-G solvation = 17.105038 kcal Electronic energy + Delta-G solvation = -25092.094401 eV Core-core repulsion = 21135.505411 eV Total energy + Delta-G solvation = -3956.588990 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.083 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -49.89267 -41.70387 -41.07479 -39.43761 -37.91743 -37.35915 -35.58037 -33.29148 -32.39215 -31.75184 -30.89659 -26.94739 -26.81691 -26.10010 -24.85018 -23.76107 -22.89830 -22.56106 -20.31515 -19.53439 -18.62711 -18.32152 -18.01793 -17.99874 -16.90753 -16.82346 -16.67690 -16.37298 -16.13896 -15.62978 -15.50202 -15.08045 -15.04058 -14.79426 -14.63315 -14.45559 -14.36487 -13.96414 -13.86210 -13.72978 -13.60826 -12.95586 -12.68445 -12.61643 -12.48019 -12.25180 -12.09518 -11.91128 -11.75809 -11.37291 -11.18424 -10.77711 -10.69615 -10.35687 -9.91495 -9.65583 -8.79997 -5.05896 -0.11494 0.09629 0.11677 0.21907 1.16385 1.19076 1.57293 1.85932 1.88686 2.48441 2.53800 3.01288 3.13061 3.28957 3.36736 3.52857 3.59149 3.60861 3.75823 3.80147 3.84776 3.98211 4.02359 4.05757 4.19073 4.24053 4.35864 4.44825 4.54280 4.58724 4.61361 4.65099 4.73812 4.84337 4.88414 4.92633 4.95437 5.03565 5.20263 5.30084 5.37887 5.48847 5.75172 5.92713 6.12831 6.54487 6.90487 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.059 4.059 3 Si 0.682 3.318 4 C -0.162 4.162 5 C 0.142 3.858 6 N -0.509 5.509 7 C 0.392 3.608 8 N -0.699 5.699 9 C 0.133 3.867 10 H 0.109 0.891 11 C -0.144 4.144 12 C -0.075 4.075 13 H 0.098 0.902 14 C -0.058 4.058 15 C -0.113 4.113 16 C -0.103 4.103 17 C -0.115 4.115 18 C -0.032 4.032 19 Cl -0.069 7.069 20 C -0.108 4.108 21 C -0.137 4.137 22 C -0.017 4.017 23 F -0.132 7.132 24 C -0.034 4.034 25 H 0.384 0.616 26 H 0.077 0.923 27 H -0.251 1.251 28 H -0.247 1.247 29 H 0.155 0.845 30 H 0.413 0.587 31 H 0.074 0.926 32 H 0.096 0.904 33 H 0.130 0.870 34 H 0.133 0.867 35 H 0.133 0.867 36 H 0.132 0.868 37 H 0.100 0.900 38 H 0.077 0.923 39 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.582 3.627 3.737 5.240 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.171 4.171 3 Si 0.583 3.417 4 C -0.168 4.168 5 C -0.015 4.015 6 N -0.226 5.226 7 C 0.154 3.846 8 N -0.332 5.332 9 C 0.027 3.973 10 H 0.127 0.873 11 C -0.183 4.183 12 C -0.093 4.093 13 H 0.117 0.883 14 C -0.058 4.058 15 C -0.131 4.131 16 C -0.121 4.121 17 C -0.134 4.134 18 C -0.058 4.058 19 Cl -0.040 7.040 20 C -0.127 4.127 21 C -0.175 4.175 22 C -0.043 4.043 23 F -0.111 7.111 24 C -0.060 4.060 25 H 0.232 0.768 26 H 0.095 0.905 27 H -0.176 1.176 28 H -0.171 1.171 29 H 0.171 0.829 30 H 0.251 0.749 31 H 0.093 0.907 32 H 0.115 0.885 33 H 0.148 0.852 34 H 0.151 0.849 35 H 0.151 0.849 36 H 0.150 0.850 37 H 0.119 0.881 38 H 0.096 0.904 39 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 0.649 4.279 1.959 4.751 hybrid contribution -0.497 -1.914 0.197 1.988 sum 0.152 2.365 2.155 3.203 Atomic orbital electron populations 1.86488 1.17173 1.81864 1.49819 1.24467 0.85758 1.10248 0.96603 0.95081 0.80884 0.77928 0.87848 1.19944 1.03515 0.94442 0.98850 1.22127 0.92761 0.98615 0.88016 1.67257 1.26488 1.07531 1.21293 1.18365 0.90087 0.88995 0.87199 1.44205 1.54217 1.14397 1.20361 1.21815 0.89917 0.97323 0.88253 0.87262 1.23612 0.97127 0.98666 0.98925 1.21621 0.94204 0.99180 0.94312 0.88338 1.19640 0.96858 0.92459 0.96861 1.21137 0.96216 0.98676 0.97092 1.21150 0.97574 0.97121 0.96291 1.21116 1.00162 0.91312 1.00795 1.20968 0.99414 0.87104 0.98343 1.98394 1.93839 1.27346 1.84449 1.20969 0.97316 0.98153 0.96224 1.23469 0.98306 0.99376 0.96375 1.17970 1.06606 0.81088 0.98683 1.91496 1.92051 1.33640 1.93887 1.21265 0.95846 0.94194 0.94734 0.76812 0.90540 1.17561 1.17130 0.82877 0.74944 0.90683 0.88535 0.85203 0.84883 0.84882 0.85034 0.88142 0.90392 0.83039 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.43 12.75 -35.23 -0.45 -0.02 16 2 C -0.06 0.07 2.83 36.00 0.10 0.17 16 3 Si 0.68 -1.48 29.82 -169.99 -5.07 -6.55 16 4 C -0.16 -0.26 5.43 -104.47 -0.57 -0.83 16 5 C 0.14 0.34 9.84 -17.57 -0.17 0.17 16 6 N -0.51 -1.65 9.13 -12.37 -0.11 -1.76 16 7 C 0.39 1.01 7.49 -154.86 -1.16 -0.15 16 8 N -0.70 -0.36 5.41 -53.06 -0.29 -0.64 16 9 C 0.13 -0.07 4.35 -67.12 -0.29 -0.36 16 10 H 0.11 0.06 7.41 -51.93 -0.38 -0.33 16 11 C -0.14 0.15 7.25 -25.92 -0.19 -0.04 16 12 C -0.07 0.10 3.86 -90.96 -0.35 -0.25 16 13 H 0.10 -0.16 8.09 -51.93 -0.42 -0.58 16 14 C -0.06 0.01 5.29 -104.63 -0.55 -0.55 16 15 C -0.11 0.07 8.62 -39.58 -0.34 -0.27 16 16 C -0.10 0.04 10.05 -39.59 -0.40 -0.36 16 17 C -0.12 -0.07 9.83 -39.55 -0.39 -0.46 16 18 C -0.03 -0.05 6.32 -39.50 -0.25 -0.30 16 19 Cl -0.07 -0.14 28.96 -51.86 -1.50 -1.64 16 20 C -0.11 -0.09 9.49 -39.55 -0.38 -0.47 16 21 C -0.14 0.23 7.29 -25.92 -0.19 0.04 16 22 C -0.02 -0.04 7.35 -39.09 -0.29 -0.33 16 23 F -0.13 -0.36 16.65 2.25 0.04 -0.32 16 24 C -0.03 -0.06 9.75 -39.26 -0.38 -0.45 16 25 H 0.38 -2.22 8.74 45.56 0.40 -1.82 16 26 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 27 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 28 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 29 H 0.15 0.19 4.88 -52.49 -0.26 -0.07 16 30 H 0.41 -0.26 8.17 -40.82 -0.33 -0.60 16 31 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 32 H 0.10 -0.16 6.30 -51.93 -0.33 -0.49 16 33 H 0.13 -0.30 6.64 -52.49 -0.35 -0.65 16 34 H 0.13 -0.32 8.06 -52.49 -0.42 -0.74 16 35 H 0.13 -0.07 8.06 -52.49 -0.42 -0.50 16 36 H 0.13 -0.02 8.05 -52.49 -0.42 -0.44 16 37 H 0.10 -0.21 7.73 -51.93 -0.40 -0.61 16 38 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.15 0.06 8.06 -52.49 -0.42 -0.36 16 LS Contribution 346.40 15.07 5.22 5.22 Total: 0.00 -6.20 346.40 -12.18 -18.38 By element: Atomic # 1 Polarization: -4.01 SS G_CDS: -4.22 Total: -8.23 kcal Atomic # 6 Polarization: 1.35 SS G_CDS: -5.79 Total: -4.44 kcal Atomic # 7 Polarization: -2.01 SS G_CDS: -0.40 Total: -2.41 kcal Atomic # 8 Polarization: 0.43 SS G_CDS: -0.45 Total: -0.02 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.04 Total: -0.32 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.07 Total: -6.55 kcal Atomic # 17 Polarization: -0.14 SS G_CDS: -1.50 Total: -1.64 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -6.20 -12.18 -18.38 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9705208_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.480 kcal (2) G-P(sol) polarization free energy of solvation -6.198 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.282 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.177 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.375 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.105 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds