Wall clock time and date at job start Tue Mar 9 2021 15:15:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42901 * 113.99776 * 2 1 4 4 C 1.53003 * 112.84718 * 65.98740 * 3 2 1 5 5 F 1.39893 * 109.47131 * 283.51408 * 4 3 2 6 6 F 1.39898 * 109.47254 * 43.51685 * 4 3 2 7 7 F 1.39904 * 109.47002 * 163.51272 * 4 3 2 8 8 C 1.53781 * 113.61606 * 294.79337 * 3 2 1 9 9 C 1.53782 * 87.07828 * 270.80047 * 8 3 2 10 10 H 1.09007 * 113.61477 * 219.93448 * 9 8 3 11 11 C 1.52994 * 113.61690 * 89.11639 * 9 8 3 12 12 O 1.42906 * 109.47139 * 176.52907 * 11 9 8 13 13 C 1.35901 * 116.99901 * 180.02562 * 12 11 9 14 14 C 1.38708 * 120.05507 * 180.02562 * 13 12 11 15 15 C 1.50701 * 120.02809 * 359.73956 * 14 13 12 16 16 C 1.38168 * 119.94720 * 180.02562 * 14 13 12 17 17 C 1.38248 * 120.04988 * 359.97438 * 16 14 13 18 18 C 1.38287 * 120.11533 * 0.02562 * 17 16 14 19 19 C 1.50701 * 119.97044 * 180.02562 * 18 17 16 20 20 O 1.42897 * 109.46911 * 119.97937 * 19 18 17 21 21 Si 1.86298 * 109.47331 * 359.97438 * 19 18 17 22 22 C 1.38119 * 120.05559 * 359.97438 * 18 17 16 23 23 C 1.53778 * 87.17338 * 334.52334 * 9 8 3 24 24 H 1.09004 * 109.46581 * 182.48983 * 1 2 3 25 25 H 1.08999 * 109.47273 * 302.48869 * 1 2 3 26 26 H 1.08995 * 109.46954 * 62.49445 * 1 2 3 27 27 H 1.09000 * 113.61560 * 156.25490 * 8 3 2 28 28 H 1.09004 * 113.69160 * 25.35418 * 8 3 2 29 29 H 1.09001 * 109.46869 * 56.52974 * 11 9 8 30 30 H 1.09003 * 109.47232 * 296.52699 * 11 9 8 31 31 H 1.09003 * 109.47113 * 90.00580 * 15 14 13 32 32 H 1.09003 * 109.47384 * 209.99980 * 15 14 13 33 33 H 1.09004 * 109.47171 * 330.00437 * 15 14 13 34 34 H 1.07998 * 119.97429 * 179.97438 * 16 14 13 35 35 H 1.08003 * 119.93711 * 180.02562 * 17 16 14 36 36 H 1.09002 * 109.46864 * 239.97190 * 19 18 17 37 37 H 0.96694 * 114.00245 * 299.99199 * 20 19 18 38 38 H 1.48498 * 109.99794 * 180.02562 * 21 19 18 39 39 H 1.48495 * 110.00029 * 301.31875 * 21 19 18 40 40 H 1.08002 * 120.03160 * 179.97438 * 22 18 17 41 41 H 1.09002 * 113.61475 * 140.02132 * 23 9 8 42 42 H 1.09000 * 113.62054 * 270.92414 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7277 2.0816 1.2880 5 9 0.4114 2.5548 1.2680 6 9 1.9029 1.2369 2.3893 7 9 2.6105 3.1626 1.3842 8 6 1.7210 2.1086 -1.2791 9 6 2.9981 1.4842 -1.8657 10 1 3.5936 2.1810 -2.4557 11 6 2.7566 0.1543 -2.5826 12 8 3.9806 -0.3046 -3.1601 13 6 3.9395 -1.4814 -3.8386 14 6 5.0912 -1.9862 -4.4242 15 6 6.3884 -1.2273 -4.3135 16 6 5.0468 -3.1826 -5.1140 17 6 3.8558 -3.8766 -5.2204 18 6 2.7063 -3.3754 -4.6375 19 6 1.4100 -4.1349 -4.7550 20 8 0.9363 -4.4733 -3.4500 21 14 1.6898 -5.6927 -5.7376 22 6 2.7455 -2.1799 -3.9469 23 6 3.4926 1.3230 -0.4186 24 1 -0.3633 -1.0268 0.0446 25 1 -0.3634 0.5520 0.8668 26 1 -0.3633 0.4746 -0.9115 27 1 1.7863 3.1879 -1.1412 28 1 0.8095 1.8017 -1.7923 29 1 2.0143 0.2947 -3.3683 30 1 2.3934 -0.5835 -1.8671 31 1 6.9219 -1.5480 -3.4187 32 1 7.0016 -1.4256 -5.1926 33 1 6.1802 -0.1592 -4.2492 34 1 5.9431 -3.5758 -5.5704 35 1 3.8233 -4.8117 -5.7596 36 1 0.6699 -3.5144 -5.2605 37 1 1.5455 -5.0259 -2.9415 38 1 0.4186 -6.4504 -5.8612 39 1 2.2127 -5.3557 -7.0860 40 1 1.8474 -1.7886 -3.4922 41 1 4.0104 0.3813 -0.2364 42 1 4.0414 2.1879 -0.0458 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_13826624_17321602.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:15:45 Heat of formation + Delta-G solvation = -205.874260 kcal Electronic energy + Delta-G solvation = -30171.994554 eV Core-core repulsion = 25477.482678 eV Total energy + Delta-G solvation = -4694.511876 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.127 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -51.17863 -48.72693 -48.60685 -41.83175 -41.03169 -38.95371 -37.56577 -37.01058 -33.94446 -31.39524 -30.35774 -29.11846 -28.32635 -27.44256 -26.90721 -25.22617 -23.92512 -22.95673 -22.05647 -20.59340 -19.81894 -19.47405 -19.23131 -18.88389 -18.03451 -17.38982 -16.94492 -16.80656 -16.64155 -16.52314 -16.06875 -15.86013 -15.62784 -15.56998 -15.50754 -15.32148 -15.09447 -14.84442 -14.79496 -14.63927 -14.56052 -14.23288 -14.06778 -13.93290 -13.65705 -13.37299 -13.30101 -12.92116 -12.83411 -12.65592 -12.48542 -12.40897 -12.10076 -11.89417 -11.85185 -11.77605 -11.57748 -10.87960 -10.46632 -9.74164 -9.08552 -5.03821 0.24720 0.43363 1.28093 1.54434 1.62721 1.94910 1.96905 2.04310 2.53213 2.61391 2.67862 2.83676 3.22409 3.34156 3.40929 3.45356 3.59963 3.64788 3.89021 3.96895 4.07012 4.11499 4.13880 4.19005 4.24155 4.25074 4.33776 4.39351 4.45683 4.49808 4.56037 4.60094 4.66697 4.70237 4.72921 4.80434 4.87333 4.90311 5.24001 5.31121 5.43897 5.51127 5.60479 5.79244 6.41167 6.54265 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.331 6.331 3 C 0.039 3.961 4 C 0.437 3.563 5 F -0.182 7.182 6 F -0.174 7.174 7 F -0.175 7.175 8 C -0.143 4.143 9 C -0.098 4.098 10 H 0.105 0.895 11 C 0.069 3.931 12 O -0.308 6.308 13 C 0.132 3.868 14 C -0.111 4.111 15 C -0.107 4.107 16 C -0.078 4.078 17 C -0.152 4.152 18 C -0.087 4.087 19 C -0.069 4.069 20 O -0.540 6.540 21 Si 0.691 3.309 22 C -0.178 4.178 23 C -0.111 4.111 24 H 0.103 0.897 25 H 0.055 0.945 26 H 0.054 0.946 27 H 0.112 0.888 28 H 0.094 0.906 29 H 0.064 0.936 30 H 0.086 0.914 31 H 0.070 0.930 32 H 0.066 0.934 33 H 0.070 0.930 34 H 0.134 0.866 35 H 0.127 0.873 36 H 0.112 0.888 37 H 0.380 0.620 38 H -0.255 1.255 39 H -0.258 1.258 40 H 0.131 0.869 41 H 0.099 0.901 42 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.627 -0.789 -1.467 2.329 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 O -0.249 6.249 3 C -0.004 4.004 4 C 0.382 3.618 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.156 7.156 8 C -0.181 4.181 9 C -0.116 4.116 10 H 0.124 0.876 11 C -0.006 4.006 12 O -0.221 6.221 13 C 0.086 3.914 14 C -0.112 4.112 15 C -0.164 4.164 16 C -0.096 4.096 17 C -0.169 4.169 18 C -0.087 4.087 19 C -0.180 4.180 20 O -0.345 6.345 21 Si 0.594 3.406 22 C -0.196 4.196 23 C -0.148 4.148 24 H 0.121 0.879 25 H 0.073 0.927 26 H 0.072 0.928 27 H 0.131 0.869 28 H 0.112 0.888 29 H 0.083 0.917 30 H 0.104 0.896 31 H 0.089 0.911 32 H 0.085 0.915 33 H 0.089 0.911 34 H 0.151 0.849 35 H 0.145 0.855 36 H 0.130 0.870 37 H 0.227 0.773 38 H -0.181 1.181 39 H -0.183 1.183 40 H 0.148 0.852 41 H 0.118 0.882 42 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 1.151 -0.911 -2.310 2.736 hybrid contribution -0.833 0.946 0.393 1.320 sum 0.318 0.035 -1.916 1.943 Atomic orbital electron populations 1.23161 0.79439 1.04540 1.01496 1.88094 1.21159 1.21813 1.93816 1.24097 1.00088 0.86348 0.89837 1.21182 0.74276 0.78713 0.87595 1.93184 1.36983 1.89312 1.96832 1.93222 1.94949 1.70612 1.56709 1.93181 1.68810 1.57054 1.96574 1.23589 0.99611 1.01129 0.93755 1.22063 0.97430 0.96488 0.95630 0.87632 1.22739 0.85299 0.95527 0.97017 1.86011 1.34638 1.35152 1.66348 1.18787 0.93629 0.85759 0.93208 1.19342 0.94350 0.96646 1.00845 1.20640 0.93269 1.00168 1.02289 1.20861 0.97982 0.93344 0.97433 1.20893 0.92658 1.00625 1.02757 1.20087 0.95360 0.95390 0.97894 1.25076 0.94915 1.06536 0.91494 1.86486 1.47560 1.73583 1.26907 0.94568 0.84326 0.80844 0.80906 1.21046 0.97393 0.96835 1.04363 1.23302 0.90808 1.05774 0.94886 0.87861 0.92685 0.92752 0.86931 0.88761 0.91745 0.89646 0.91124 0.91524 0.91064 0.84860 0.85516 0.87038 0.77303 1.18054 1.18259 0.85162 0.88218 0.86538 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.43 101.05 1.05 1.04 16 2 O -0.33 -0.11 8.34 -35.23 -0.29 -0.41 16 3 C 0.04 -0.02 0.85 -89.67 -0.08 -0.09 16 4 C 0.44 0.48 2.51 37.16 0.09 0.58 16 5 F -0.18 -0.26 15.24 2.25 0.03 -0.22 16 6 F -0.17 -0.50 17.09 2.25 0.04 -0.46 16 7 F -0.17 -0.20 15.82 2.25 0.04 -0.16 16 8 C -0.14 0.33 6.52 -25.92 -0.17 0.16 16 9 C -0.10 0.18 4.19 -89.81 -0.38 -0.20 16 10 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 11 C 0.07 -0.04 4.34 37.15 0.16 0.12 16 12 O -0.31 -0.42 9.18 -19.43 -0.18 -0.60 16 13 C 0.13 0.24 6.66 -39.22 -0.26 -0.02 16 14 C -0.11 -0.13 5.89 -104.47 -0.62 -0.75 16 15 C -0.11 0.02 9.79 36.01 0.35 0.37 16 16 C -0.08 -0.01 9.70 -39.60 -0.38 -0.39 16 17 C -0.15 0.00 8.67 -39.56 -0.34 -0.35 16 18 C -0.09 -0.06 5.39 -104.65 -0.56 -0.62 16 19 C -0.07 0.00 2.82 36.01 0.10 0.10 16 20 O -0.54 -0.17 12.77 -35.23 -0.45 -0.62 16 21 Si 0.69 -0.61 29.79 -169.99 -5.06 -5.67 16 22 C -0.18 -0.25 8.60 -39.43 -0.34 -0.59 16 23 C -0.11 0.14 6.92 -25.78 -0.18 -0.04 16 24 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 25 H 0.05 -0.04 6.25 -51.93 -0.32 -0.36 16 26 H 0.05 -0.14 6.76 -51.93 -0.35 -0.49 16 27 H 0.11 -0.35 8.06 -51.93 -0.42 -0.77 16 28 H 0.09 -0.28 6.70 -51.93 -0.35 -0.63 16 29 H 0.06 -0.07 7.66 -51.93 -0.40 -0.47 16 30 H 0.09 0.00 5.61 -51.93 -0.29 -0.29 16 31 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.07 -0.09 8.08 -51.93 -0.42 -0.51 16 33 H 0.07 0.02 7.54 -51.93 -0.39 -0.37 16 34 H 0.13 -0.26 8.06 -52.49 -0.42 -0.69 16 35 H 0.13 -0.23 4.88 -52.48 -0.26 -0.48 16 36 H 0.11 0.04 7.96 -51.93 -0.41 -0.37 16 37 H 0.38 -1.24 8.70 45.56 0.40 -0.84 16 38 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 39 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 40 H 0.13 0.12 6.30 -52.49 -0.33 -0.22 16 41 H 0.10 -0.06 8.10 -51.93 -0.42 -0.48 16 42 H 0.12 -0.26 7.01 -51.93 -0.36 -0.62 16 LS Contribution 347.82 15.07 5.24 5.24 Total: 0.00 -5.68 347.82 -7.40 -13.08 By element: Atomic # 1 Polarization: -4.28 SS G_CDS: -5.22 Total: -9.50 kcal Atomic # 6 Polarization: 0.87 SS G_CDS: -1.54 Total: -0.67 kcal Atomic # 8 Polarization: -0.70 SS G_CDS: -0.92 Total: -1.63 kcal Atomic # 9 Polarization: -0.96 SS G_CDS: 0.11 Total: -0.85 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: -5.06 Total: -5.67 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -5.68 -7.40 -13.08 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_13826624_17321602.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -192.792 kcal (2) G-P(sol) polarization free energy of solvation -5.683 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -198.476 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.399 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.082 kcal (6) G-S(sol) free energy of system = (1) + (5) -205.874 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds