Wall clock time and date at job start Tue Mar 9 2021 13:52:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.42906 * 114.00514 * 2 1 4 4 H 1.09002 * 112.84486 * 18.80138 * 3 2 1 5 5 C 1.53778 * 113.61764 * 149.99519 * 3 2 1 6 6 C 1.53773 * 87.08111 * 139.98301 * 5 3 2 7 7 H 1.09002 * 113.61444 * 89.20067 * 6 5 3 8 8 N 1.46506 * 113.61686 * 220.02018 * 6 5 3 9 9 C 1.39141 * 120.00029 * 203.47192 * 8 6 5 10 10 N 1.32333 * 119.72021 * 359.97438 * 9 8 6 11 11 C 1.32006 * 121.64762 * 179.97438 * 10 9 8 12 12 C 1.37983 * 120.90192 * 0.02562 * 11 10 9 13 13 C 1.50695 * 120.32919 * 180.02562 * 12 11 10 14 14 O 1.42899 * 109.47154 * 245.00179 * 13 12 11 15 15 Si 1.86302 * 109.47012 * 4.99968 * 13 12 11 16 16 C 1.38906 * 119.34530 * 359.97438 * 12 11 10 17 17 C 1.38446 * 118.48724 * 359.74264 * 16 12 11 18 18 F 1.35091 * 120.47397 * 180.26869 * 17 16 12 19 19 C 1.53781 * 87.17302 * 334.61035 * 6 5 3 20 20 H 1.09005 * 109.46886 * 60.00092 * 1 2 3 21 21 H 1.08992 * 109.47389 * 179.97438 * 1 2 3 22 22 H 1.08999 * 109.47336 * 300.00285 * 1 2 3 23 23 H 1.09000 * 113.61172 * 25.43452 * 5 3 2 24 24 H 1.09003 * 113.61642 * 254.53708 * 5 3 2 25 25 H 0.97005 * 119.99527 * 23.46811 * 8 6 5 26 26 H 1.07997 * 119.54974 * 179.97438 * 11 10 9 27 27 H 1.08997 * 109.47520 * 124.99778 * 13 12 11 28 28 H 0.96698 * 114.00105 * 59.99986 * 14 13 12 29 29 H 1.48500 * 109.99914 * 58.68055 * 15 13 12 30 30 H 1.48508 * 110.00121 * 180.02562 * 15 13 12 31 31 H 1.08004 * 120.75730 * 180.02562 * 16 12 11 32 32 H 1.09005 * 113.61233 * 139.93740 * 19 6 5 33 33 H 1.08999 * 113.61553 * 270.83930 * 19 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 1 1.3138 2.0789 0.3237 5 6 3.3755 1.3719 0.7046 6 6 3.8228 2.3180 -0.4221 7 1 3.6236 3.3693 -0.2142 8 7 5.1936 2.0785 -0.8802 9 6 5.9067 3.0974 -1.5040 10 7 5.3412 4.2807 -1.6811 11 6 5.9828 5.2741 -2.2676 12 6 7.2760 5.1130 -2.7210 13 6 7.9964 6.2560 -3.3882 14 8 8.2573 5.9229 -4.7531 15 14 6.9361 7.7861 -3.3143 16 6 7.9076 3.8869 -2.5554 17 6 7.2125 2.8650 -1.9315 18 9 7.7900 1.6581 -1.7447 19 6 2.7534 1.6510 -1.3032 20 1 -0.3633 0.5138 -0.8900 21 1 -0.3634 -1.0276 -0.0005 22 1 -0.3634 0.5139 0.8899 23 1 3.9087 0.4212 0.7139 24 1 3.3383 1.8470 1.6849 25 1 5.6040 1.2094 -0.7485 26 1 5.4884 6.2258 -2.3950 27 1 8.9388 6.4419 -2.8731 28 1 7.4620 5.7443 -5.2734 29 1 6.6312 8.1249 -1.9010 30 1 7.6352 8.9207 -3.9696 31 1 8.9195 3.7357 -2.9013 32 1 2.2147 2.3513 -1.9416 33 1 3.1162 0.7769 -1.8439 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9984032_17656566.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:52:18 Heat of formation + Delta-G solvation = -45.284572 kcal Electronic energy + Delta-G solvation = -18657.038903 eV Core-core repulsion = 15407.304277 eV Total energy + Delta-G solvation = -3249.734625 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 255.106 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -49.85825 -41.49660 -40.48057 -38.17553 -37.40426 -35.07342 -33.18359 -31.20783 -27.90662 -26.90163 -26.58568 -25.53221 -23.88899 -22.84317 -21.05946 -19.24303 -18.79775 -18.32596 -17.74237 -17.40732 -16.96040 -16.76022 -16.18015 -16.08551 -15.97213 -15.55184 -15.36017 -14.91391 -14.72955 -14.32361 -13.99419 -13.59828 -13.52487 -13.50889 -12.82697 -12.60154 -12.38283 -12.11284 -12.07692 -11.88915 -11.22744 -10.68263 -10.66793 -10.50000 -10.45984 -8.76264 -5.10004 -0.06811 0.11853 1.21693 1.57686 1.92088 1.92794 2.54323 2.82983 3.06278 3.27896 3.41324 3.42193 3.50794 3.58539 3.78945 3.81577 3.83675 3.99796 4.25426 4.39281 4.41626 4.42944 4.46704 4.65369 4.68748 4.70138 4.74305 4.89605 4.93796 4.97955 5.04762 5.42151 5.94884 6.15800 6.22354 6.52091 6.94384 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.376 6.376 3 C 0.064 3.936 4 H 0.093 0.907 5 C -0.147 4.147 6 C 0.138 3.862 7 H 0.122 0.878 8 N -0.704 5.704 9 C 0.391 3.609 10 N -0.513 5.513 11 C 0.149 3.851 12 C -0.211 4.211 13 C -0.055 4.055 14 O -0.540 6.540 15 Si 0.684 3.316 16 C -0.037 4.037 17 C -0.020 4.020 18 F -0.133 7.133 19 C -0.169 4.169 20 H 0.043 0.957 21 H 0.087 0.913 22 H 0.043 0.957 23 H 0.096 0.904 24 H 0.082 0.918 25 H 0.414 0.586 26 H 0.163 0.837 27 H 0.115 0.885 28 H 0.380 0.620 29 H -0.254 1.254 30 H -0.251 1.251 31 H 0.149 0.851 32 H 0.076 0.924 33 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.779 1.162 -0.266 3.962 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.005 3.995 4 H 0.111 0.889 5 C -0.185 4.185 6 C 0.033 3.967 7 H 0.140 0.860 8 N -0.336 5.336 9 C 0.153 3.847 10 N -0.229 5.229 11 C -0.008 4.008 12 C -0.216 4.216 13 C -0.166 4.166 14 O -0.346 6.346 15 Si 0.585 3.415 16 C -0.063 4.063 17 C -0.047 4.047 18 F -0.112 7.112 19 C -0.208 4.208 20 H 0.062 0.938 21 H 0.105 0.895 22 H 0.062 0.938 23 H 0.114 0.886 24 H 0.100 0.900 25 H 0.251 0.749 26 H 0.180 0.820 27 H 0.132 0.868 28 H 0.227 0.773 29 H -0.178 1.178 30 H -0.176 1.176 31 H 0.167 0.833 32 H 0.095 0.905 33 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -4.140 2.023 0.587 4.645 hybrid contribution 1.372 -0.934 0.062 1.661 sum -2.768 1.089 0.649 3.045 Atomic orbital electron populations 1.22825 0.80760 1.03056 1.00122 1.87945 1.19999 1.26921 1.94559 1.23476 0.93656 0.85751 0.96569 0.88936 1.23653 0.95776 1.00548 0.98557 1.22196 0.79785 1.00394 0.94374 0.86025 1.44540 1.14390 1.12259 1.62373 1.18449 0.86800 0.88672 0.90762 1.67262 1.36840 0.98877 1.19966 1.22307 0.90537 0.96381 0.91582 1.20925 0.96611 0.96953 1.07101 1.24860 1.05110 1.02516 0.84146 1.86515 1.36384 1.92209 1.19455 0.94894 0.86284 0.76552 0.83724 1.21289 1.00583 0.90814 0.93651 1.18006 0.92717 0.83718 1.10230 1.91493 1.84159 1.41633 1.93923 1.24080 0.97564 1.01447 0.97743 0.93840 0.89496 0.93816 0.88599 0.89964 0.74858 0.82024 0.86750 0.77295 1.17849 1.17589 0.83329 0.90495 0.88925 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.57 10.72 -35.23 -0.38 -0.95 16 3 C 0.06 -0.03 4.31 -25.83 -0.11 -0.14 16 4 H 0.09 -0.18 7.87 -51.93 -0.41 -0.59 16 5 C -0.15 0.15 7.66 -25.92 -0.20 -0.05 16 6 C 0.14 -0.08 4.24 -67.12 -0.28 -0.36 16 7 H 0.12 -0.03 7.45 -51.93 -0.39 -0.42 16 8 N -0.70 -0.23 5.51 -53.06 -0.29 -0.52 16 9 C 0.39 0.65 7.49 -154.86 -1.16 -0.51 16 10 N -0.51 -0.73 9.15 -12.37 -0.11 -0.85 16 11 C 0.15 -0.04 9.83 -17.57 -0.17 -0.22 16 12 C -0.21 0.06 5.36 -104.47 -0.56 -0.50 16 13 C -0.05 0.06 2.82 36.00 0.10 0.16 16 14 O -0.54 0.27 12.84 -35.23 -0.45 -0.18 16 15 Si 0.68 -1.39 29.83 -169.99 -5.07 -6.46 16 16 C -0.04 -0.03 9.82 -39.26 -0.39 -0.41 16 17 C -0.02 -0.04 7.35 -39.09 -0.29 -0.32 16 18 F -0.13 -0.33 16.65 2.25 0.04 -0.30 16 19 C -0.17 0.07 7.73 -25.83 -0.20 -0.13 16 20 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 21 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 22 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 23 H 0.10 -0.06 8.11 -51.93 -0.42 -0.48 16 24 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 25 H 0.41 -0.20 8.18 -40.82 -0.33 -0.53 16 26 H 0.16 -0.46 4.91 -52.49 -0.26 -0.71 16 27 H 0.12 -0.09 7.96 -51.93 -0.41 -0.50 16 28 H 0.38 -1.63 8.70 45.56 0.40 -1.24 16 29 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 30 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 31 H 0.15 -0.01 8.06 -52.48 -0.42 -0.43 16 32 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.09 0.06 8.14 -51.93 -0.42 -0.36 16 LS Contribution 286.46 15.07 4.32 4.32 Total: 0.00 -5.70 286.46 -8.10 -13.79 By element: Atomic # 1 Polarization: -3.45 SS G_CDS: -3.98 Total: -7.43 kcal Atomic # 6 Polarization: 0.74 SS G_CDS: -2.16 Total: -1.42 kcal Atomic # 7 Polarization: -0.96 SS G_CDS: -0.41 Total: -1.37 kcal Atomic # 8 Polarization: -0.30 SS G_CDS: -0.83 Total: -1.13 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.30 kcal Atomic # 14 Polarization: -1.39 SS G_CDS: -5.07 Total: -6.46 kcal Total LS contribution 4.32 Total: 4.32 kcal Total: -5.70 -8.10 -13.79 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9984032_17656566.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.491 kcal (2) G-P(sol) polarization free energy of solvation -5.698 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.189 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.096 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.794 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.285 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds