Wall clock time and date at job start Tue Mar 9 2021 13:50:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86297 * 109.47245 * 2 1 4 4 C 1.50694 * 109.46596 * 120.00251 * 2 1 3 5 5 C 1.38605 * 120.72326 * 65.00341 * 4 2 1 6 6 N 1.32275 * 119.19757 * 180.02562 * 5 4 2 7 7 C 1.32498 * 120.74168 * 359.97438 * 6 5 4 8 8 N 1.38405 * 119.21601 * 180.02562 * 7 6 5 9 9 C 1.46496 * 119.99592 * 180.02562 * 8 7 6 10 10 H 1.09000 * 112.91246 * 23.74625 * 9 8 7 11 11 C 1.53786 * 113.61518 * 154.99866 * 9 8 7 12 12 C 1.53781 * 87.17350 * 89.15486 * 11 9 8 13 13 H 1.08996 * 113.61580 * 270.76247 * 12 11 9 14 14 C 1.50703 * 113.61417 * 139.93966 * 12 11 9 15 15 C 1.38217 * 119.99758 * 299.72794 * 14 12 11 16 16 C 1.38261 * 119.99216 * 179.78725 * 15 14 12 17 17 C 1.38208 * 120.00494 * 0.44418 * 16 15 14 18 18 C 1.38259 * 119.99961 * 359.80930 * 17 16 15 19 19 C 1.50700 * 120.00107 * 180.02562 * 18 17 16 20 20 F 1.39906 * 109.46909 * 269.97326 * 19 18 17 21 21 F 1.39895 * 109.46992 * 29.97500 * 19 18 17 22 22 F 1.39901 * 109.46993 * 149.97753 * 19 18 17 23 23 C 1.38218 * 119.99883 * 359.97438 * 18 17 16 24 24 C 1.53782 * 87.08260 * 25.39213 * 12 11 9 25 25 N 1.32494 * 121.56264 * 0.28341 * 7 6 5 26 26 C 1.32276 * 120.74155 * 359.43109 * 25 7 6 27 27 H 0.96702 * 114.00330 * 300.00316 * 1 2 3 28 28 H 1.09001 * 109.47008 * 240.00247 * 2 1 3 29 29 H 1.48500 * 110.00211 * 300.00409 * 3 2 1 30 30 H 1.48507 * 109.99609 * 61.31810 * 3 2 1 31 31 H 1.07998 * 120.39981 * 359.97438 * 5 4 2 32 32 H 0.97001 * 120.00290 * 359.97438 * 8 7 6 33 33 H 1.09002 * 113.61357 * 334.56403 * 11 9 8 34 34 H 1.09002 * 113.61608 * 203.74565 * 11 9 8 35 35 H 1.07992 * 120.00140 * 359.97438 * 15 14 12 36 36 H 1.08005 * 119.99407 * 180.27149 * 16 15 14 37 37 H 1.07999 * 119.99976 * 179.83679 * 17 16 15 38 38 H 1.07999 * 120.00045 * 180.02562 * 23 18 17 39 39 H 1.08997 * 113.61668 * 89.11298 * 24 12 11 40 40 H 1.08994 * 113.61387 * 220.02033 * 24 12 11 41 41 H 1.07995 * 120.40089 * 180.29509 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6925 -2.0634 1.4139 6 7 2.1468 -2.6566 2.5055 7 6 2.8230 -1.9724 3.4166 8 7 3.2842 -2.6249 4.5467 9 6 4.0333 -1.8849 5.5652 10 1 3.8224 -0.8156 5.5538 11 6 3.9537 -2.5135 6.9665 12 6 5.1923 -3.3402 6.5827 13 1 4.9524 -4.2900 6.1048 14 6 6.1924 -3.4838 7.7009 15 6 6.7810 -2.3603 8.2501 16 6 7.6952 -2.4919 9.2789 17 6 8.0275 -3.7473 9.7519 18 6 7.4427 -4.8715 9.1989 19 6 7.8045 -6.2403 9.7150 20 9 8.8935 -6.7385 8.9917 21 9 8.1446 -6.1532 11.0692 22 9 6.7113 -7.1000 9.5630 23 6 6.5253 -4.7397 8.1734 24 6 5.5362 -2.2181 5.5890 25 7 3.0638 -0.6773 3.2739 26 6 2.6423 -0.0252 2.2031 27 1 -0.3934 0.4417 0.7650 28 1 1.7924 -0.5138 -0.8900 29 1 1.5615 2.4679 -1.2084 30 1 1.5879 2.4585 1.2243 31 1 1.1416 -2.6263 0.6750 32 1 3.1109 -3.5720 4.6646 33 1 3.0589 -3.1154 7.1249 34 1 4.1352 -1.8044 7.7741 35 1 6.5245 -1.3796 7.8777 36 1 8.1519 -1.6137 9.7111 37 1 8.7436 -3.8502 10.5537 38 1 6.0682 -5.6178 7.7417 39 1 6.1507 -1.4272 6.0190 40 1 5.9189 -2.5816 4.6354 41 1 2.8458 1.0294 2.0902 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9705320_12175864.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:50:51 Heat of formation + Delta-G solvation = -63.825996 kcal Electronic energy + Delta-G solvation = -29536.464058 eV Core-core repulsion = 24776.293946 eV Total energy + Delta-G solvation = -4760.170112 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.114 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -51.09565 -48.61600 -48.55556 -42.19992 -41.39756 -39.58491 -38.15885 -35.67861 -34.72234 -33.10921 -32.65854 -31.57733 -27.22584 -27.06588 -26.80939 -26.20476 -25.55953 -23.54220 -23.35297 -22.55327 -20.56338 -19.70862 -19.42659 -19.29971 -19.07719 -18.47968 -18.12141 -17.46692 -16.82975 -16.62755 -16.44955 -16.21358 -16.03317 -15.74111 -15.63999 -15.43559 -15.40803 -15.06574 -14.95571 -14.77918 -14.71249 -14.67019 -14.52969 -14.39097 -14.01413 -13.86392 -13.61793 -13.47942 -13.19912 -13.03425 -12.49368 -12.26763 -12.12623 -12.02954 -11.88129 -11.76091 -11.44392 -11.24513 -10.74270 -10.32462 -10.05025 -9.93528 -9.16850 -5.05827 -0.18677 0.02273 0.10219 0.13200 1.18612 1.48457 1.68053 1.70377 1.88548 2.31090 2.72943 2.76886 3.01839 3.07766 3.28233 3.29786 3.43682 3.49901 3.52644 3.59109 3.66395 3.68163 3.71840 3.77551 3.87789 3.95071 4.07973 4.15179 4.25837 4.47805 4.50426 4.51370 4.55309 4.64902 4.69757 4.74550 4.81804 4.87907 4.95497 5.05114 5.16524 5.24771 5.36255 5.62294 5.75353 5.96991 6.31306 6.35143 7.25358 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.053 4.053 3 Si 0.680 3.320 4 C -0.291 4.291 5 C 0.224 3.776 6 N -0.569 5.569 7 C 0.570 3.430 8 N -0.678 5.678 9 C 0.136 3.864 10 H 0.112 0.888 11 C -0.137 4.137 12 C -0.076 4.076 13 H 0.101 0.899 14 C -0.071 4.071 15 C -0.085 4.085 16 C -0.116 4.116 17 C -0.075 4.075 18 C -0.179 4.179 19 C 0.507 3.493 20 F -0.176 7.176 21 F -0.176 7.176 22 F -0.177 7.177 23 C -0.067 4.067 24 C -0.144 4.144 25 N -0.561 5.561 26 C 0.198 3.802 27 H 0.376 0.624 28 H 0.120 0.880 29 H -0.253 1.253 30 H -0.257 1.257 31 H 0.171 0.829 32 H 0.415 0.585 33 H 0.079 0.921 34 H 0.101 0.899 35 H 0.134 0.866 36 H 0.137 0.863 37 H 0.136 0.864 38 H 0.135 0.865 39 H 0.097 0.903 40 H 0.076 0.924 41 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.268 3.964 -0.450 4.186 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.165 4.165 3 Si 0.581 3.419 4 C -0.299 4.299 5 C 0.056 3.944 6 N -0.290 5.290 7 C 0.214 3.786 8 N -0.314 5.314 9 C 0.030 3.970 10 H 0.130 0.870 11 C -0.175 4.175 12 C -0.094 4.094 13 H 0.119 0.881 14 C -0.071 4.071 15 C -0.103 4.103 16 C -0.134 4.134 17 C -0.093 4.093 18 C -0.181 4.181 19 C 0.453 3.547 20 F -0.157 7.157 21 F -0.158 7.158 22 F -0.158 7.158 23 C -0.086 4.086 24 C -0.183 4.183 25 N -0.282 5.282 26 C 0.030 3.970 27 H 0.223 0.777 28 H 0.138 0.862 29 H -0.178 1.178 30 H -0.182 1.182 31 H 0.188 0.812 32 H 0.253 0.747 33 H 0.097 0.903 34 H 0.119 0.881 35 H 0.152 0.848 36 H 0.155 0.845 37 H 0.154 0.846 38 H 0.153 0.847 39 H 0.115 0.885 40 H 0.095 0.905 41 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 1.587 4.064 0.003 4.363 hybrid contribution -1.284 -0.544 -0.007 1.395 sum 0.303 3.520 -0.004 3.533 Atomic orbital electron populations 1.86619 1.17751 1.79863 1.49337 1.24677 0.83766 1.10579 0.97457 0.95185 0.91474 0.74539 0.80741 1.21656 1.08987 0.97731 1.01563 1.22851 0.89096 0.90977 0.91499 1.67982 1.16556 1.40051 1.04437 1.19345 0.86910 0.85525 0.86856 1.43806 1.58027 1.11849 1.17670 1.21863 0.91081 0.97572 0.86496 0.87017 1.23479 0.97864 0.99501 0.96694 1.21642 0.94248 0.99347 0.94168 0.88112 1.19669 0.97727 0.92371 0.97337 1.21294 0.95028 0.98904 0.95028 1.21189 0.98059 0.97181 0.96936 1.20999 0.98059 0.91572 0.98651 1.19980 1.03993 0.91802 1.02297 1.18320 0.74692 0.86140 0.75518 1.93244 1.55660 1.89133 1.77689 1.93201 1.92406 1.96431 1.33734 1.93202 1.54375 1.72881 1.95353 1.20858 0.95053 0.98357 0.94290 1.23652 0.96919 0.98077 0.99640 1.67918 1.27060 1.08208 1.25059 1.22851 0.88098 0.99472 0.86587 0.77659 0.86196 1.17754 1.18235 0.81234 0.74699 0.90264 0.88072 0.84783 0.84549 0.84616 0.84738 0.88454 0.90522 0.81630 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.07 12.85 -35.23 -0.45 -0.39 16 2 C -0.05 0.09 2.83 36.00 0.10 0.19 16 3 Si 0.68 -1.58 29.95 -169.99 -5.09 -6.67 16 4 C -0.29 0.20 5.36 -104.35 -0.56 -0.35 16 5 C 0.22 0.10 10.99 -17.23 -0.19 -0.09 16 6 N -0.57 -1.19 10.46 -13.93 -0.15 -1.33 16 7 C 0.57 0.94 8.43 -322.80 -2.72 -1.78 16 8 N -0.68 0.39 5.41 -54.91 -0.30 0.09 16 9 C 0.14 -0.28 4.34 -67.02 -0.29 -0.57 16 10 H 0.11 -0.13 7.37 -51.93 -0.38 -0.52 16 11 C -0.14 0.43 7.29 -25.92 -0.19 0.24 16 12 C -0.08 0.21 3.86 -90.96 -0.35 -0.14 16 13 H 0.10 -0.30 8.09 -51.93 -0.42 -0.72 16 14 C -0.07 0.11 5.29 -104.62 -0.55 -0.45 16 15 C -0.08 0.19 8.63 -39.58 -0.34 -0.16 16 16 C -0.12 0.21 10.05 -39.58 -0.40 -0.19 16 17 C -0.07 0.04 9.40 -39.58 -0.37 -0.33 16 18 C -0.18 -0.10 5.45 -104.62 -0.57 -0.67 16 19 C 0.51 0.86 3.36 36.01 0.12 0.98 16 20 F -0.18 -0.46 17.30 2.25 0.04 -0.42 16 21 F -0.18 -0.39 16.46 2.25 0.04 -0.35 16 22 F -0.18 -0.40 16.46 2.25 0.04 -0.36 16 23 C -0.07 0.02 9.06 -39.58 -0.36 -0.34 16 24 C -0.14 0.37 7.26 -25.82 -0.19 0.19 16 25 N -0.56 -0.76 9.13 -13.93 -0.13 -0.89 16 26 C 0.20 -0.07 9.92 -17.22 -0.17 -0.24 16 27 H 0.38 -1.01 8.70 45.56 0.40 -0.62 16 28 H 0.12 -0.31 7.96 -51.93 -0.41 -0.73 16 29 H -0.25 -0.30 7.11 56.52 0.40 0.11 16 30 H -0.26 0.14 7.02 56.52 0.40 0.54 16 31 H 0.17 -0.22 8.06 -52.49 -0.42 -0.64 16 32 H 0.42 -0.62 8.82 -40.82 -0.36 -0.98 16 33 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 34 H 0.10 -0.37 7.73 -51.93 -0.40 -0.77 16 35 H 0.13 -0.56 6.64 -52.49 -0.35 -0.90 16 36 H 0.14 -0.52 8.06 -52.48 -0.42 -0.95 16 37 H 0.14 -0.21 7.60 -52.49 -0.40 -0.61 16 38 H 0.13 -0.16 7.60 -52.49 -0.40 -0.56 16 39 H 0.10 -0.34 6.30 -51.93 -0.33 -0.66 16 40 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 41 H 0.17 -0.44 5.01 -52.49 -0.26 -0.70 16 LS Contribution 357.90 15.07 5.39 5.39 Total: 0.00 -6.67 357.90 -11.85 -18.52 By element: Atomic # 1 Polarization: -5.67 SS G_CDS: -4.21 Total: -9.88 kcal Atomic # 6 Polarization: 3.32 SS G_CDS: -7.03 Total: -3.71 kcal Atomic # 7 Polarization: -1.57 SS G_CDS: -0.57 Total: -2.14 kcal Atomic # 8 Polarization: 0.07 SS G_CDS: -0.45 Total: -0.39 kcal Atomic # 9 Polarization: -1.25 SS G_CDS: 0.11 Total: -1.14 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.09 Total: -6.67 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -6.67 -11.85 -18.52 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9705320_12175864.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.305 kcal (2) G-P(sol) polarization free energy of solvation -6.674 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.979 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.847 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.521 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.826 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds