Wall clock time and date at job start Tue Mar 9 2021 13:51:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.47207 * 2 1 4 4 C 1.50698 * 109.47027 * 119.99804 * 2 1 3 5 5 C 1.38603 * 120.71813 * 65.00173 * 4 2 1 6 6 N 1.32278 * 119.19692 * 179.97438 * 5 4 2 7 7 C 1.32491 * 120.74287 * 0.02562 * 6 5 4 8 8 N 1.38403 * 119.22164 * 179.97438 * 7 6 5 9 9 C 1.46498 * 120.00026 * 179.97438 * 8 7 6 10 10 H 1.08997 * 112.85240 * 23.81049 * 9 8 7 11 11 C 1.53785 * 113.61046 * 155.00344 * 9 8 7 12 12 C 1.53774 * 87.08345 * 89.11933 * 11 9 8 13 13 H 1.09007 * 113.61273 * 270.79824 * 12 11 9 14 14 C 1.50696 * 113.61825 * 139.97910 * 12 11 9 15 15 C 1.38222 * 119.97931 * 121.52249 * 14 12 11 16 16 C 1.38253 * 120.03603 * 179.70252 * 15 14 12 17 17 C 1.38304 * 120.00004 * 0.28222 * 16 15 14 18 18 Cl 1.73593 * 120.01736 * 180.02562 * 17 16 15 19 19 C 1.38487 * 119.96054 * 359.97438 * 17 16 15 20 20 Cl 1.73601 * 120.01781 * 179.97438 * 19 17 16 21 21 C 1.38251 * 119.98111 * 301.78438 * 14 12 11 22 22 C 1.53784 * 87.17399 * 25.38703 * 12 11 9 23 23 N 1.32496 * 121.56305 * 0.27017 * 7 6 5 24 24 C 1.32283 * 120.74054 * 359.44636 * 23 7 6 25 25 H 0.96706 * 114.00071 * 299.99906 * 1 2 3 26 26 H 1.09000 * 109.46983 * 239.99884 * 2 1 3 27 27 H 1.48495 * 110.00164 * 178.68187 * 3 2 1 28 28 H 1.48501 * 109.99982 * 300.00356 * 3 2 1 29 29 H 1.08006 * 120.40552 * 359.95556 * 5 4 2 30 30 H 0.97005 * 119.99769 * 0.02562 * 8 7 6 31 31 H 1.09003 * 113.61787 * 334.56282 * 11 9 8 32 32 H 1.09003 * 113.61338 * 203.67047 * 11 9 8 33 33 H 1.08002 * 119.98508 * 359.97438 * 15 14 12 34 34 H 1.07996 * 120.00018 * 180.25947 * 16 15 14 35 35 H 1.07994 * 119.99835 * 0.02562 * 21 14 12 36 36 H 1.08994 * 113.60959 * 89.16129 * 22 12 11 37 37 H 1.09000 * 113.61536 * 220.06117 * 22 12 11 38 38 H 1.08000 * 120.40554 * 180.25230 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6926 -2.0633 1.4140 6 7 2.1478 -2.6567 2.5051 7 6 2.8241 -1.9725 3.4161 8 7 3.2854 -2.6249 4.5462 9 6 4.0355 -1.8852 5.5641 10 1 3.8238 -0.8160 5.5524 11 6 3.9562 -2.5134 6.9656 12 6 5.1934 -3.3407 6.5789 13 1 4.9518 -4.2898 6.1001 14 6 6.1951 -3.4867 7.6952 15 6 6.5509 -4.7448 8.1438 16 6 7.4743 -4.8803 9.1637 17 6 8.0384 -3.7565 9.7397 18 17 9.1984 -3.9261 11.0199 19 6 7.6779 -2.4959 9.2938 20 17 8.3844 -1.0843 10.0162 21 6 6.7536 -2.3621 8.2737 22 6 5.5382 -2.2194 5.5845 23 7 3.0643 -0.6773 3.2738 24 6 2.6418 -0.0249 2.2034 25 1 -0.3933 0.4417 0.7651 26 1 1.7923 -0.5139 -0.8900 27 1 3.5346 1.7703 0.0321 28 1 1.5615 2.4679 -1.2085 29 1 1.1413 -2.6262 0.6753 30 1 3.1126 -3.5722 4.6638 31 1 3.0610 -3.1147 7.1246 32 1 4.1399 -1.8045 7.7729 33 1 6.1105 -5.6226 7.6943 34 1 7.7550 -5.8637 9.5109 35 1 6.4717 -1.3794 7.9259 36 1 6.1552 -1.4300 6.0136 37 1 5.9184 -2.5837 4.6302 38 1 2.8441 1.0300 2.0910 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_9750036_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:51:51 Heat of formation + Delta-G solvation = 77.430367 kcal Electronic energy + Delta-G solvation = -24703.554745 eV Core-core repulsion = 20793.809930 eV Total energy + Delta-G solvation = -3909.744815 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.049 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.15874 -41.29377 -39.58293 -37.98772 -37.57358 -37.48688 -35.45957 -34.71903 -32.51145 -31.95099 -31.24972 -26.98554 -26.69954 -26.11214 -25.54451 -24.07127 -23.27145 -22.65503 -20.33953 -19.58583 -18.64031 -18.33899 -17.96798 -17.14044 -16.71783 -16.57503 -16.28448 -16.10490 -15.81952 -15.67375 -15.30544 -15.19302 -14.96438 -14.61035 -14.51567 -14.09154 -13.87365 -13.54298 -13.46614 -13.14890 -12.95053 -12.90006 -12.54819 -12.26201 -12.23659 -12.04798 -11.89295 -11.81881 -11.77983 -11.72494 -11.26633 -11.12113 -10.51640 -10.03466 -9.99501 -9.61709 -9.09548 -4.98611 -0.13082 0.04686 0.05721 0.13991 0.79432 1.18950 1.33283 1.65490 1.79298 2.00470 2.34816 2.78972 3.15379 3.44006 3.53513 3.57550 3.63272 3.66251 3.70547 3.73652 3.81220 3.93884 4.05333 4.10172 4.24551 4.26268 4.27560 4.57213 4.61788 4.70435 4.76869 4.79306 4.83944 4.88999 4.99368 5.02033 5.04576 5.14985 5.34088 5.46195 5.58238 5.80745 6.06151 6.40699 6.80045 7.27642 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.047 4.047 3 Si 0.767 3.233 4 C -0.288 4.288 5 C 0.212 3.788 6 N -0.590 5.590 7 C 0.555 3.445 8 N -0.673 5.673 9 C 0.136 3.864 10 H 0.104 0.896 11 C -0.127 4.127 12 C -0.067 4.067 13 H 0.115 0.885 14 C -0.051 4.051 15 C -0.097 4.097 16 C -0.100 4.100 17 C -0.054 4.054 18 Cl -0.063 7.063 19 C -0.043 4.043 20 Cl -0.060 7.060 21 C -0.099 4.099 22 C -0.143 4.143 23 N -0.574 5.574 24 C 0.195 3.805 25 H 0.395 0.605 26 H 0.113 0.887 27 H -0.284 1.284 28 H -0.297 1.297 29 H 0.181 0.819 30 H 0.419 0.581 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.162 0.838 34 H 0.156 0.844 35 H 0.155 0.845 36 H 0.101 0.899 37 H 0.064 0.936 38 H 0.189 0.811 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.107 0.188 -0.200 3.119 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.159 4.159 3 Si 0.673 3.327 4 C -0.296 4.296 5 C 0.044 3.956 6 N -0.312 5.312 7 C 0.198 3.802 8 N -0.309 5.309 9 C 0.030 3.970 10 H 0.122 0.878 11 C -0.165 4.165 12 C -0.085 4.085 13 H 0.133 0.867 14 C -0.052 4.052 15 C -0.115 4.115 16 C -0.118 4.118 17 C -0.081 4.081 18 Cl -0.034 7.034 19 C -0.070 4.070 20 Cl -0.031 7.031 21 C -0.117 4.117 22 C -0.182 4.182 23 N -0.297 5.297 24 C 0.028 3.972 25 H 0.245 0.755 26 H 0.130 0.870 27 H -0.211 1.211 28 H -0.225 1.225 29 H 0.198 0.802 30 H 0.258 0.742 31 H 0.104 0.896 32 H 0.125 0.875 33 H 0.180 0.820 34 H 0.173 0.827 35 H 0.173 0.827 36 H 0.119 0.881 37 H 0.082 0.918 38 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges -1.938 0.193 0.026 1.947 hybrid contribution 0.227 -0.494 -0.677 0.868 sum -1.710 -0.301 -0.650 1.854 Atomic orbital electron populations 1.86484 1.17204 1.82073 1.50469 1.24788 0.85126 1.10055 0.95882 0.93990 0.77873 0.75199 0.85594 1.21762 1.08572 0.97469 1.01776 1.23131 0.89221 0.91699 0.91505 1.67991 1.17430 1.40611 1.05154 1.19609 0.87299 0.85868 0.87425 1.43871 1.57713 1.12048 1.17281 1.21888 0.90955 0.97281 0.86907 0.87771 1.23433 0.97790 0.99352 0.95923 1.21662 0.93756 0.99813 0.93305 0.86724 1.19914 0.96606 0.92175 0.96464 1.21475 0.96090 0.98450 0.95486 1.21319 0.96438 0.97796 0.96294 1.21037 0.97590 0.94003 0.95468 1.98401 1.57773 1.97980 1.49210 1.20942 1.00101 0.87023 0.98968 1.98404 1.83009 1.39117 1.82558 1.21062 0.95247 1.01118 0.94289 1.23632 0.96795 0.98504 0.99237 1.67951 1.27499 1.08318 1.25912 1.23185 0.87587 1.00209 0.86202 0.75528 0.86955 1.21114 1.22502 0.80211 0.74245 0.89584 0.87534 0.82026 0.82655 0.82739 0.88119 0.91754 0.79465 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.59 12.85 -148.98 -1.91 -0.32 16 2 C -0.05 0.17 2.83 71.24 0.20 0.37 16 3 Si 0.77 -3.73 29.88 68.60 2.05 -1.68 16 4 C -0.29 0.48 5.36 -19.69 -0.11 0.38 16 5 C 0.21 0.20 10.99 84.71 0.93 1.13 16 6 N -0.59 -2.46 10.46 -197.98 -2.07 -4.53 16 7 C 0.55 1.75 8.43 261.49 2.20 3.96 16 8 N -0.67 1.19 5.41 -327.65 -1.77 -0.58 16 9 C 0.14 -0.63 4.34 45.58 0.20 -0.43 16 10 H 0.10 -0.26 7.36 -2.39 -0.02 -0.28 16 11 C -0.13 0.99 7.29 31.12 0.23 1.22 16 12 C -0.07 0.50 3.85 -11.02 -0.04 0.46 16 13 H 0.11 -1.07 8.09 -2.38 -0.02 -1.09 16 14 C -0.05 0.23 5.29 -19.87 -0.11 0.13 16 15 C -0.10 0.46 9.71 22.27 0.22 0.68 16 16 C -0.10 0.18 9.83 22.29 0.22 0.40 16 17 C -0.05 -0.12 6.32 22.34 0.14 0.02 16 18 Cl -0.06 -0.27 27.96 -2.72 -0.08 -0.34 16 19 C -0.04 -0.09 6.32 22.34 0.14 0.05 16 20 Cl -0.06 -0.23 27.96 -2.72 -0.08 -0.30 16 21 C -0.10 0.21 8.31 22.29 0.19 0.40 16 22 C -0.14 0.75 7.27 31.18 0.23 0.98 16 23 N -0.57 -1.45 9.13 -197.98 -1.81 -3.26 16 24 C 0.20 -0.26 9.92 84.71 0.84 0.58 16 25 H 0.39 -4.12 8.70 -74.05 -0.64 -4.76 16 26 H 0.11 -0.35 7.96 -2.39 -0.02 -0.37 16 27 H -0.28 -0.03 7.11 99.48 0.71 0.68 16 28 H -0.30 -0.92 7.11 99.48 0.71 -0.21 16 29 H 0.18 -0.43 8.06 -2.91 -0.02 -0.45 16 30 H 0.42 -1.71 8.82 -92.70 -0.82 -2.53 16 31 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 32 H 0.11 -0.89 7.62 -2.39 -0.02 -0.90 16 33 H 0.16 -1.58 8.05 -2.91 -0.02 -1.61 16 34 H 0.16 -0.77 8.06 -2.91 -0.02 -0.79 16 35 H 0.16 -0.79 6.73 -2.91 -0.02 -0.81 16 36 H 0.10 -0.60 6.41 -2.39 -0.02 -0.62 16 37 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 38 H 0.19 -1.33 5.07 -2.91 -0.01 -1.35 16 Total: 0.00 -16.21 351.13 -0.47 -16.68 By element: Atomic # 1 Polarization: -15.70 SS G_CDS: -0.28 Total: -15.98 kcal Atomic # 6 Polarization: 4.85 SS G_CDS: 5.48 Total: 10.33 kcal Atomic # 7 Polarization: -2.72 SS G_CDS: -5.65 Total: -8.37 kcal Atomic # 8 Polarization: 1.59 SS G_CDS: -1.91 Total: -0.32 kcal Atomic # 14 Polarization: -3.73 SS G_CDS: 2.05 Total: -1.68 kcal Atomic # 17 Polarization: -0.49 SS G_CDS: -0.15 Total: -0.64 kcal Total: -16.21 -0.47 -16.68 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9750036_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.106 kcal (2) G-P(sol) polarization free energy of solvation -16.207 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.899 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.469 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.676 kcal (6) G-S(sol) free energy of system = (1) + (5) 77.430 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds