Wall clock time and date at job start Tue Mar 9 2021 14:04:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86302 * 109.47102 * 2 1 4 4 C 1.50699 * 109.47302 * 240.00000 * 2 1 3 5 5 C 1.38244 * 119.97478 * 104.97748 * 4 2 1 6 6 C 1.38289 * 120.11514 * 180.02562 * 5 4 2 7 7 C 1.38144 * 120.06836 * 359.76229 * 6 5 4 8 8 C 1.38723 * 119.95677 * 0.51297 * 7 6 5 9 9 O 1.35917 * 120.05778 * 179.74499 * 8 7 6 10 10 C 1.42903 * 117.00359 * 359.71887 * 9 8 7 11 11 C 1.52990 * 109.47168 * 180.02562 * 10 9 8 12 12 H 1.09000 * 112.90908 * 43.75570 * 11 10 9 13 13 C 1.53786 * 113.61464 * 175.00198 * 11 10 9 14 14 C 1.53781 * 87.17350 * 140.02626 * 13 11 10 15 15 H 1.09003 * 113.61462 * 89.16045 * 14 13 11 16 16 O 1.42897 * 113.61404 * 219.97824 * 14 13 11 17 17 C 1.53781 * 87.08070 * 334.52830 * 14 13 11 18 18 C 1.38237 * 119.97818 * 284.99657 * 4 2 1 19 19 Br 1.89099 * 120.03414 * 359.95722 * 18 4 2 20 20 H 0.96699 * 113.99977 * 60.00393 * 1 2 3 21 21 H 1.09000 * 109.47355 * 119.99694 * 2 1 3 22 22 H 1.48506 * 109.99913 * 298.68046 * 3 2 1 23 23 H 1.48504 * 110.00372 * 59.99715 * 3 2 1 24 24 H 1.07993 * 119.94606 * 0.02562 * 5 4 2 25 25 H 1.07998 * 119.96481 * 180.02562 * 6 5 4 26 26 H 1.08001 * 120.02250 * 180.25385 * 7 6 5 27 27 H 1.09007 * 109.46427 * 60.00513 * 10 9 8 28 28 H 1.08994 * 109.47177 * 300.00821 * 10 9 8 29 29 H 1.09002 * 113.61357 * 25.43543 * 13 11 10 30 30 H 1.09002 * 113.61608 * 254.61705 * 13 11 10 31 31 H 0.96698 * 113.99781 * 179.97438 * 16 14 13 32 32 H 1.09005 * 113.61471 * 139.98321 * 17 14 13 33 33 H 1.09003 * 113.61469 * 270.88099 * 17 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.4534 0.0175 -2.2835 6 6 2.9147 -0.6314 -3.4142 7 6 2.8596 -2.0095 -3.4923 8 6 2.3311 -2.7425 -2.4397 9 8 2.2711 -4.0981 -2.5166 10 6 2.7647 -4.7026 -3.7137 11 6 2.6149 -6.2221 -3.6170 12 1 1.6501 -6.5285 -3.2128 13 6 3.0056 -6.9630 -4.9068 14 6 3.6596 -8.0255 -4.0078 15 1 2.9803 -8.8248 -3.7114 16 8 4.9046 -8.5137 -4.5114 17 6 3.8139 -6.9212 -2.9488 18 6 1.8695 -2.0893 -1.3055 19 35 1.1560 -3.0846 0.1353 20 1 -0.3933 0.4416 -0.7651 21 1 1.7924 -0.5138 0.8900 22 1 1.5879 2.4586 -1.2243 23 1 1.5615 2.4680 1.2085 24 1 2.5010 1.0946 -2.2230 25 1 3.3225 -0.0604 -4.2352 26 1 3.2239 -2.5158 -4.3740 27 1 3.8169 -4.4483 -3.8419 28 1 2.1955 -4.3353 -4.5676 29 1 3.7173 -6.4166 -5.5256 30 1 2.1514 -7.3353 -5.4723 31 1 5.3210 -9.1820 -3.9501 32 1 3.6114 -7.2595 -1.9325 33 1 4.7467 -6.3634 -3.0323 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_34_10910592_11354860.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:04:57 Heat of formation + Delta-G solvation = -54.786940 kcal Electronic energy + Delta-G solvation = -18384.145039 eV Core-core repulsion = 15231.341582 eV Total energy + Delta-G solvation = -3152.803457 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.019 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -41.51715 -40.34722 -39.07631 -37.40123 -36.01621 -33.49271 -32.04223 -30.38119 -29.04807 -26.89220 -26.73945 -23.89311 -23.56569 -22.05734 -20.60764 -19.22139 -18.59783 -18.01234 -17.25621 -17.17908 -17.06228 -16.32958 -16.18432 -15.71525 -15.35422 -14.88862 -14.68501 -14.21603 -14.13822 -13.74156 -13.47035 -13.15513 -12.95246 -12.59011 -12.49262 -12.28944 -12.02721 -11.87776 -11.71243 -11.65420 -11.22930 -11.00813 -10.76490 -10.64080 -9.90218 -9.30665 -4.91611 -0.05467 0.18269 0.70714 1.24703 1.57897 1.90649 2.03563 2.44794 3.26026 3.37931 3.43979 3.52657 3.54951 3.77074 3.82776 3.93413 3.96374 4.05793 4.21340 4.23976 4.32050 4.38909 4.45272 4.65071 4.70026 4.74263 4.78743 4.96804 4.97156 5.09648 5.14254 5.28994 5.35151 5.56146 6.21066 6.48480 6.85196 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.098 4.098 3 Si 0.783 3.217 4 C -0.058 4.058 5 C -0.157 4.157 6 C -0.053 4.053 7 C -0.202 4.202 8 C 0.143 3.857 9 O -0.316 6.316 10 C 0.067 3.933 11 C -0.106 4.106 12 H 0.103 0.897 13 C -0.118 4.118 14 C 0.073 3.927 15 H 0.096 0.904 16 O -0.580 6.580 17 C -0.162 4.162 18 C -0.129 4.129 19 Br -0.048 7.048 20 H 0.385 0.615 21 H 0.113 0.887 22 H -0.263 1.263 23 H -0.302 1.302 24 H 0.156 0.844 25 H 0.167 0.833 26 H 0.157 0.843 27 H 0.076 0.924 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.088 0.912 31 H 0.395 0.605 32 H 0.071 0.929 33 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.517 0.915 -3.907 5.336 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.205 4.205 3 Si 0.686 3.314 4 C -0.060 4.060 5 C -0.175 4.175 6 C -0.071 4.071 7 C -0.222 4.222 8 C 0.095 3.905 9 O -0.229 6.229 10 C -0.008 4.008 11 C -0.124 4.124 12 H 0.121 0.879 13 C -0.155 4.155 14 C 0.015 3.985 15 H 0.113 0.887 16 O -0.389 6.389 17 C -0.200 4.200 18 C -0.210 4.210 19 Br 0.038 6.962 20 H 0.234 0.766 21 H 0.131 0.869 22 H -0.189 1.189 23 H -0.230 1.230 24 H 0.173 0.827 25 H 0.184 0.816 26 H 0.174 0.826 27 H 0.094 0.906 28 H 0.097 0.903 29 H 0.110 0.890 30 H 0.106 0.894 31 H 0.245 0.755 32 H 0.090 0.910 33 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges 2.920 1.288 -3.161 4.492 hybrid contribution -0.905 -0.605 -0.248 1.116 sum 2.015 0.683 -3.409 4.019 Atomic orbital electron populations 1.86653 1.17545 1.80408 1.49748 1.25496 0.84331 1.13015 0.97692 0.93792 0.90065 0.70498 0.77086 1.20164 0.97503 0.90998 0.97369 1.21319 1.01645 1.01191 0.93370 1.21451 0.94335 0.93403 0.97872 1.21609 1.05515 0.95829 0.99211 1.18843 0.94774 0.83498 0.93393 1.86173 1.78755 1.16346 1.41633 1.23034 0.99638 0.92707 0.85385 1.22317 1.00064 0.91611 0.98405 0.87876 1.23058 1.00702 0.95890 0.95866 1.23387 0.86085 0.94403 0.94670 0.88658 1.86471 1.36725 1.62350 1.53327 1.23788 0.98393 0.98410 0.99405 1.21143 1.10798 0.94245 0.94769 1.96690 1.84446 1.72696 1.42411 0.76616 0.86877 1.18920 1.22966 0.82663 0.81571 0.82575 0.90616 0.90271 0.89018 0.89372 0.75512 0.91012 0.89661 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.31 12.70 -148.98 -1.89 -4.20 16 2 C -0.10 -0.16 2.02 71.24 0.14 -0.02 16 3 Si 0.78 -1.96 30.24 68.60 2.07 0.12 16 4 C -0.06 -0.11 5.26 -19.86 -0.10 -0.22 16 5 C -0.16 0.41 8.66 22.28 0.19 0.60 16 6 C -0.05 0.22 10.04 22.26 0.22 0.44 16 7 C -0.20 0.30 9.04 22.36 0.20 0.51 16 8 C 0.14 0.57 6.68 22.52 0.15 0.72 16 9 O -0.32 -1.38 9.47 -92.62 -0.88 -2.26 16 10 C 0.07 -0.11 4.58 71.98 0.33 0.22 16 11 C -0.11 0.21 4.02 -10.18 -0.04 0.17 16 12 H 0.10 -0.13 8.14 -2.39 -0.02 -0.15 16 13 C -0.12 0.32 7.46 31.12 0.23 0.55 16 14 C 0.07 -0.13 5.21 31.12 0.16 0.03 16 15 H 0.10 -0.41 8.14 -2.39 -0.02 -0.43 16 16 O -0.58 -0.39 13.67 -148.98 -2.04 -2.42 16 17 C -0.16 0.21 7.48 31.21 0.23 0.44 16 18 C -0.13 -0.76 6.23 22.40 0.14 -0.62 16 19 Br -0.05 -0.41 31.44 -20.37 -0.64 -1.05 16 20 H 0.38 -0.81 8.70 -74.06 -0.64 -1.46 16 21 H 0.11 0.34 7.22 -2.39 -0.02 0.33 16 22 H -0.26 0.39 6.68 99.48 0.66 1.06 16 23 H -0.30 -1.65 7.11 99.48 0.71 -0.94 16 24 H 0.16 -1.04 4.85 -2.91 -0.01 -1.05 16 25 H 0.17 -1.73 8.06 -2.91 -0.02 -1.75 16 26 H 0.16 -0.93 6.30 -2.91 -0.02 -0.95 16 27 H 0.08 -0.26 7.36 -2.38 -0.02 -0.28 16 28 H 0.08 -0.34 7.67 -2.39 -0.02 -0.36 16 29 H 0.09 -0.21 8.10 -2.39 -0.02 -0.22 16 30 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 31 H 0.39 -2.76 9.12 -74.06 -0.68 -3.44 16 32 H 0.07 -0.06 8.14 -2.38 -0.02 -0.08 16 33 H 0.08 -0.01 7.91 -2.39 -0.02 -0.03 16 Total: 0.00 -15.45 295.85 -1.68 -17.13 By element: Atomic # 1 Polarization: -9.97 SS G_CDS: -0.17 Total: -10.14 kcal Atomic # 6 Polarization: 0.96 SS G_CDS: 1.86 Total: 2.83 kcal Atomic # 8 Polarization: -4.08 SS G_CDS: -4.81 Total: -8.88 kcal Atomic # 14 Polarization: -1.96 SS G_CDS: 2.07 Total: 0.12 kcal Atomic # 35 Polarization: -0.41 SS G_CDS: -0.64 Total: -1.05 kcal Total: -15.45 -1.68 -17.13 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_10910592_11354860.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.660 kcal (2) G-P(sol) polarization free energy of solvation -15.448 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.107 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.680 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.127 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.787 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds