Wall clock time and date at job start Tue Mar 9 2021 14:44:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.42903 * 109.47515 * 2 1 4 4 C 1.35993 * 116.99994 * 179.97438 * 3 2 1 5 5 C 1.39151 * 120.06912 * 180.02562 * 4 3 2 6 6 O 1.35993 * 120.07506 * 0.02562 * 5 4 3 7 7 C 1.42899 * 116.99903 * 179.72435 * 6 5 4 8 8 C 1.53004 * 109.46971 * 179.97438 * 7 6 5 9 9 H 1.08998 * 112.84447 * 43.81346 * 8 7 6 10 10 C 1.53785 * 113.61259 * 175.00021 * 8 7 6 11 11 C 1.53781 * 87.08072 * 89.12037 * 10 8 7 12 12 O 1.42898 * 113.61210 * 270.88217 * 11 10 8 13 13 C 1.42899 * 114.00176 * 294.90478 * 12 11 10 14 14 C 1.52995 * 113.61364 * 139.97782 * 11 10 8 15 15 F 1.39901 * 109.47034 * 54.63196 * 14 11 10 16 16 F 1.39904 * 109.47035 * 174.62513 * 14 11 10 17 17 F 1.39898 * 109.47197 * 294.62776 * 14 11 10 18 18 C 1.53772 * 113.61719 * 272.49852 * 8 7 6 19 19 C 1.38572 * 119.85069 * 179.72809 * 5 4 3 20 20 C 1.38240 * 120.00060 * 0.27811 * 19 5 4 21 21 C 1.38251 * 120.14527 * 359.97438 * 20 19 5 22 22 C 1.50702 * 119.92527 * 180.02562 * 21 20 19 23 23 O 1.42902 * 109.46796 * 120.00215 * 22 21 20 24 24 Si 1.86298 * 109.47247 * 0.02562 * 22 21 20 25 25 C 1.38241 * 120.14962 * 0.02562 * 21 20 19 26 26 H 1.08999 * 109.47333 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.46781 * 299.99632 * 1 2 3 28 28 H 1.08998 * 109.46645 * 59.99529 * 1 2 3 29 29 H 1.09006 * 109.47110 * 240.00010 * 2 1 3 30 30 H 1.08996 * 109.47490 * 120.00800 * 2 1 3 31 31 H 1.09008 * 109.47141 * 60.00488 * 7 6 5 32 32 H 1.08999 * 109.47669 * 300.00584 * 7 6 5 33 33 H 1.08998 * 113.61556 * 334.56841 * 10 8 7 34 34 H 1.09000 * 113.69122 * 203.67979 * 10 8 7 35 35 H 1.09001 * 109.46934 * 302.58094 * 13 12 11 36 36 H 1.09002 * 109.46811 * 62.58405 * 13 12 11 37 37 H 1.09005 * 109.46893 * 182.58140 * 13 12 11 38 38 H 1.09006 * 113.61577 * 156.33823 * 18 8 7 39 39 H 1.09003 * 113.61352 * 25.43613 * 18 8 7 40 40 H 1.07998 * 119.99670 * 180.25437 * 19 5 4 41 41 H 1.07997 * 119.92564 * 179.97438 * 20 19 5 42 42 H 1.08997 * 109.47048 * 239.99951 * 22 21 20 43 43 H 0.96699 * 114.00026 * 299.99946 * 23 22 21 44 44 H 1.48495 * 110.00235 * 180.02562 * 24 22 21 45 45 H 1.48507 * 109.99899 * 301.31725 * 24 22 21 46 46 H 1.07999 * 120.00539 * 179.97438 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 3.3547 1.5254 0.0005 5 6 3.8882 2.8105 0.0011 6 8 3.0625 3.8912 0.0017 7 6 3.6804 5.1796 0.0084 8 6 2.6002 6.2632 0.0073 9 1 1.7853 6.0490 0.6986 10 6 3.1590 7.6901 0.1370 11 6 3.2536 7.7082 -1.3978 12 8 4.4966 7.2140 -1.9005 13 6 5.6257 8.0167 -1.5500 14 6 2.8485 9.0454 -2.0211 15 9 3.6037 10.0745 -1.4487 16 9 3.0822 9.0070 -3.4000 17 9 1.4892 9.2773 -1.7847 18 6 2.1277 6.6607 -1.4010 19 6 5.2626 2.9868 0.0074 20 6 6.1005 1.8872 0.0072 21 6 5.5704 0.6104 0.0014 22 6 6.4884 -0.5848 0.0018 23 8 6.2393 -1.3762 1.1653 24 14 8.2596 -0.0074 0.0116 25 6 4.2001 0.4275 -0.0049 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3632 0.5139 -0.8900 29 1 1.8934 -0.5139 -0.8900 30 1 1.8934 -0.5139 0.8899 31 1 4.3042 5.2881 -0.8790 32 1 4.2976 5.2821 0.9009 33 1 4.1276 7.7362 0.6348 34 1 2.4422 8.4063 0.5387 35 1 5.4736 9.0344 -1.9096 36 1 5.7413 8.0277 -0.4662 37 1 6.5235 7.6002 -2.0069 38 1 1.1279 7.0945 -1.4199 39 1 2.2637 5.8757 -2.1449 40 1 5.6792 3.9832 0.0120 41 1 7.1715 2.0260 0.0117 42 1 6.3059 -1.1834 -0.8906 43 1 6.3820 -0.9065 1.9984 44 1 9.1750 -1.1766 0.0115 45 1 8.5231 0.8434 -1.1767 46 1 3.7885 -0.5710 -0.0099 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_34834_17321602.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:44:35 Heat of formation + Delta-G solvation = -237.286818 kcal Electronic energy + Delta-G solvation = -34223.098169 eV Core-core repulsion = 29053.004331 eV Total energy + Delta-G solvation = -5170.093838 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.142 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -51.17679 -48.72431 -48.60613 -41.89061 -41.31330 -39.42288 -38.89315 -37.30498 -36.79878 -32.97339 -31.77384 -30.99202 -30.27221 -28.35974 -27.57332 -26.91790 -26.18477 -24.97385 -23.52528 -22.73529 -22.24598 -20.67264 -19.89314 -19.50396 -19.40951 -19.22846 -18.42040 -18.02496 -17.40241 -17.24031 -17.08188 -16.60287 -16.53903 -16.15317 -16.03887 -15.77814 -15.66121 -15.59306 -15.50636 -15.38035 -15.09552 -14.85631 -14.79415 -14.68415 -14.42592 -14.26406 -14.10380 -13.83443 -13.67933 -13.56991 -13.44661 -13.32175 -12.94321 -12.82089 -12.60555 -12.41204 -12.33532 -12.05609 -11.95981 -11.82617 -11.76704 -11.68585 -11.61407 -10.88393 -10.45499 -9.72676 -8.78255 -5.05278 0.24103 0.34696 1.28343 1.54568 1.61965 1.95426 1.96128 2.03794 2.22764 2.53028 2.61630 2.63190 2.85502 3.24442 3.34095 3.43088 3.45181 3.58736 3.68441 3.84865 3.89684 3.99422 4.04409 4.06853 4.10828 4.18547 4.23111 4.25891 4.29349 4.32101 4.34890 4.39148 4.48144 4.50259 4.56704 4.59869 4.66569 4.73556 4.75561 4.87493 4.91955 5.03675 5.16209 5.18282 5.41794 5.59135 5.62814 6.11585 6.55552 6.61734 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.053 3.947 3 O -0.304 6.304 4 C 0.104 3.896 5 C 0.110 3.890 6 O -0.299 6.299 7 C 0.068 3.932 8 C -0.097 4.097 9 H 0.107 0.893 10 C -0.142 4.142 11 C 0.039 3.961 12 O -0.332 6.332 13 C 0.008 3.992 14 C 0.437 3.563 15 F -0.182 7.182 16 F -0.174 7.174 17 F -0.174 7.174 18 C -0.112 4.112 19 C -0.167 4.167 20 C -0.114 4.114 21 C -0.118 4.118 22 C -0.065 4.065 23 O -0.541 6.541 24 Si 0.690 3.310 25 C -0.147 4.147 26 H 0.079 0.921 27 H 0.067 0.933 28 H 0.067 0.933 29 H 0.061 0.939 30 H 0.063 0.937 31 H 0.083 0.917 32 H 0.066 0.934 33 H 0.094 0.906 34 H 0.112 0.888 35 H 0.055 0.945 36 H 0.055 0.945 37 H 0.102 0.898 38 H 0.116 0.884 39 H 0.099 0.901 40 H 0.138 0.862 41 H 0.130 0.870 42 H 0.113 0.887 43 H 0.379 0.621 44 H -0.255 1.255 45 H -0.257 1.257 46 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.400 0.608 3.802 4.097 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.022 4.022 3 O -0.218 6.218 4 C 0.058 3.942 5 C 0.064 3.936 6 O -0.213 6.213 7 C -0.007 4.007 8 C -0.115 4.115 9 H 0.125 0.875 10 C -0.180 4.180 11 C -0.004 4.004 12 O -0.250 6.250 13 C -0.087 4.087 14 C 0.382 3.618 15 F -0.163 7.163 16 F -0.155 7.155 17 F -0.156 7.156 18 C -0.149 4.149 19 C -0.186 4.186 20 C -0.132 4.132 21 C -0.118 4.118 22 C -0.176 4.176 23 O -0.346 6.346 24 Si 0.592 3.408 25 C -0.166 4.166 26 H 0.098 0.902 27 H 0.086 0.914 28 H 0.086 0.914 29 H 0.079 0.921 30 H 0.081 0.919 31 H 0.101 0.899 32 H 0.085 0.915 33 H 0.113 0.887 34 H 0.131 0.869 35 H 0.073 0.927 36 H 0.074 0.926 37 H 0.120 0.880 38 H 0.135 0.865 39 H 0.117 0.883 40 H 0.156 0.844 41 H 0.148 0.852 42 H 0.130 0.870 43 H 0.226 0.774 44 H -0.180 1.180 45 H -0.182 1.182 46 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 1.677 0.176 2.792 3.262 hybrid contribution -0.191 0.377 -0.451 0.618 sum 1.486 0.554 2.341 2.828 Atomic orbital electron populations 1.21767 0.92435 1.02986 1.03691 1.22833 0.96186 0.81799 1.01410 1.86189 1.17725 1.29136 1.88703 1.18237 0.83422 0.90986 1.01504 1.18213 0.88954 0.85215 1.01227 1.86137 1.33917 1.12552 1.88713 1.22751 0.95103 0.80200 1.02641 1.22049 0.98929 0.92394 0.98157 0.87505 1.23596 1.04242 0.97667 0.92477 1.24056 0.90030 0.90594 0.95709 1.88091 1.12810 1.48767 1.75322 1.23161 0.88389 0.96180 1.00987 1.21180 0.75242 0.88009 0.77330 1.93185 1.75836 1.62741 1.84558 1.93223 1.94107 1.96707 1.31500 1.93181 1.32924 1.95261 1.94211 1.23266 0.96121 0.96957 0.98537 1.21010 0.91050 1.00229 1.06318 1.20686 0.99178 0.91460 1.01871 1.20008 0.94104 0.94719 1.03001 1.25018 1.08136 0.93199 0.91261 1.86493 1.92347 1.40333 1.15456 0.94697 0.75221 0.82158 0.88756 1.20907 0.93022 0.97760 1.04944 0.90245 0.91396 0.91430 0.92103 0.91893 0.89885 0.91537 0.88717 0.86928 0.92681 0.92635 0.87985 0.86532 0.88261 0.84386 0.85231 0.86985 0.77353 1.18015 1.18238 0.84401 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.11 10.28 37.16 0.38 0.49 16 2 C 0.05 0.02 5.46 37.16 0.20 0.22 16 3 O -0.30 -1.02 9.92 -34.23 -0.34 -1.35 16 4 C 0.10 0.30 6.70 -39.12 -0.26 0.04 16 5 C 0.11 0.26 6.70 -39.12 -0.26 0.00 16 6 O -0.30 -0.71 9.92 -34.23 -0.34 -1.05 16 7 C 0.07 -0.05 4.33 37.16 0.16 0.11 16 8 C -0.10 0.16 4.20 -89.81 -0.38 -0.21 16 9 H 0.11 -0.20 8.14 -51.93 -0.42 -0.62 16 10 C -0.14 0.37 6.52 -25.92 -0.17 0.20 16 11 C 0.04 -0.02 0.85 -89.81 -0.08 -0.10 16 12 O -0.33 0.03 8.35 -35.23 -0.29 -0.26 16 13 C 0.01 -0.02 10.44 101.05 1.05 1.04 16 14 C 0.44 0.44 2.52 37.15 0.09 0.53 16 15 F -0.18 -0.21 15.26 2.25 0.03 -0.18 16 16 F -0.17 -0.50 17.09 2.25 0.04 -0.46 16 17 F -0.17 -0.21 15.82 2.25 0.04 -0.17 16 18 C -0.11 0.11 6.89 -25.92 -0.18 -0.07 16 19 C -0.17 -0.06 9.04 -39.46 -0.36 -0.42 16 20 C -0.11 0.01 8.66 -39.58 -0.34 -0.33 16 21 C -0.12 -0.07 5.39 -104.62 -0.56 -0.64 16 22 C -0.07 0.01 2.82 36.01 0.10 0.11 16 23 O -0.54 -0.09 12.76 -35.23 -0.45 -0.54 16 24 Si 0.69 -0.75 29.78 -169.99 -5.06 -5.82 16 25 C -0.15 -0.23 8.60 -39.46 -0.34 -0.57 16 26 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 27 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 28 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.06 -0.02 7.65 -51.93 -0.40 -0.42 16 30 H 0.06 -0.03 7.67 -51.93 -0.40 -0.43 16 31 H 0.08 -0.05 5.64 -51.92 -0.29 -0.34 16 32 H 0.07 -0.14 7.66 -51.93 -0.40 -0.54 16 33 H 0.09 -0.35 6.69 -51.93 -0.35 -0.70 16 34 H 0.11 -0.37 8.07 -51.93 -0.42 -0.79 16 35 H 0.05 -0.07 6.26 -51.93 -0.33 -0.39 16 36 H 0.06 -0.20 6.75 -51.93 -0.35 -0.55 16 37 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 38 H 0.12 -0.21 7.00 -51.93 -0.36 -0.57 16 39 H 0.10 -0.01 8.10 -51.93 -0.42 -0.43 16 40 H 0.14 -0.25 6.30 -52.49 -0.33 -0.58 16 41 H 0.13 -0.28 4.87 -52.49 -0.26 -0.54 16 42 H 0.11 0.04 7.96 -51.93 -0.41 -0.38 16 43 H 0.38 -1.37 8.70 45.56 0.40 -0.97 16 44 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 45 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 46 H 0.14 0.10 6.30 -52.49 -0.33 -0.23 16 LS Contribution 378.84 15.07 5.71 5.71 Total: 0.00 -6.92 378.84 -7.56 -14.48 By element: Atomic # 1 Polarization: -4.81 SS G_CDS: -5.96 Total: -10.76 kcal Atomic # 6 Polarization: 1.34 SS G_CDS: -0.93 Total: 0.40 kcal Atomic # 8 Polarization: -1.79 SS G_CDS: -1.42 Total: -3.21 kcal Atomic # 9 Polarization: -0.91 SS G_CDS: 0.11 Total: -0.80 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.06 Total: -5.82 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -6.92 -7.56 -14.48 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_34834_17321602.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -222.807 kcal (2) G-P(sol) polarization free energy of solvation -6.923 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -229.729 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.557 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.480 kcal (6) G-S(sol) free energy of system = (1) + (5) -237.287 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds