Wall clock time and date at job start Tue Mar 9 2021 13:51:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.47384 * 2 1 4 4 C 1.50700 * 109.47252 * 240.00128 * 2 1 3 5 5 C 1.33330 * 125.94911 * 300.00358 * 4 2 1 6 6 N 1.32124 * 114.58023 * 179.69557 * 5 4 2 7 7 C 1.29687 * 116.86524 * 0.26640 * 6 5 4 8 8 N 1.38608 * 124.95273 * 180.02562 * 7 6 5 9 9 C 1.46502 * 119.99645 * 0.02562 * 8 7 6 10 10 H 1.09003 * 112.85081 * 336.19657 * 9 8 7 11 11 C 1.53779 * 113.61211 * 107.50566 * 9 8 7 12 12 C 1.53786 * 87.08267 * 89.11630 * 11 9 8 13 13 H 1.09004 * 113.68964 * 270.87715 * 12 11 9 14 14 C 1.50697 * 113.61642 * 139.97953 * 12 11 9 15 15 C 1.38224 * 119.98049 * 142.50160 * 14 12 11 16 16 C 1.38244 * 120.03869 * 179.97438 * 15 14 12 17 17 C 1.38309 * 119.99848 * 0.02562 * 16 15 14 18 18 Cl 1.73601 * 120.01903 * 179.97438 * 17 16 15 19 19 C 1.38488 * 119.96093 * 0.02562 * 17 16 15 20 20 Cl 1.73596 * 120.01653 * 179.97438 * 19 17 16 21 21 C 1.38248 * 119.98110 * 322.22639 * 14 12 11 22 22 C 1.53779 * 113.61196 * 205.00536 * 9 8 7 23 23 S 1.70969 * 110.10172 * 0.02562 * 7 6 5 24 24 H 0.96705 * 113.99847 * 59.99949 * 1 2 3 25 25 H 1.08999 * 109.46926 * 120.00536 * 2 1 3 26 26 H 1.48497 * 110.00285 * 298.68263 * 3 2 1 27 27 H 1.48507 * 109.99803 * 60.00020 * 3 2 1 28 28 H 1.08002 * 122.71398 * 359.96801 * 5 4 2 29 29 H 0.97005 * 119.99929 * 180.02562 * 8 7 6 30 30 H 1.08997 * 113.61080 * 203.65915 * 11 9 8 31 31 H 1.08999 * 113.61522 * 334.56720 * 11 9 8 32 32 H 1.07997 * 119.97841 * 0.02562 * 15 14 12 33 33 H 1.07999 * 119.99953 * 179.97438 * 16 15 14 34 34 H 1.08003 * 119.99733 * 0.02562 * 21 14 12 35 35 H 1.08997 * 113.61935 * 25.42766 * 22 9 8 36 36 H 1.09002 * 113.61821 * 156.33874 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.6834 -1.9788 -1.5580 6 7 2.2328 -2.3705 -2.6940 7 6 2.9375 -1.4924 -3.3376 8 7 3.5854 -1.7218 -4.5413 9 6 3.5006 -3.0378 -5.1795 10 1 3.2809 -3.8378 -4.4725 11 6 2.6094 -3.0584 -6.4326 12 6 3.8672 -2.6901 -7.2372 13 1 4.0316 -1.6162 -7.3257 14 6 3.9712 -3.4089 -8.5576 15 6 4.4727 -2.7507 -9.6647 16 6 4.5691 -3.4091 -10.8765 17 6 4.1632 -4.7271 -10.9816 18 17 4.2834 -5.5542 -12.5031 19 6 3.6597 -5.3862 -9.8725 20 17 3.1491 -7.0402 -10.0030 21 6 3.5703 -4.7281 -8.6595 22 6 4.6837 -3.3475 -6.1118 23 16 2.9509 -0.0105 -2.4851 24 1 -0.3933 0.4417 -0.7651 25 1 1.7923 -0.5139 0.8899 26 1 1.5880 2.4586 -1.2242 27 1 1.5615 2.4678 1.2086 28 1 1.0786 -2.6320 -0.9466 29 1 4.0948 -1.0110 -4.9611 30 1 2.2129 -4.0455 -6.6700 31 1 1.8450 -2.2815 -6.4375 32 1 4.7902 -1.7217 -9.5828 33 1 4.9607 -2.8940 -11.7412 34 1 3.1823 -5.2430 -7.7930 35 1 5.5937 -2.8040 -5.8579 36 1 4.8542 -4.4136 -6.2617 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_9750036_15704118.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:51:57 Heat of formation + Delta-G solvation = 67.771218 kcal Electronic energy + Delta-G solvation = -23103.596501 eV Core-core repulsion = 19348.010991 eV Total energy + Delta-G solvation = -3755.585510 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.010 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.51187 -40.62405 -39.49911 -38.00015 -37.57933 -37.48975 -35.21491 -32.00799 -31.91960 -30.98780 -26.94926 -26.67639 -26.14060 -24.60281 -23.97987 -22.87383 -21.30696 -20.13700 -19.51602 -18.57697 -18.11407 -17.21541 -17.02735 -16.62518 -16.46796 -16.33626 -15.91528 -15.71241 -15.38736 -15.17811 -15.04974 -14.90450 -14.55314 -13.92964 -13.83437 -13.57661 -13.46504 -12.95777 -12.91758 -12.90383 -12.53108 -12.44853 -12.26664 -12.06936 -12.00364 -11.80501 -11.71347 -11.25966 -11.08641 -10.86533 -10.28564 -10.18045 -9.99688 -9.61439 -8.71814 -5.02909 -0.13108 -0.04672 0.03796 0.04826 0.68053 0.79192 1.19045 1.26651 1.55670 1.90032 1.97982 2.17316 2.35076 3.38846 3.41826 3.54527 3.60656 3.67852 3.71897 3.92569 3.93607 4.06021 4.10660 4.26290 4.27811 4.58050 4.60463 4.72128 4.72395 4.78628 4.80440 4.87544 4.97287 5.02289 5.04645 5.09372 5.26164 5.45726 5.59102 5.89298 6.19538 6.44729 7.03614 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.023 4.023 3 Si 0.725 3.275 4 C -0.307 4.307 5 C 0.103 3.897 6 N -0.577 5.577 7 C 0.317 3.683 8 N -0.666 5.666 9 C 0.135 3.865 10 H 0.090 0.910 11 C -0.145 4.145 12 C -0.065 4.065 13 H 0.123 0.877 14 C -0.052 4.052 15 C -0.094 4.094 16 C -0.100 4.100 17 C -0.054 4.054 18 Cl -0.063 7.063 19 C -0.044 4.044 20 Cl -0.062 7.062 21 C -0.101 4.101 22 C -0.126 4.126 23 S 0.119 5.881 24 H 0.386 0.614 25 H 0.134 0.866 26 H -0.266 1.266 27 H -0.277 1.277 28 H 0.176 0.824 29 H 0.426 0.574 30 H 0.094 0.906 31 H 0.068 0.932 32 H 0.167 0.833 33 H 0.157 0.843 34 H 0.151 0.849 35 H 0.092 0.908 36 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.586 5.024 0.198 6.805 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.136 4.136 3 Si 0.627 3.373 4 C -0.430 4.430 5 C -0.048 4.048 6 N -0.304 5.304 7 C -0.053 4.053 8 N -0.306 5.306 9 C 0.027 3.973 10 H 0.108 0.892 11 C -0.184 4.184 12 C -0.083 4.083 13 H 0.141 0.859 14 C -0.052 4.052 15 C -0.112 4.112 16 C -0.118 4.118 17 C -0.081 4.081 18 Cl -0.034 7.034 19 C -0.072 4.072 20 Cl -0.033 7.033 21 C -0.119 4.119 22 C -0.165 4.165 23 S 0.368 5.632 24 H 0.235 0.765 25 H 0.152 0.848 26 H -0.191 1.191 27 H -0.202 1.202 28 H 0.193 0.807 29 H 0.266 0.734 30 H 0.112 0.888 31 H 0.087 0.913 32 H 0.184 0.816 33 H 0.175 0.825 34 H 0.169 0.831 35 H 0.111 0.889 36 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 4.826 5.608 0.125 7.400 hybrid contribution -1.692 -1.120 -0.528 2.096 sum 3.135 4.488 -0.403 5.489 Atomic orbital electron populations 1.86592 1.18250 1.80259 1.50005 1.24279 0.82971 1.10381 0.95926 0.94423 0.90514 0.73198 0.79143 1.25628 1.13148 0.99068 1.05114 1.21429 0.97737 0.93693 0.91919 1.66473 1.18178 1.34687 1.11014 1.23930 0.94957 0.93797 0.92654 1.43718 1.54013 1.14602 1.18235 1.21834 0.97318 0.84589 0.93541 0.89171 1.23607 0.96669 1.02967 0.95182 1.21685 0.97133 1.00487 0.88960 0.85893 1.19928 0.96442 0.92621 0.96211 1.21490 0.97495 1.01640 0.90592 1.21341 0.98931 0.91239 1.00318 1.21050 1.05177 0.94828 0.87052 1.98402 1.96681 1.78690 1.29650 1.20949 1.03782 0.87383 0.95042 1.98404 1.89313 1.17265 1.98330 1.21061 1.00282 0.94979 0.95627 1.23428 0.97305 1.02705 0.93027 1.83828 1.50569 1.12513 1.16254 0.76466 0.84843 1.19109 1.20243 0.80693 0.73405 0.88774 0.91324 0.81599 0.82544 0.83150 0.88932 0.88128 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.01 12.87 -148.98 -1.92 -2.93 16 2 C -0.02 0.02 2.99 71.24 0.21 0.24 16 3 Si 0.72 -1.56 31.05 68.60 2.13 0.57 16 4 C -0.31 -0.11 5.74 24.58 0.14 0.03 16 5 C 0.10 0.34 11.22 83.54 0.94 1.28 16 6 N -0.58 -2.79 9.83 -202.02 -1.99 -4.77 16 7 C 0.32 0.09 8.09 179.32 1.45 1.54 16 8 N -0.67 3.42 5.42 -327.89 -1.78 1.64 16 9 C 0.14 -0.70 4.44 45.52 0.20 -0.49 16 10 H 0.09 -0.06 7.66 -2.39 -0.02 -0.08 16 11 C -0.15 0.83 7.25 31.12 0.23 1.06 16 12 C -0.06 0.58 3.86 -11.01 -0.04 0.54 16 13 H 0.12 -1.54 8.09 -2.39 -0.02 -1.56 16 14 C -0.05 0.28 5.29 -19.87 -0.11 0.17 16 15 C -0.09 0.58 9.71 22.27 0.22 0.79 16 16 C -0.10 0.27 9.83 22.29 0.22 0.48 16 17 C -0.05 -0.11 6.32 22.35 0.14 0.03 16 18 Cl -0.06 -0.26 27.96 -2.72 -0.08 -0.34 16 19 C -0.04 -0.09 6.32 22.34 0.14 0.05 16 20 Cl -0.06 -0.27 27.96 -2.72 -0.08 -0.34 16 21 C -0.10 0.21 8.38 22.29 0.19 0.39 16 22 C -0.13 1.12 7.29 31.12 0.23 1.34 16 23 S 0.12 -0.27 20.57 -56.49 -1.16 -1.43 16 24 H 0.39 -1.28 8.70 -74.05 -0.64 -1.92 16 25 H 0.13 -0.41 7.96 -2.39 -0.02 -0.43 16 26 H -0.27 -0.37 7.11 99.48 0.71 0.33 16 27 H -0.28 -1.19 7.11 99.48 0.71 -0.48 16 28 H 0.18 0.34 8.06 -2.91 -0.02 0.32 16 29 H 0.43 -4.40 8.83 -92.70 -0.82 -5.22 16 30 H 0.09 -0.48 6.32 -2.39 -0.02 -0.50 16 31 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 32 H 0.17 -1.97 8.05 -2.91 -0.02 -1.99 16 33 H 0.16 -0.92 8.06 -2.91 -0.02 -0.95 16 34 H 0.15 -0.63 6.67 -2.91 -0.02 -0.65 16 35 H 0.09 -0.98 8.14 -2.39 -0.02 -1.00 16 36 H 0.10 -0.82 7.71 -2.39 -0.02 -0.83 16 Total: 0.00 -14.38 349.02 -0.98 -15.36 By element: Atomic # 1 Polarization: -14.95 SS G_CDS: -0.27 Total: -15.22 kcal Atomic # 6 Polarization: 3.31 SS G_CDS: 4.15 Total: 7.46 kcal Atomic # 7 Polarization: 0.63 SS G_CDS: -3.76 Total: -3.13 kcal Atomic # 8 Polarization: -1.01 SS G_CDS: -1.92 Total: -2.93 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: 2.13 Total: 0.57 kcal Atomic # 16 Polarization: -0.27 SS G_CDS: -1.16 Total: -1.43 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -0.15 Total: -0.68 kcal Total: -14.38 -0.98 -15.36 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9750036_15704118.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 83.129 kcal (2) G-P(sol) polarization free energy of solvation -14.379 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.749 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.978 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.358 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.771 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds