Wall clock time and date at job start Tue Mar 9 2021 14:18:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.50694 * 109.47473 * 2 1 4 4 C 1.38707 * 120.03135 * 274.45259 * 3 2 1 5 5 O 1.35903 * 120.05588 * 0.04484 * 4 3 2 6 6 C 1.42902 * 117.00032 * 270.03590 * 5 4 3 7 7 C 1.52998 * 109.47165 * 174.89703 * 6 5 4 8 8 H 1.08997 * 112.85020 * 316.19673 * 7 6 5 9 9 C 1.53777 * 113.61476 * 87.49839 * 7 6 5 10 10 C 1.53779 * 87.08247 * 139.97927 * 9 7 6 11 11 H 1.09006 * 113.61091 * 89.11403 * 10 9 7 12 12 O 1.42892 * 113.61953 * 220.01830 * 10 9 7 13 13 C 1.53774 * 113.61456 * 184.99717 * 7 6 5 14 14 C 1.38758 * 119.89225 * 180.02562 * 4 3 2 15 15 C 1.50697 * 120.02840 * 180.02562 * 14 4 3 16 16 O 1.42892 * 109.47413 * 74.98025 * 15 14 4 17 17 Si 1.86310 * 109.46825 * 194.97850 * 15 14 4 18 18 C 1.38124 * 119.93979 * 0.02562 * 14 4 3 19 19 C 1.38280 * 120.05687 * 359.97438 * 18 14 4 20 20 C 1.38170 * 120.02605 * 94.72869 * 3 2 1 21 21 H 1.08998 * 109.47445 * 184.65040 * 1 2 3 22 22 H 1.09002 * 109.47004 * 304.65557 * 1 2 3 23 23 H 1.09000 * 109.47391 * 64.65052 * 1 2 3 24 24 H 1.09003 * 109.46841 * 239.99905 * 2 1 3 25 25 H 1.08998 * 109.47319 * 120.00341 * 2 1 3 26 26 H 1.09001 * 109.46548 * 294.89141 * 6 5 4 27 27 H 1.08996 * 109.47224 * 54.89461 * 6 5 4 28 28 H 1.08999 * 113.61780 * 254.52730 * 9 7 6 29 29 H 1.09002 * 113.61550 * 25.43340 * 9 7 6 30 30 H 0.96697 * 114.00406 * 277.49699 * 12 10 9 31 31 H 1.09004 * 113.61302 * 334.56602 * 13 7 6 32 32 H 1.09001 * 113.61634 * 105.46904 * 13 7 6 33 33 H 1.08995 * 109.46841 * 314.97428 * 15 14 4 34 34 H 0.96699 * 114.00610 * 59.99230 * 16 15 14 35 35 H 1.48505 * 109.99846 * 58.68027 * 17 15 14 36 36 H 1.48503 * 109.99832 * 179.97438 * 17 15 14 37 37 H 1.08004 * 119.96938 * 179.97438 * 18 14 4 38 38 H 1.08007 * 119.94323 * 180.02562 * 19 18 14 39 39 H 1.07994 * 119.97251 * 359.97438 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0324 1.4207 0.0000 4 6 2.1759 2.1063 -1.1972 5 8 1.8629 1.4981 -2.3716 6 6 2.9097 0.7831 -3.0312 7 6 2.3431 0.0662 -4.2583 8 1 1.3917 -0.4268 -4.0586 9 6 2.3354 0.9324 -5.5288 10 6 2.7673 -0.3283 -6.2962 11 1 1.9313 -0.9288 -6.6550 12 8 3.7453 -0.0763 -7.3070 13 6 3.3653 -0.8335 -4.9726 14 6 2.6393 3.4142 -1.1939 15 6 2.7958 4.1621 -2.4928 16 8 1.5089 4.5515 -2.9764 17 14 3.8396 5.6799 -2.2135 18 6 2.9568 4.0300 0.0010 19 6 2.8129 3.3444 1.1932 20 6 2.3558 2.0397 1.1922 21 1 -0.3634 -1.0242 0.0833 22 1 -0.3633 0.5844 0.8454 23 1 -0.3634 0.4400 -0.9287 24 1 1.8932 -0.5139 -0.8900 25 1 1.8933 -0.5139 0.8899 26 1 3.6853 1.4819 -3.3446 27 1 3.3362 0.0499 -2.3467 28 1 1.3448 1.2937 -5.8050 29 1 3.0885 1.7204 -5.5247 30 1 3.3752 0.2417 -8.1419 31 1 4.4000 -0.5283 -4.8164 32 1 3.2062 -1.8979 -4.7997 33 1 3.2802 3.5181 -3.2267 34 1 1.0194 5.1271 -2.3729 35 1 5.1698 5.2904 -1.6803 36 1 4.0020 6.4260 -3.4872 37 1 3.3179 5.0479 0.0041 38 1 3.0614 3.8279 2.1265 39 1 2.2481 1.5050 2.1243 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_11759810_11354860.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:18:16 Heat of formation + Delta-G solvation = -74.525480 kcal Electronic energy + Delta-G solvation = -20924.834762 eV Core-core repulsion = 17799.918143 eV Total energy + Delta-G solvation = -3124.916620 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 265.140 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -41.50141 -40.31817 -38.22521 -37.68092 -35.97847 -35.04464 -31.92701 -30.48477 -28.89480 -26.81862 -26.58850 -24.91407 -23.46185 -22.75938 -21.56035 -20.59528 -18.90838 -18.56086 -18.09244 -17.35427 -16.63704 -16.55450 -16.33606 -15.70502 -15.49401 -15.37983 -15.05858 -14.58858 -14.58139 -14.15958 -14.05547 -13.84544 -13.47076 -13.23868 -13.16671 -12.73246 -12.60676 -12.37769 -12.15943 -12.07821 -12.01300 -11.82967 -11.66445 -11.33882 -10.89386 -10.73909 -10.25885 -9.78685 -9.52375 -5.05151 0.16205 0.22824 1.28732 1.63337 1.96811 2.32858 2.79821 3.25907 3.46747 3.47897 3.56482 3.68789 3.74584 3.81863 3.89916 3.91337 4.15693 4.21358 4.29147 4.29453 4.34086 4.44234 4.48433 4.50633 4.53858 4.63499 4.75108 4.75721 4.80821 4.94084 4.98256 5.01267 5.08344 5.13209 5.33054 5.34613 5.37049 5.41476 5.55843 5.73124 6.60583 6.65188 6.68692 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.081 4.081 3 C -0.100 4.100 4 C 0.123 3.877 5 O -0.320 6.320 6 C 0.079 3.921 7 C -0.106 4.106 8 H 0.105 0.895 9 C -0.160 4.160 10 C 0.075 3.925 11 H 0.084 0.916 12 O -0.561 6.561 13 C -0.121 4.121 14 C -0.138 4.138 15 C -0.058 4.058 16 O -0.530 6.530 17 Si 0.680 3.320 18 C -0.107 4.107 19 C -0.117 4.117 20 C -0.101 4.101 21 H 0.058 0.942 22 H 0.054 0.946 23 H 0.061 0.939 24 H 0.071 0.929 25 H 0.071 0.929 26 H 0.052 0.948 27 H 0.055 0.945 28 H 0.074 0.926 29 H 0.088 0.912 30 H 0.380 0.620 31 H 0.091 0.909 32 H 0.079 0.921 33 H 0.106 0.894 34 H 0.376 0.624 35 H -0.257 1.257 36 H -0.253 1.253 37 H 0.132 0.868 38 H 0.131 0.869 39 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.098 0.329 2.725 2.956 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.118 4.118 3 C -0.100 4.100 4 C 0.079 3.921 5 O -0.237 6.237 6 C 0.005 3.995 7 C -0.125 4.125 8 H 0.123 0.877 9 C -0.197 4.197 10 C 0.016 3.984 11 H 0.102 0.898 12 O -0.367 6.367 13 C -0.159 4.159 14 C -0.139 4.139 15 C -0.169 4.169 16 O -0.335 6.335 17 Si 0.581 3.419 18 C -0.125 4.125 19 C -0.134 4.134 20 C -0.119 4.119 21 H 0.077 0.923 22 H 0.074 0.926 23 H 0.080 0.920 24 H 0.090 0.910 25 H 0.090 0.910 26 H 0.070 0.930 27 H 0.074 0.926 28 H 0.093 0.907 29 H 0.106 0.894 30 H 0.228 0.772 31 H 0.110 0.890 32 H 0.098 0.902 33 H 0.124 0.876 34 H 0.223 0.777 35 H -0.181 1.181 36 H -0.178 1.178 37 H 0.149 0.851 38 H 0.149 0.851 39 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.066 0.180 2.371 2.379 hybrid contribution -0.232 -0.404 -0.383 0.603 sum -0.166 -0.224 1.988 2.008 Atomic orbital electron populations 1.21703 0.94099 1.01818 1.02514 1.20466 0.96820 0.91838 1.02725 1.20316 0.99914 0.97119 0.92666 1.18258 0.98033 0.90522 0.85308 1.86079 1.35671 1.68543 1.33450 1.22699 0.89313 0.94201 0.93284 1.22292 1.00281 0.97448 0.92448 0.87728 1.23720 1.02668 0.97708 0.95627 1.23315 0.91301 0.96322 0.87441 0.89785 1.86515 1.35812 1.88686 1.25638 1.23077 0.99742 0.99813 0.93251 1.20693 1.01568 0.95566 0.96065 1.24934 0.92435 1.05111 0.94400 1.86553 1.29167 1.70829 1.46969 0.94972 0.80597 0.81580 0.84737 1.20878 1.00384 0.99418 0.91817 1.21153 0.99567 0.94636 0.98094 1.21044 0.98516 0.95015 0.97302 0.92319 0.92640 0.92023 0.91002 0.91012 0.92998 0.92635 0.90714 0.89374 0.77242 0.89021 0.90225 0.87626 0.77734 1.18115 1.17758 0.85117 0.85137 0.85325 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -0.05 9.89 37.16 0.37 0.32 16 2 C -0.08 -0.03 5.79 -27.89 -0.16 -0.19 16 3 C -0.10 -0.14 5.15 -104.48 -0.54 -0.68 16 4 C 0.12 0.30 5.67 -39.22 -0.22 0.08 16 5 O -0.32 -0.92 8.70 -19.44 -0.17 -1.09 16 6 C 0.08 0.09 5.31 37.16 0.20 0.29 16 7 C -0.11 -0.03 4.01 -89.81 -0.36 -0.39 16 8 H 0.10 0.01 8.14 -51.93 -0.42 -0.41 16 9 C -0.16 -0.12 7.46 -25.92 -0.19 -0.32 16 10 C 0.08 0.03 5.21 -25.92 -0.14 -0.11 16 11 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 12 O -0.56 -0.86 13.67 -35.23 -0.48 -1.34 16 13 C -0.12 -0.02 7.47 -25.92 -0.19 -0.21 16 14 C -0.14 -0.20 5.27 -104.47 -0.55 -0.75 16 15 C -0.06 -0.07 2.38 36.00 0.09 0.01 16 16 O -0.53 -0.96 12.88 -35.23 -0.45 -1.41 16 17 Si 0.68 -0.12 29.92 -169.99 -5.09 -5.20 16 18 C -0.11 0.02 8.66 -39.61 -0.34 -0.32 16 19 C -0.12 0.06 10.04 -39.56 -0.40 -0.34 16 20 C -0.10 -0.02 9.68 -39.60 -0.38 -0.40 16 21 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 22 H 0.05 0.02 8.14 -51.93 -0.42 -0.41 16 23 H 0.06 0.10 8.14 -51.93 -0.42 -0.32 16 24 H 0.07 0.04 6.48 -51.93 -0.34 -0.30 16 25 H 0.07 -0.05 8.05 -51.93 -0.42 -0.47 16 26 H 0.05 0.07 6.73 -51.93 -0.35 -0.28 16 27 H 0.06 0.03 7.31 -51.93 -0.38 -0.35 16 28 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 29 H 0.09 0.15 7.90 -51.93 -0.41 -0.26 16 30 H 0.38 -0.92 9.12 45.56 0.42 -0.50 16 31 H 0.09 0.07 8.10 -51.93 -0.42 -0.35 16 32 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 33 H 0.11 0.25 6.52 -51.93 -0.34 -0.09 16 34 H 0.38 -0.79 8.70 45.56 0.40 -0.40 16 35 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 36 H -0.25 -0.75 7.11 56.52 0.40 -0.35 16 37 H 0.13 -0.34 5.13 -52.48 -0.27 -0.61 16 38 H 0.13 -0.35 8.06 -52.48 -0.42 -0.77 16 39 H 0.13 -0.20 8.06 -52.49 -0.42 -0.63 16 LS Contribution 318.52 15.07 4.80 4.80 Total: 0.00 -6.38 318.52 -9.33 -15.71 By element: Atomic # 1 Polarization: -3.34 SS G_CDS: -5.11 Total: -8.45 kcal Atomic # 6 Polarization: -0.18 SS G_CDS: -2.83 Total: -3.01 kcal Atomic # 8 Polarization: -2.74 SS G_CDS: -1.10 Total: -3.85 kcal Atomic # 14 Polarization: -0.12 SS G_CDS: -5.09 Total: -5.20 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -6.38 -9.33 -15.71 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_11759810_11354860.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.813 kcal (2) G-P(sol) polarization free energy of solvation -6.382 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.195 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.331 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.712 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.525 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds