Wall clock time and date at job start Tue Mar 9 2021 13:52:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.42901 * 114.00060 * 2 1 4 4 H 1.09000 * 112.84619 * 341.19805 * 3 2 1 5 5 C 1.53778 * 113.68767 * 112.46625 * 3 2 1 6 6 C 1.53791 * 87.07824 * 139.99172 * 5 3 2 7 7 H 1.08993 * 113.68748 * 89.12568 * 6 5 3 8 8 N 1.46502 * 113.61102 * 220.01919 * 6 5 3 9 9 C 1.38408 * 119.99469 * 252.49522 * 8 6 5 10 10 N 1.32494 * 119.21229 * 180.02562 * 9 8 6 11 11 C 1.32282 * 120.74101 * 179.97438 * 10 9 8 12 12 C 1.38604 * 119.19157 * 0.02562 * 11 10 9 13 13 C 1.50711 * 120.71576 * 180.02562 * 12 11 10 14 14 O 1.42896 * 109.47004 * 244.97554 * 13 12 11 15 15 Si 1.86299 * 109.47132 * 4.98098 * 13 12 11 16 16 C 1.38603 * 118.56551 * 359.97438 * 12 11 10 17 17 N 1.32281 * 119.19194 * 0.02562 * 16 12 11 18 18 C 1.53778 * 87.08067 * 334.56512 * 6 5 3 19 19 H 1.08997 * 109.46764 * 59.99421 * 1 2 3 20 20 H 1.08994 * 109.47416 * 180.02562 * 1 2 3 21 21 H 1.09005 * 109.46463 * 300.00136 * 1 2 3 22 22 H 1.08991 * 113.61718 * 25.44435 * 5 3 2 23 23 H 1.08999 * 113.61299 * 254.53850 * 5 3 2 24 24 H 0.96994 * 120.00176 * 72.50138 * 8 6 5 25 25 H 1.07992 * 120.39987 * 179.97438 * 11 10 9 26 26 H 1.09006 * 109.46390 * 124.97677 * 13 12 11 27 27 H 0.96698 * 114.00063 * 60.00754 * 14 13 12 28 28 H 1.48502 * 110.00208 * 58.67814 * 15 13 12 29 29 H 1.48500 * 109.99897 * 179.97438 * 15 13 12 30 30 H 1.07993 * 120.40362 * 179.97438 * 16 12 11 31 31 H 1.08999 * 113.61734 * 139.97880 * 18 6 5 32 32 H 1.08995 * 113.61782 * 270.80244 * 18 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 1 1.3138 2.0788 -0.3237 5 6 2.7532 1.6510 1.3013 6 6 3.8222 2.3198 0.4209 7 1 3.6223 3.3707 0.2117 8 7 5.1930 2.0817 0.8794 9 6 5.9128 3.1058 1.4701 10 7 7.1516 2.8734 1.8786 11 6 7.8670 3.8302 2.4465 12 6 7.3053 5.0865 2.6121 13 6 8.0895 6.2018 3.2543 14 8 7.4697 6.5711 4.4878 15 14 9.8313 5.6277 3.5818 16 6 6.0072 5.2951 2.1734 17 7 5.3468 4.2950 1.6136 18 6 3.3757 1.3718 -0.7046 19 1 -0.3633 0.5139 -0.8899 20 1 -0.3634 -1.0276 0.0005 21 1 -0.3632 0.5139 0.8900 22 1 3.1170 0.7771 1.8417 23 1 2.2134 2.3502 1.9398 24 1 5.5962 1.2065 0.7690 25 1 8.8760 3.6347 2.7778 26 1 8.1103 7.0628 2.5860 27 1 7.4167 5.8520 5.1320 28 1 10.4762 5.2107 2.3108 29 1 10.6152 6.7187 4.2145 30 1 5.5403 6.2622 2.2880 31 1 3.3382 1.8457 -1.6855 32 1 3.9105 0.4222 -0.7135 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9984032_12175864.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:52:09 Heat of formation + Delta-G solvation = 16.918485 kcal Electronic energy + Delta-G solvation = -16538.598327 eV Core-core repulsion = 13695.589094 eV Total energy + Delta-G solvation = -2843.009234 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 238.110 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -42.09329 -40.57955 -38.20196 -37.48916 -35.10330 -34.66360 -32.00641 -27.92275 -26.93982 -26.66269 -25.92493 -24.50223 -22.98466 -21.07312 -19.28403 -18.98779 -18.13819 -17.53474 -16.83427 -16.59786 -16.25676 -16.05628 -15.87522 -15.48133 -15.40638 -14.78392 -14.54901 -14.07224 -13.71286 -13.53067 -13.19890 -12.79405 -12.39227 -12.24613 -12.11002 -11.93179 -11.81989 -11.70905 -11.22539 -10.59203 -10.50373 -10.00422 -9.08790 -5.10649 0.07492 0.17091 1.22765 1.56842 1.78492 1.92854 2.81728 2.83442 3.17603 3.41008 3.42097 3.49916 3.59351 3.71841 3.78380 3.79878 3.82164 4.19922 4.24989 4.41326 4.43039 4.48865 4.65572 4.68475 4.74309 4.77695 4.87840 4.93618 4.97977 5.30424 5.77922 6.05091 6.20169 6.40993 6.51499 7.30465 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.065 3.935 4 H 0.093 0.907 5 C -0.169 4.169 6 C 0.141 3.859 7 H 0.123 0.877 8 N -0.681 5.681 9 C 0.568 3.432 10 N -0.566 5.566 11 C 0.202 3.798 12 C -0.295 4.295 13 C -0.045 4.045 14 O -0.541 6.541 15 Si 0.680 3.320 16 C 0.223 3.777 17 N -0.566 5.566 18 C -0.146 4.146 19 H 0.043 0.957 20 H 0.087 0.913 21 H 0.043 0.957 22 H 0.094 0.906 23 H 0.076 0.924 24 H 0.416 0.584 25 H 0.167 0.833 26 H 0.115 0.885 27 H 0.379 0.621 28 H -0.255 1.255 29 H -0.251 1.251 30 H 0.170 0.830 31 H 0.082 0.918 32 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.231 -0.690 0.691 1.571 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.006 3.994 4 H 0.111 0.889 5 C -0.208 4.208 6 C 0.035 3.965 7 H 0.141 0.859 8 N -0.317 5.317 9 C 0.212 3.788 10 N -0.287 5.287 11 C 0.034 3.966 12 C -0.304 4.304 13 C -0.158 4.158 14 O -0.346 6.346 15 Si 0.581 3.419 16 C 0.054 3.946 17 N -0.288 5.288 18 C -0.184 4.184 19 H 0.062 0.938 20 H 0.105 0.895 21 H 0.062 0.938 22 H 0.112 0.888 23 H 0.094 0.906 24 H 0.254 0.746 25 H 0.183 0.817 26 H 0.133 0.867 27 H 0.226 0.774 28 H -0.180 1.180 29 H -0.175 1.175 30 H 0.187 0.813 31 H 0.101 0.899 32 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -1.034 -0.897 -0.292 1.400 hybrid contribution 0.012 0.785 -0.037 0.786 sum -1.022 -0.112 -0.329 1.080 Atomic orbital electron populations 1.22831 0.80744 1.03071 1.00130 1.87947 1.20008 1.26854 1.94558 1.23427 0.93674 0.85797 0.96516 0.88917 1.24058 0.97498 1.01467 0.97811 1.22236 0.79223 1.00570 0.94495 0.85911 1.44134 1.13725 1.11071 1.62750 1.19422 0.85486 0.86556 0.87348 1.67901 1.06833 1.35779 1.18198 1.22748 0.97973 0.87238 0.88648 1.21707 0.99401 0.98309 1.10962 1.24695 1.05876 0.97934 0.87281 1.86507 1.82817 1.40515 1.24747 0.94994 0.74902 0.86498 0.85487 1.22853 0.89517 0.96722 0.85481 1.67982 1.38577 1.00206 1.22080 1.23662 0.95699 1.00558 0.98503 0.93802 0.89467 0.93848 0.88788 0.90550 0.74577 0.81672 0.86728 0.77357 1.17992 1.17520 0.81303 0.89927 0.88441 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.57 10.72 -35.23 -0.38 -0.95 16 3 C 0.06 -0.03 4.31 -25.92 -0.11 -0.14 16 4 H 0.09 -0.16 7.87 -51.93 -0.41 -0.57 16 5 C -0.17 0.03 7.71 -25.92 -0.20 -0.17 16 6 C 0.14 -0.04 4.25 -67.11 -0.29 -0.32 16 7 H 0.12 0.03 7.37 -51.93 -0.38 -0.35 16 8 N -0.68 -0.54 5.50 -55.00 -0.30 -0.85 16 9 C 0.57 1.50 8.42 -322.81 -2.72 -1.22 16 10 N -0.57 -1.45 10.46 -13.93 -0.15 -1.59 16 11 C 0.20 0.08 9.92 -17.22 -0.17 -0.09 16 12 C -0.30 0.03 5.36 -104.35 -0.56 -0.53 16 13 C -0.05 0.05 2.83 36.01 0.10 0.16 16 14 O -0.54 0.40 12.85 -35.23 -0.45 -0.05 16 15 Si 0.68 -1.26 29.88 -169.99 -5.08 -6.34 16 16 C 0.22 0.20 10.99 -17.22 -0.19 0.01 16 17 N -0.57 -1.41 9.13 -13.93 -0.13 -1.54 16 18 C -0.15 0.14 7.66 -25.92 -0.20 -0.06 16 19 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 20 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 21 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 22 H 0.09 0.07 8.14 -51.93 -0.42 -0.36 16 23 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 24 H 0.42 -0.09 8.84 -40.82 -0.36 -0.45 16 25 H 0.17 -0.38 5.07 -52.49 -0.27 -0.64 16 26 H 0.12 -0.12 7.96 -51.93 -0.41 -0.54 16 27 H 0.38 -1.64 8.70 45.56 0.40 -1.24 16 28 H -0.26 -0.15 7.11 56.52 0.40 0.25 16 29 H -0.25 -0.37 7.11 56.52 0.40 0.04 16 30 H 0.17 -0.16 8.06 -52.49 -0.42 -0.59 16 31 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.10 -0.07 8.12 -51.93 -0.42 -0.49 16 LS Contribution 275.90 15.07 4.16 4.16 Total: 0.00 -6.35 275.90 -9.58 -15.93 By element: Atomic # 1 Polarization: -3.47 SS G_CDS: -4.01 Total: -7.48 kcal Atomic # 6 Polarization: 1.95 SS G_CDS: -3.24 Total: -1.29 kcal Atomic # 7 Polarization: -3.40 SS G_CDS: -0.58 Total: -3.98 kcal Atomic # 8 Polarization: -0.17 SS G_CDS: -0.83 Total: -1.00 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: -5.08 Total: -6.34 kcal Total LS contribution 4.16 Total: 4.16 kcal Total: -6.35 -9.58 -15.93 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9984032_12175864.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.846 kcal (2) G-P(sol) polarization free energy of solvation -6.349 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.497 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.578 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.928 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.918 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds