Wall clock time and date at job start Tue Mar 9 2021 14:59:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35992 * 117.00309 * 2 1 4 4 C 1.39159 * 120.07622 * 179.97438 * 3 2 1 5 5 O 1.35992 * 120.07189 * 0.02601 * 4 3 2 6 6 C 1.42899 * 117.00222 * 179.97438 * 5 4 3 7 7 C 1.52997 * 109.47457 * 179.97438 * 6 5 4 8 8 H 1.09001 * 109.46832 * 304.99973 * 7 6 5 9 9 C 1.53006 * 109.47127 * 64.99652 * 7 6 5 10 10 C 1.52997 * 109.47127 * 179.97438 * 9 7 6 11 11 C 1.53000 * 109.47060 * 300.00449 * 10 9 7 12 12 H 1.09001 * 109.47194 * 299.99650 * 11 10 9 13 13 O 1.42903 * 109.46726 * 180.02562 * 11 10 9 14 14 C 1.52996 * 109.47328 * 60.00126 * 11 10 9 15 15 C 1.52997 * 109.47232 * 184.99774 * 7 6 5 16 16 C 1.38564 * 119.85459 * 180.29760 * 4 3 2 17 17 C 1.38244 * 119.99947 * 359.46814 * 16 4 3 18 18 C 1.50696 * 119.92995 * 180.25709 * 17 16 4 19 19 O 1.42911 * 109.46648 * 300.25710 * 18 17 16 20 20 Si 1.86297 * 109.47439 * 180.25958 * 18 17 16 21 21 C 1.38257 * 120.14693 * 0.51218 * 17 16 4 22 22 C 1.38248 * 120.14364 * 359.76420 * 21 17 16 23 23 H 1.09006 * 109.46865 * 299.99923 * 1 2 3 24 24 H 1.08993 * 109.47089 * 59.99685 * 1 2 3 25 25 H 1.08993 * 109.47340 * 180.02562 * 1 2 3 26 26 H 1.09004 * 109.47043 * 59.99452 * 6 5 4 27 27 H 1.09002 * 109.46902 * 300.00043 * 6 5 4 28 28 H 1.08998 * 109.46505 * 59.99871 * 9 7 6 29 29 H 1.08996 * 109.46884 * 300.00752 * 9 7 6 30 30 H 1.09002 * 109.47153 * 180.02562 * 10 9 7 31 31 H 1.09001 * 109.46832 * 60.00321 * 10 9 7 32 32 H 0.96700 * 113.99509 * 179.97438 * 13 11 10 33 33 H 1.08992 * 109.47554 * 59.99639 * 14 11 10 34 34 H 1.09004 * 109.47108 * 179.97438 * 14 11 10 35 35 H 1.09002 * 109.47045 * 59.99942 * 15 7 6 36 36 H 1.09001 * 109.47375 * 299.99867 * 15 7 6 37 37 H 1.07995 * 120.00015 * 179.70804 * 16 4 3 38 38 H 1.09000 * 109.46936 * 60.25162 * 18 17 16 39 39 H 0.96703 * 113.99070 * 180.02562 * 19 18 17 40 40 H 1.48505 * 109.99474 * 298.67742 * 20 18 17 41 41 H 1.48497 * 110.00444 * 59.99590 * 20 18 17 42 42 H 1.07990 * 119.93095 * 179.73990 * 21 17 16 43 43 H 1.07999 * 119.99535 * 179.97438 * 22 21 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2863 0.0005 5 8 4.1796 0.1476 0.0005 6 6 5.6003 0.3005 0.0005 7 6 6.2618 -1.0790 0.0012 8 1 5.8874 -1.6611 0.8432 9 6 5.9326 -1.8031 -1.3059 10 6 6.5947 -3.1825 -1.3055 11 6 8.1109 -3.0204 -1.1801 12 1 8.4849 -2.4381 -2.0222 13 8 8.7292 -4.3087 -1.1804 14 6 8.4400 -2.2964 0.1269 15 6 7.7781 -0.9176 0.1268 16 6 4.0604 2.5233 0.0068 17 6 3.3031 3.6798 0.0013 18 6 3.9837 5.0243 0.0023 19 8 4.7992 5.1444 1.1698 20 14 2.6973 6.3718 0.0020 21 6 1.9225 3.6058 0.0004 22 6 1.2933 2.3748 -0.0001 23 1 -0.3633 0.5139 0.8901 24 1 -0.3633 0.5138 -0.8899 25 1 -0.3633 -1.0276 0.0005 26 1 5.9066 0.8504 0.8905 27 1 5.9066 0.8503 -0.8895 28 1 6.3070 -1.2210 -2.1479 29 1 4.8524 -1.9180 -1.3954 30 1 6.3605 -3.6981 -2.2369 31 1 6.2206 -3.7647 -0.4634 32 1 9.6928 -4.2824 -1.1039 33 1 8.0660 -2.8786 0.9690 34 1 9.5203 -2.1814 0.2165 35 1 8.0126 -0.4017 1.0580 36 1 8.1526 -0.3355 -0.7152 37 1 5.1386 2.5839 0.0120 38 1 4.6069 5.1166 -0.8872 39 1 5.2683 5.9874 1.2366 40 1 1.8630 6.2771 -1.2229 41 1 1.8411 6.2569 1.2098 42 1 1.3343 4.5114 0.0004 43 1 0.2147 2.3197 -0.0004 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_34849_16737256.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:59:43 Heat of formation + Delta-G solvation = -138.696979 kcal Electronic energy + Delta-G solvation = -24304.314849 eV Core-core repulsion = 20702.395734 eV Total energy + Delta-G solvation = -3601.919116 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.155 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.67049 -40.32133 -39.26743 -38.74929 -37.11996 -36.58632 -32.37806 -31.87043 -31.76583 -30.85225 -28.62974 -26.83077 -25.97815 -23.93141 -23.39998 -22.44434 -21.92427 -20.86689 -19.44715 -18.50307 -18.19906 -18.13165 -17.70763 -17.14766 -16.61667 -16.28619 -16.08199 -15.84243 -15.58764 -15.47443 -15.30037 -14.82371 -14.59296 -14.11504 -14.00700 -13.80728 -13.69510 -13.49256 -13.26838 -13.12098 -12.88788 -12.50493 -12.26059 -12.18287 -12.10626 -12.07865 -11.97565 -11.84462 -11.62874 -11.50581 -11.10905 -10.72232 -10.37315 -9.72705 -8.79616 -4.99752 0.22880 0.31315 1.25412 1.61536 1.95215 2.15262 2.29052 2.58256 3.18995 3.34855 3.57320 3.64460 3.69810 3.76313 3.82249 3.93596 3.97459 4.11828 4.16135 4.20388 4.22822 4.26157 4.33122 4.35279 4.38740 4.41274 4.47310 4.50377 4.54349 4.58268 4.63740 4.78298 4.91074 5.01011 5.03338 5.07248 5.13219 5.13800 5.22880 5.31955 5.40807 5.42370 5.59374 6.09070 6.57554 6.60357 6.71895 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.303 6.303 3 C 0.105 3.895 4 C 0.107 3.893 5 O -0.299 6.299 6 C 0.061 3.939 7 C -0.086 4.086 8 H 0.085 0.915 9 C -0.110 4.110 10 C -0.113 4.113 11 C 0.103 3.897 12 H 0.055 0.945 13 O -0.569 6.569 14 C -0.150 4.150 15 C -0.110 4.110 16 C -0.143 4.143 17 C -0.073 4.073 18 C -0.069 4.069 19 O -0.546 6.546 20 Si 0.684 3.316 21 C -0.122 4.122 22 C -0.166 4.166 23 H 0.055 0.945 24 H 0.056 0.944 25 H 0.103 0.897 26 H 0.064 0.936 27 H 0.063 0.937 28 H 0.064 0.936 29 H 0.079 0.921 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.378 0.622 33 H 0.073 0.927 34 H 0.068 0.932 35 H 0.070 0.930 36 H 0.068 0.932 37 H 0.140 0.860 38 H 0.074 0.926 39 H 0.382 0.618 40 H -0.255 1.255 41 H -0.250 1.250 42 H 0.122 0.878 43 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.874 4.591 -0.928 5.044 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.217 6.217 3 C 0.059 3.941 4 C 0.061 3.939 5 O -0.212 6.212 6 C -0.014 4.014 7 C -0.105 4.105 8 H 0.104 0.896 9 C -0.148 4.148 10 C -0.151 4.151 11 C 0.044 3.956 12 H 0.073 0.927 13 O -0.374 6.374 14 C -0.188 4.188 15 C -0.148 4.148 16 C -0.162 4.162 17 C -0.073 4.073 18 C -0.179 4.179 19 O -0.352 6.352 20 Si 0.585 3.415 21 C -0.139 4.139 22 C -0.185 4.185 23 H 0.074 0.926 24 H 0.074 0.926 25 H 0.121 0.879 26 H 0.083 0.917 27 H 0.081 0.919 28 H 0.082 0.918 29 H 0.098 0.902 30 H 0.089 0.911 31 H 0.090 0.910 32 H 0.225 0.775 33 H 0.092 0.908 34 H 0.087 0.913 35 H 0.089 0.911 36 H 0.086 0.914 37 H 0.158 0.842 38 H 0.092 0.908 39 H 0.230 0.770 40 H -0.180 1.180 41 H -0.175 1.175 42 H 0.139 0.861 43 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 0.176 3.578 -0.883 3.689 hybrid contribution 0.596 0.053 -0.025 0.599 sum 0.772 3.630 -0.908 3.821 Atomic orbital electron populations 1.23120 0.78254 1.04369 1.01310 1.86196 1.21235 1.25514 1.88723 1.18267 0.89182 0.85303 1.01334 1.18208 0.88196 0.86144 1.01377 1.86166 1.18534 1.27862 1.88668 1.22927 0.78320 0.98582 1.01553 1.21209 0.94811 0.94491 0.99985 0.89650 1.21533 1.01618 0.95061 0.96575 1.21484 0.92758 0.97527 1.03291 1.21858 0.94026 0.83790 0.95917 0.92744 1.86535 1.24768 1.29256 1.96881 1.22231 1.00788 0.96459 0.99282 1.21443 0.93418 0.97202 1.02706 1.20880 1.00642 0.89997 1.04712 1.19020 0.92619 0.93545 1.02121 1.24648 1.01702 1.00824 0.90735 1.86496 1.64351 1.42182 1.42187 0.95407 0.79506 0.85831 0.80734 1.20542 0.93602 0.96984 1.02820 1.20964 1.00198 0.91009 1.06332 0.92591 0.92583 0.87859 0.91736 0.91901 0.91769 0.90245 0.91051 0.91040 0.77493 0.90827 0.91339 0.91083 0.91371 0.84222 0.90791 0.77031 1.17974 1.17486 0.86080 0.84296 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 0.99 16 2 O -0.30 -1.24 10.28 -34.21 -0.35 -1.59 16 3 C 0.10 0.44 6.70 -39.12 -0.26 0.18 16 4 C 0.11 0.45 6.70 -39.12 -0.26 0.19 16 5 O -0.30 -1.17 9.46 -34.21 -0.32 -1.49 16 6 C 0.06 0.05 4.12 37.16 0.15 0.20 16 7 C -0.09 -0.01 2.43 -90.62 -0.22 -0.23 16 8 H 0.09 0.09 8.14 -51.93 -0.42 -0.33 16 9 C -0.11 -0.06 5.10 -26.73 -0.14 -0.20 16 10 C -0.11 -0.12 5.57 -26.73 -0.15 -0.27 16 11 C 0.10 0.04 3.47 -26.73 -0.09 -0.05 16 12 H 0.05 -0.01 8.14 -51.93 -0.42 -0.44 16 13 O -0.57 -0.89 13.32 -35.23 -0.47 -1.36 16 14 C -0.15 0.12 5.54 -26.76 -0.15 -0.03 16 15 C -0.11 0.14 5.20 -26.76 -0.14 0.00 16 16 C -0.14 -0.44 8.59 -39.46 -0.34 -0.78 16 17 C -0.07 -0.21 5.43 -104.61 -0.57 -0.78 16 18 C -0.07 -0.01 2.81 36.00 0.10 0.09 16 19 O -0.55 -0.11 12.74 -35.23 -0.45 -0.56 16 20 Si 0.68 -0.63 29.78 -169.99 -5.06 -5.69 16 21 C -0.12 -0.37 8.66 -39.57 -0.34 -0.71 16 22 C -0.17 -0.46 9.04 -39.46 -0.36 -0.82 16 23 H 0.06 -0.05 7.66 -51.93 -0.40 -0.45 16 24 H 0.06 -0.06 7.66 -51.93 -0.40 -0.46 16 25 H 0.10 -0.17 8.14 -51.93 -0.42 -0.59 16 26 H 0.06 0.01 7.65 -51.93 -0.40 -0.38 16 27 H 0.06 -0.01 7.68 -51.93 -0.40 -0.41 16 28 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 29 H 0.08 0.15 7.82 -51.93 -0.41 -0.26 16 30 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 31 H 0.07 0.14 8.14 -51.93 -0.42 -0.29 16 32 H 0.38 -0.93 9.08 45.56 0.41 -0.52 16 33 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 35 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 36 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 37 H 0.14 0.20 6.30 -52.49 -0.33 -0.13 16 38 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 39 H 0.38 -1.88 8.74 45.56 0.40 -1.48 16 40 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 41 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 42 H 0.12 0.26 4.87 -52.49 -0.26 0.00 16 43 H 0.14 0.05 6.30 -52.49 -0.33 -0.29 16 LS Contribution 342.12 15.07 5.16 5.16 Total: 0.00 -8.03 342.12 -9.21 -17.24 By element: Atomic # 1 Polarization: -3.54 SS G_CDS: -5.94 Total: -9.48 kcal Atomic # 6 Polarization: -0.45 SS G_CDS: -1.77 Total: -2.22 kcal Atomic # 8 Polarization: -3.41 SS G_CDS: -1.59 Total: -5.00 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: -5.06 Total: -5.69 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -8.03 -9.21 -17.24 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_34849_16737256.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.453 kcal (2) G-P(sol) polarization free energy of solvation -8.033 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.486 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.211 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.244 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.697 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds