Wall clock time and date at job start Tue Mar 9 2021 13:51:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.33337 * 125.94737 * 2 1 4 4 C 1.50701 * 122.70912 * 359.97438 * 3 2 1 5 5 O 1.42896 * 109.46833 * 113.56940 * 4 3 2 6 6 Si 1.86294 * 109.46837 * 233.56835 * 4 3 2 7 7 N 1.32116 * 114.57302 * 179.97438 * 3 2 1 8 8 C 1.29685 * 116.87323 * 0.02562 * 7 3 2 9 9 N 1.38608 * 124.94909 * 179.97438 * 8 7 3 10 10 C 1.46506 * 119.99709 * 180.02562 * 9 8 7 11 11 H 1.08997 * 112.84801 * 23.80516 * 10 9 8 12 12 C 1.53777 * 113.61343 * 155.00648 * 10 9 8 13 13 C 1.53784 * 87.08402 * 89.11293 * 12 10 9 14 14 H 1.08997 * 113.61206 * 270.80070 * 13 12 10 15 15 C 1.50700 * 113.61207 * 139.97787 * 13 12 10 16 16 C 1.38214 * 119.99602 * 121.74416 * 15 13 12 17 17 C 1.38264 * 119.99860 * 180.25342 * 16 15 13 18 18 C 1.50704 * 119.99868 * 179.78844 * 17 16 15 19 19 F 1.39903 * 109.46525 * 179.72575 * 18 17 16 20 20 F 1.39898 * 109.47071 * 299.72122 * 18 17 16 21 21 F 1.39896 * 109.47240 * 59.72478 * 18 17 16 22 22 C 1.38210 * 119.99872 * 359.51242 * 17 16 15 23 23 C 1.38258 * 119.99860 * 0.27524 * 22 17 16 24 24 C 1.38209 * 120.00339 * 359.96010 * 23 22 17 25 25 C 1.53782 * 87.16882 * 25.39195 * 13 12 10 26 26 S 1.70964 * 110.10063 * 0.24375 * 8 7 3 27 27 H 1.08996 * 109.47248 * 84.88503 * 1 2 3 28 28 H 1.09004 * 109.46878 * 204.87680 * 1 2 3 29 29 H 1.08994 * 109.47544 * 324.87928 * 1 2 3 30 30 H 1.08998 * 109.47215 * 353.56930 * 4 3 2 31 31 H 0.96699 * 114.00289 * 59.99805 * 5 4 3 32 32 H 1.48497 * 110.00005 * 180.02562 * 6 4 3 33 33 H 1.48508 * 110.00154 * 301.31909 * 6 4 3 34 34 H 0.97004 * 120.00282 * 0.02562 * 9 8 7 35 35 H 1.09006 * 113.61507 * 334.56590 * 12 10 9 36 36 H 1.08997 * 113.61537 * 203.66583 * 12 10 9 37 37 H 1.07996 * 120.00328 * 0.04035 * 16 15 13 38 38 H 1.07999 * 120.00227 * 180.25701 * 22 17 16 39 39 H 1.08005 * 119.99457 * 179.97438 * 23 22 17 40 40 H 1.08002 * 120.00354 * 180.02562 * 24 23 22 41 41 H 1.08994 * 113.61863 * 89.16151 * 25 13 12 42 42 H 1.09000 * 113.61142 * 220.06095 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0794 0.0000 4 6 1.7413 2.4831 -0.0006 5 8 2.0692 3.1231 1.2343 6 14 2.4873 3.4407 -1.4137 7 7 3.5850 0.8189 0.0005 8 6 3.9315 -0.4308 0.0005 9 7 5.2385 -0.8924 0.0005 10 6 5.5067 -2.3327 -0.0002 11 1 4.6807 -2.9168 -0.4060 12 6 6.8750 -2.7042 -0.5954 13 6 7.4475 -2.5442 0.8229 14 1 7.7799 -1.5308 1.0477 15 6 8.4721 -3.5894 1.1816 16 6 9.7488 -3.2081 1.5491 17 6 10.6904 -4.1672 1.8732 18 6 12.0838 -3.7516 2.2692 19 9 12.8463 -4.8893 2.5547 20 9 12.6764 -3.0451 1.2171 21 9 12.0223 -2.9348 3.4032 22 6 10.3521 -5.5068 1.8395 23 6 9.0737 -5.8880 1.4762 24 6 8.1339 -4.9295 1.1475 25 6 6.0363 -2.8600 1.3458 26 16 2.5414 -1.4260 -0.0072 27 1 -0.3633 0.0916 -1.0235 28 1 -0.3633 -0.9324 0.4323 29 1 -0.3634 0.8405 0.5912 30 1 0.6579 2.4498 -0.1160 31 1 3.0191 3.1879 1.4035 32 1 1.9550 4.8269 -1.4250 33 1 3.9666 3.4662 -1.2850 34 1 5.9756 -0.2618 0.0009 35 1 7.2561 -1.9702 -1.3055 36 1 6.9240 -3.7253 -0.9735 37 1 10.0119 -2.1611 1.5796 38 1 11.0864 -6.2559 2.0967 39 1 8.8096 -6.9349 1.4496 40 1 7.1351 -5.2273 0.8641 41 1 5.8555 -3.9238 1.4996 42 1 5.7412 -2.2516 2.2007 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9705320_15704122.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:51:02 Heat of formation + Delta-G solvation = -80.577520 kcal Electronic energy + Delta-G solvation = -30065.187083 eV Core-core repulsion = 25303.331109 eV Total energy + Delta-G solvation = -4761.855974 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.091 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -51.13207 -48.65485 -48.58922 -41.70951 -40.94618 -39.69710 -37.58322 -35.67574 -33.33176 -32.87649 -31.99823 -28.96876 -27.23941 -26.96078 -26.55400 -25.62107 -24.43664 -23.61444 -22.85918 -20.97031 -20.45394 -19.45439 -19.35199 -19.28235 -18.77648 -17.94642 -17.67535 -17.45891 -16.90996 -16.55874 -16.27899 -16.04390 -15.71197 -15.51521 -15.45976 -15.37243 -15.10159 -15.02804 -14.83398 -14.74711 -14.65505 -14.58087 -14.18074 -14.16849 -13.89397 -13.80904 -13.70003 -13.58041 -13.48206 -13.15647 -12.85116 -12.57274 -12.34340 -12.11957 -12.06616 -11.76278 -11.55388 -11.11930 -10.65646 -10.42822 -10.37747 -10.02495 -9.99156 -8.67457 -4.86035 -0.24411 -0.01479 0.04519 0.15643 0.75852 1.33889 1.64077 1.75997 1.81202 1.87278 2.19289 2.24916 2.68822 2.97344 3.09392 3.28256 3.36377 3.39796 3.41910 3.56944 3.63230 3.65206 3.79958 3.84073 4.00805 4.03064 4.16251 4.18851 4.20310 4.39469 4.42827 4.46544 4.50329 4.64026 4.65137 4.69949 4.73539 4.81181 4.91000 4.94149 4.99741 5.10680 5.20547 5.26926 5.55864 5.57367 6.20784 6.45170 6.91468 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 C -0.241 4.241 3 C 0.074 3.926 4 C -0.036 4.036 5 O -0.526 6.526 6 Si 0.698 3.302 7 N -0.547 5.547 8 C 0.320 3.680 9 N -0.678 5.678 10 C 0.126 3.874 11 H 0.099 0.901 12 C -0.132 4.132 13 C -0.073 4.073 14 H 0.102 0.898 15 C -0.072 4.072 16 C -0.065 4.065 17 C -0.179 4.179 18 C 0.507 3.493 19 F -0.176 7.176 20 F -0.176 7.176 21 F -0.176 7.176 22 C -0.076 4.076 23 C -0.115 4.115 24 C -0.085 4.085 25 C -0.148 4.148 26 S 0.107 5.893 27 H 0.077 0.923 28 H 0.068 0.932 29 H 0.079 0.921 30 H 0.122 0.878 31 H 0.380 0.620 32 H -0.257 1.257 33 H -0.252 1.252 34 H 0.413 0.587 35 H 0.083 0.917 36 H 0.104 0.896 37 H 0.133 0.867 38 H 0.139 0.861 39 H 0.137 0.863 40 H 0.134 0.866 41 H 0.100 0.900 42 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.017 -5.059 -3.127 6.669 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C -0.364 4.364 3 C -0.056 4.056 4 C -0.149 4.149 5 O -0.332 6.332 6 Si 0.597 3.403 7 N -0.273 5.273 8 C -0.051 4.051 9 N -0.318 5.318 10 C 0.020 3.980 11 H 0.117 0.883 12 C -0.170 4.170 13 C -0.092 4.092 14 H 0.120 0.880 15 C -0.072 4.072 16 C -0.083 4.083 17 C -0.180 4.180 18 C 0.453 3.547 19 F -0.158 7.158 20 F -0.157 7.157 21 F -0.157 7.157 22 C -0.094 4.094 23 C -0.133 4.133 24 C -0.103 4.103 25 C -0.187 4.187 26 S 0.356 5.644 27 H 0.096 0.904 28 H 0.087 0.913 29 H 0.098 0.902 30 H 0.140 0.860 31 H 0.228 0.772 32 H -0.182 1.182 33 H -0.176 1.176 34 H 0.251 0.749 35 H 0.102 0.898 36 H 0.122 0.878 37 H 0.151 0.849 38 H 0.157 0.843 39 H 0.155 0.845 40 H 0.152 0.848 41 H 0.118 0.882 42 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -2.859 -5.174 -3.316 6.778 hybrid contribution 1.162 1.099 1.262 2.037 sum -1.696 -4.075 -2.055 4.868 Atomic orbital electron populations 1.20209 0.86744 1.03295 1.02971 1.25129 1.01160 0.93086 1.17032 1.19984 0.86735 0.97099 1.01810 1.24631 1.04514 0.89867 0.95841 1.86566 1.29653 1.79800 1.37185 0.94781 0.81183 0.79968 0.84364 1.66028 1.17458 1.16826 1.26971 1.23228 0.91643 0.91580 0.98673 1.43563 1.01897 1.06095 1.80223 1.21993 0.98513 0.79982 0.97552 0.88281 1.23443 0.93739 1.03688 0.96170 1.21601 0.92871 0.97945 0.96758 0.87969 1.19623 0.93793 0.94369 0.99427 1.20799 0.92283 0.99231 0.96036 1.19984 0.92677 0.96134 1.09208 1.18312 0.86551 0.74879 0.74941 1.93180 1.78136 1.50851 1.93601 1.93233 1.85802 1.79305 1.57382 1.93234 1.96666 1.73547 1.52281 1.21084 0.97585 0.94260 0.96429 1.21200 0.92593 1.00373 0.99162 1.21270 0.99890 0.92182 0.96936 1.23726 0.94406 1.02649 0.97919 1.83911 0.96384 1.10213 1.73891 0.90437 0.91280 0.90198 0.86024 0.77200 1.18181 1.17560 0.74886 0.89817 0.87770 0.84937 0.84306 0.84497 0.84845 0.88171 0.90068 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.10 9.71 36.01 0.35 0.45 16 2 C -0.24 -0.24 6.57 -36.02 -0.24 -0.47 16 3 C 0.07 0.15 5.19 -84.18 -0.44 -0.28 16 4 C -0.04 -0.05 2.84 36.01 0.10 0.05 16 5 O -0.53 -1.59 12.88 -35.23 -0.45 -2.04 16 6 Si 0.70 0.62 32.62 -169.99 -5.54 -4.92 16 7 N -0.55 -1.51 9.77 -11.36 -0.11 -1.62 16 8 C 0.32 0.33 8.24 -87.68 -0.72 -0.39 16 9 N -0.68 0.93 5.42 -54.90 -0.30 0.64 16 10 C 0.13 -0.43 4.32 -67.02 -0.29 -0.72 16 11 H 0.10 -0.36 7.05 -51.93 -0.37 -0.72 16 12 C -0.13 0.55 7.29 -25.92 -0.19 0.36 16 13 C -0.07 0.26 3.85 -90.96 -0.35 -0.10 16 14 H 0.10 -0.35 8.09 -51.93 -0.42 -0.77 16 15 C -0.07 0.15 5.29 -104.62 -0.55 -0.40 16 16 C -0.07 0.05 9.26 -39.58 -0.37 -0.32 16 17 C -0.18 -0.04 5.37 -104.62 -0.56 -0.60 16 18 C 0.51 0.75 3.32 36.01 0.12 0.87 16 19 F -0.18 -0.33 15.97 2.25 0.04 -0.29 16 20 F -0.18 -0.40 17.24 2.25 0.04 -0.36 16 21 F -0.18 -0.42 17.23 2.25 0.04 -0.38 16 22 C -0.08 0.07 9.43 -39.58 -0.37 -0.31 16 23 C -0.12 0.27 10.05 -39.58 -0.40 -0.13 16 24 C -0.08 0.24 8.54 -39.59 -0.34 -0.10 16 25 C -0.15 0.53 7.27 -25.83 -0.19 0.34 16 26 S 0.11 0.00 21.68 -107.50 -2.33 -2.33 16 27 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 28 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 29 H 0.08 -0.12 7.17 -51.93 -0.37 -0.49 16 30 H 0.12 -0.05 6.33 -51.93 -0.33 -0.38 16 31 H 0.38 0.50 8.70 45.56 0.40 0.89 16 32 H -0.26 -0.85 7.11 56.52 0.40 -0.45 16 33 H -0.25 -1.00 7.11 56.52 0.40 -0.60 16 34 H 0.41 -0.74 8.83 -40.82 -0.36 -1.10 16 35 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 36 H 0.10 -0.51 7.64 -51.93 -0.40 -0.91 16 37 H 0.13 -0.21 8.05 -52.49 -0.42 -0.63 16 38 H 0.14 -0.26 7.16 -52.49 -0.38 -0.63 16 39 H 0.14 -0.59 8.06 -52.48 -0.42 -1.02 16 40 H 0.13 -0.67 6.73 -52.49 -0.35 -1.02 16 41 H 0.10 -0.46 6.39 -51.93 -0.33 -0.79 16 42 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 LS Contribution 376.32 15.07 5.67 5.67 Total: 0.00 -6.50 376.32 -12.03 -18.53 By element: Atomic # 1 Polarization: -6.51 SS G_CDS: -4.64 Total: -11.16 kcal Atomic # 6 Polarization: 2.69 SS G_CDS: -4.43 Total: -1.74 kcal Atomic # 7 Polarization: -0.57 SS G_CDS: -0.41 Total: -0.98 kcal Atomic # 8 Polarization: -1.59 SS G_CDS: -0.45 Total: -2.04 kcal Atomic # 9 Polarization: -1.14 SS G_CDS: 0.11 Total: -1.03 kcal Atomic # 14 Polarization: 0.62 SS G_CDS: -5.54 Total: -4.92 kcal Atomic # 16 Polarization: 0.00 SS G_CDS: -2.33 Total: -2.33 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -6.50 -12.03 -18.53 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9705320_15704122.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.048 kcal (2) G-P(sol) polarization free energy of solvation -6.501 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.549 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.028 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.529 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.578 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds