Wall clock time and date at job start Tue Mar 9 2021 13:52:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86299 * 109.46774 * 2 1 4 4 C 1.50704 * 109.47473 * 240.00058 * 2 1 3 5 5 C 1.37976 * 120.32566 * 120.01738 * 4 2 1 6 6 N 1.32013 * 120.89878 * 179.70364 * 5 4 2 7 7 C 1.32343 * 121.64449 * 0.56934 * 6 5 4 8 8 N 1.39140 * 119.71566 * 179.71028 * 7 6 5 9 9 C 1.46506 * 120.00046 * 359.72948 * 8 7 6 10 10 H 1.08992 * 112.90684 * 336.24929 * 9 8 7 11 11 C 1.54049 * 113.61276 * 107.62018 * 9 8 7 12 12 C 1.53781 * 87.08031 * 89.07129 * 11 9 8 13 13 H 1.08999 * 113.61181 * 270.87794 * 12 11 9 14 14 C 1.50698 * 113.61565 * 139.97986 * 12 11 9 15 15 C 1.38216 * 119.98241 * 142.50521 * 14 12 11 16 16 C 1.38253 * 120.03954 * 179.97438 * 15 14 12 17 17 C 1.38309 * 119.99867 * 359.97438 * 16 15 14 18 18 Cl 1.73595 * 120.02006 * 180.02562 * 17 16 15 19 19 C 1.38485 * 119.95957 * 0.02562 * 17 16 15 20 20 Cl 1.73597 * 120.01838 * 180.02562 * 19 17 16 21 21 C 1.38255 * 119.97637 * 322.21922 * 14 12 11 22 22 C 1.53781 * 87.08070 * 25.42738 * 12 11 9 23 23 C 1.39339 * 120.56416 * 359.43421 * 7 6 5 24 24 F 1.35093 * 120.47246 * 180.25291 * 23 7 6 25 25 C 1.38449 * 119.05528 * 0.27904 * 23 7 6 26 26 H 0.96693 * 114.00485 * 299.99654 * 1 2 3 27 27 H 1.08997 * 109.47074 * 119.99792 * 2 1 3 28 28 H 1.48505 * 109.99607 * 178.67936 * 3 2 1 29 29 H 1.48497 * 110.00430 * 299.99712 * 3 2 1 30 30 H 1.07998 * 119.55698 * 359.97438 * 5 4 2 31 31 H 0.97002 * 120.00066 * 179.72733 * 8 7 6 32 32 H 1.09005 * 113.62125 * 334.52173 * 11 9 8 33 33 H 1.09003 * 113.61268 * 203.61961 * 11 9 8 34 34 H 1.07997 * 119.98256 * 359.95119 * 15 14 12 35 35 H 1.07998 * 120.00064 * 180.02562 * 16 15 14 36 36 H 1.07999 * 120.00002 * 0.02562 * 21 14 12 37 37 H 1.09002 * 113.61445 * 89.11830 * 22 12 11 38 38 H 1.09002 * 113.61408 * 219.93560 * 22 12 11 39 39 H 1.07999 * 120.75389 * 180.02562 * 25 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.7254 -0.0464 -2.1429 6 7 3.1765 -0.6593 -3.2215 7 6 2.8795 -1.9234 -3.4772 8 7 3.3719 -2.5282 -4.6295 9 6 4.2104 -1.7641 -5.5567 10 1 4.0513 -0.6883 -5.4845 11 6 5.6952 -2.1738 -5.5265 12 6 5.3496 -3.2110 -6.6081 13 1 5.0367 -4.1742 -6.2051 14 6 6.4004 -3.3374 -7.6809 15 6 6.6944 -4.5769 -8.2171 16 6 7.6578 -4.6941 -9.2018 17 6 8.3275 -3.5706 -9.6512 18 17 9.5368 -3.7171 -10.8881 19 6 8.0328 -2.3287 -9.1140 20 17 8.8720 -0.9174 -9.6775 21 6 7.0654 -2.2125 -8.1324 22 6 4.1768 -2.2965 -6.9991 23 6 2.0826 -2.6555 -2.5994 24 9 1.7848 -3.9473 -2.8597 25 6 1.5999 -2.0401 -1.4570 26 1 -0.3934 0.4416 0.7650 27 1 1.7923 -0.5138 0.8900 28 1 3.5345 1.7703 0.0322 29 1 1.5614 2.4679 -1.2085 30 1 2.9850 0.9876 -1.9701 31 1 3.1601 -3.4556 -4.8190 32 1 6.0069 -2.6167 -4.5806 33 1 6.3711 -1.3915 -5.8719 34 1 6.1717 -5.4544 -7.8664 35 1 7.8868 -5.6629 -9.6206 36 1 6.8321 -1.2438 -7.7160 37 1 4.4375 -1.5477 -7.7470 38 1 3.2631 -2.8384 -7.2433 39 1 0.9803 -2.5818 -0.7577 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9750036_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:52:06 Heat of formation + Delta-G solvation = 11.186150 kcal Electronic energy + Delta-G solvation = -27075.565123 eV Core-core repulsion = 22758.919678 eV Total energy + Delta-G solvation = -4316.645445 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.044 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -49.91605 -41.76777 -41.16898 -39.63793 -37.95875 -37.53569 -37.46890 -35.58629 -33.30441 -32.24882 -32.02973 -30.93520 -26.98285 -26.85715 -26.13652 -24.93724 -24.07142 -22.92770 -22.69658 -20.42692 -19.57872 -18.69060 -18.51397 -18.13907 -18.02271 -17.22755 -16.91747 -16.84425 -16.53185 -16.31056 -15.80637 -15.52906 -15.29562 -15.09891 -15.02318 -14.93235 -14.66062 -14.39575 -14.01808 -13.98773 -13.85068 -13.69814 -13.50373 -13.00385 -12.88681 -12.69217 -12.51480 -12.32571 -12.10214 -12.06754 -11.83787 -11.82205 -11.43682 -11.22621 -10.79210 -10.71659 -10.36902 -10.06434 -9.66176 -8.82588 -5.06487 -0.18884 -0.13124 -0.04185 0.08209 0.81501 1.18173 1.18324 1.56732 1.83161 1.87836 2.25577 2.47078 2.99194 3.10521 3.25806 3.30931 3.41809 3.50998 3.52622 3.59403 3.74142 3.78392 3.89762 3.93076 4.01899 4.10773 4.18468 4.22891 4.42922 4.45550 4.53835 4.59396 4.62852 4.67384 4.78522 4.81199 4.87041 4.89683 4.93556 5.01813 5.28381 5.36712 5.45041 5.89592 6.10230 6.53489 6.88383 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.059 4.059 3 Si 0.682 3.318 4 C -0.162 4.162 5 C 0.142 3.858 6 N -0.509 5.509 7 C 0.391 3.609 8 N -0.700 5.700 9 C 0.133 3.867 10 H 0.110 0.890 11 C -0.146 4.146 12 C -0.075 4.075 13 H 0.103 0.897 14 C -0.053 4.053 15 C -0.100 4.100 16 C -0.095 4.095 17 C -0.037 4.037 18 Cl -0.047 7.047 19 C -0.028 4.028 20 Cl -0.046 7.046 21 C -0.098 4.098 22 C -0.138 4.138 23 C -0.017 4.017 24 F -0.132 7.132 25 C -0.034 4.034 26 H 0.384 0.616 27 H 0.077 0.923 28 H -0.251 1.251 29 H -0.247 1.247 30 H 0.155 0.845 31 H 0.413 0.587 32 H 0.076 0.924 33 H 0.096 0.904 34 H 0.138 0.862 35 H 0.144 0.856 36 H 0.143 0.857 37 H 0.100 0.900 38 H 0.079 0.921 39 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.450 0.418 4.947 5.537 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.171 4.171 3 Si 0.582 3.418 4 C -0.167 4.167 5 C -0.015 4.015 6 N -0.225 5.225 7 C 0.153 3.847 8 N -0.332 5.332 9 C 0.027 3.973 10 H 0.128 0.872 11 C -0.185 4.185 12 C -0.094 4.094 13 H 0.121 0.879 14 C -0.054 4.054 15 C -0.118 4.118 16 C -0.114 4.114 17 C -0.064 4.064 18 Cl -0.018 7.018 19 C -0.055 4.055 20 Cl -0.017 7.017 21 C -0.116 4.116 22 C -0.176 4.176 23 C -0.043 4.043 24 F -0.111 7.111 25 C -0.060 4.060 26 H 0.232 0.768 27 H 0.095 0.905 28 H -0.175 1.175 29 H -0.171 1.171 30 H 0.171 0.829 31 H 0.251 0.749 32 H 0.095 0.905 33 H 0.114 0.886 34 H 0.156 0.844 35 H 0.161 0.839 36 H 0.161 0.839 37 H 0.119 0.881 38 H 0.098 0.902 39 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -1.057 1.334 3.067 3.508 hybrid contribution -0.346 -1.628 0.101 1.667 sum -1.402 -0.293 3.168 3.477 Atomic orbital electron populations 1.86487 1.17164 1.81865 1.49829 1.24469 0.85767 1.10252 0.96596 0.95068 0.80906 0.77926 0.87875 1.19951 1.03493 0.94438 0.98795 1.22135 0.92707 0.98609 0.88059 1.67264 1.26323 1.07570 1.21363 1.18360 0.90123 0.89026 0.87173 1.44186 1.54205 1.14346 1.20469 1.21855 0.89805 0.97432 0.88186 0.87158 1.23678 0.97243 0.98593 0.98950 1.21652 0.94066 0.99474 0.94176 0.87916 1.19741 0.96490 0.92462 0.96700 1.21156 0.97044 0.97708 0.95883 1.21094 0.95590 0.97612 0.97073 1.20846 0.96256 0.93566 0.95748 1.98413 1.53719 1.98132 1.51559 1.20788 0.98068 0.87716 0.98946 1.98415 1.76616 1.38405 1.88261 1.20896 0.94887 1.00057 0.95780 1.23481 0.98265 0.99337 0.96506 1.17963 1.06696 0.80953 0.98702 1.91493 1.92174 1.33463 1.93948 1.21267 0.95796 0.94183 0.94800 0.76801 0.90521 1.17547 1.17116 0.82859 0.74949 0.90504 0.88561 0.84388 0.83851 0.83892 0.88116 0.90227 0.83030 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.51 12.75 -35.23 -0.45 0.06 16 2 C -0.06 0.08 2.83 36.01 0.10 0.18 16 3 Si 0.68 -1.53 29.82 -169.99 -5.07 -6.60 16 4 C -0.16 -0.23 5.43 -104.47 -0.57 -0.80 16 5 C 0.14 0.31 9.84 -17.57 -0.17 0.14 16 6 N -0.51 -1.51 9.13 -12.37 -0.11 -1.62 16 7 C 0.39 0.85 7.49 -154.86 -1.16 -0.31 16 8 N -0.70 0.05 5.42 -52.92 -0.29 -0.24 16 9 C 0.13 -0.14 4.37 -66.97 -0.29 -0.43 16 10 H 0.11 0.02 7.41 -51.93 -0.38 -0.36 16 11 C -0.15 0.23 7.26 -25.78 -0.19 0.05 16 12 C -0.08 0.18 3.86 -90.96 -0.35 -0.17 16 13 H 0.10 -0.32 8.09 -51.93 -0.42 -0.74 16 14 C -0.05 0.06 5.29 -104.62 -0.55 -0.49 16 15 C -0.10 0.13 9.71 -39.58 -0.38 -0.26 16 16 C -0.09 0.03 9.83 -39.55 -0.39 -0.36 16 17 C -0.04 -0.05 6.32 -39.46 -0.25 -0.30 16 18 Cl -0.05 -0.09 27.96 -51.86 -1.45 -1.54 16 19 C -0.03 -0.04 6.32 -39.46 -0.25 -0.29 16 20 Cl -0.05 -0.09 27.96 -51.86 -1.45 -1.54 16 21 C -0.10 0.03 8.38 -39.55 -0.33 -0.30 16 22 C -0.14 0.33 7.28 -25.92 -0.19 0.14 16 23 C -0.02 -0.04 7.35 -39.09 -0.29 -0.32 16 24 F -0.13 -0.29 16.65 2.25 0.04 -0.26 16 25 C -0.03 -0.05 9.75 -39.26 -0.38 -0.44 16 26 H 0.38 -2.27 8.74 45.56 0.40 -1.87 16 27 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 28 H -0.25 -0.01 7.11 56.52 0.40 0.40 16 29 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 30 H 0.15 0.17 4.88 -52.49 -0.26 -0.09 16 31 H 0.41 -0.56 8.17 -40.82 -0.33 -0.90 16 32 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.10 -0.19 6.32 -51.93 -0.33 -0.52 16 34 H 0.14 -0.46 8.05 -52.49 -0.42 -0.88 16 35 H 0.14 -0.27 8.06 -52.49 -0.42 -0.69 16 36 H 0.14 -0.23 6.67 -52.49 -0.35 -0.58 16 37 H 0.10 -0.26 7.71 -51.93 -0.40 -0.66 16 38 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 39 H 0.15 0.02 8.06 -52.49 -0.42 -0.41 16 LS Contribution 361.63 15.07 5.45 5.45 Total: 0.00 -6.32 361.63 -12.77 -19.09 By element: Atomic # 1 Polarization: -5.03 SS G_CDS: -3.80 Total: -8.83 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -5.64 Total: -3.97 kcal Atomic # 7 Polarization: -1.46 SS G_CDS: -0.40 Total: -1.86 kcal Atomic # 8 Polarization: 0.51 SS G_CDS: -0.45 Total: 0.06 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.04 Total: -0.26 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.07 Total: -6.60 kcal Atomic # 17 Polarization: -0.18 SS G_CDS: -2.90 Total: -3.08 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -6.32 -12.77 -19.09 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9750036_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.277 kcal (2) G-P(sol) polarization free energy of solvation -6.316 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.961 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.775 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.091 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.186 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds