Wall clock time and date at job start Tue Mar 9 2021 15:12:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47404 * 2 1 4 4 C 1.50705 * 109.46988 * 119.99725 * 2 1 3 5 5 C 1.38350 * 119.94653 * 75.00236 * 4 2 1 6 6 Cl 1.73605 * 119.97315 * 359.97438 * 5 4 2 7 7 C 1.38304 * 120.05174 * 180.02562 * 5 4 2 8 8 C 1.38646 * 119.94257 * 359.97133 * 7 5 4 9 9 O 1.35921 * 120.05019 * 180.02562 * 8 7 5 10 10 C 1.42899 * 117.00418 * 0.02562 * 9 8 7 11 11 C 1.53002 * 109.47262 * 179.97438 * 10 9 8 12 12 H 1.09002 * 109.47067 * 55.00089 * 11 10 9 13 13 C 1.53005 * 109.46982 * 174.99741 * 11 10 9 14 14 C 1.52999 * 109.47159 * 179.97438 * 13 11 10 15 15 C 1.52997 * 109.47317 * 300.00546 * 14 13 11 16 16 H 1.09002 * 109.47153 * 299.99641 * 15 14 13 17 17 O 1.42896 * 109.46906 * 179.97438 * 15 14 13 18 18 C 1.53000 * 109.47060 * 59.99960 * 15 14 13 19 19 C 1.52997 * 109.47143 * 295.00072 * 11 10 9 20 20 C 1.38865 * 119.89582 * 0.28357 * 8 7 5 21 21 Cl 1.73600 * 120.02375 * 179.69984 * 20 8 7 22 22 C 1.38210 * 119.94569 * 359.46407 * 20 8 7 23 23 H 0.96691 * 113.99709 * 300.00057 * 1 2 3 24 24 H 1.09000 * 109.47533 * 240.00053 * 2 1 3 25 25 H 1.48506 * 109.99984 * 300.00110 * 3 2 1 26 26 H 1.48503 * 109.99952 * 61.31567 * 3 2 1 27 27 H 1.07999 * 120.02919 * 179.97438 * 7 5 4 28 28 H 1.08997 * 109.47154 * 59.99828 * 10 9 8 29 29 H 1.08999 * 109.46794 * 299.99985 * 10 9 8 30 30 H 1.09002 * 109.46935 * 60.00267 * 13 11 10 31 31 H 1.09000 * 109.47360 * 300.00293 * 13 11 10 32 32 H 1.08996 * 109.46929 * 179.97438 * 14 13 11 33 33 H 1.09002 * 109.46716 * 60.00455 * 14 13 11 34 34 H 0.96703 * 114.00193 * 180.02562 * 17 15 14 35 35 H 1.08992 * 109.47399 * 59.99823 * 18 15 14 36 36 H 1.09004 * 109.46724 * 180.02562 * 18 15 14 37 37 H 1.09002 * 109.46695 * 299.99691 * 19 11 10 38 38 H 1.08993 * 109.47194 * 59.99677 * 19 11 10 39 39 H 1.07998 * 119.97207 * 180.25689 * 22 20 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.8690 -2.0905 1.3051 6 17 1.2119 -3.0018 -0.0184 7 6 2.3289 -2.7446 2.4336 8 6 2.8532 -2.0161 3.4903 9 8 3.3062 -2.6567 4.6002 10 6 3.2123 -4.0826 4.6101 11 6 3.7674 -4.6212 5.9302 12 1 3.2493 -4.1457 6.7631 13 6 3.5533 -6.1348 5.9938 14 6 4.1089 -6.6735 7.3136 15 6 5.6051 -6.3658 7.4007 16 1 6.1229 -6.8412 6.5676 17 8 6.1238 -6.8684 8.6337 18 6 5.8190 -4.8522 7.3372 19 6 5.2635 -4.3134 6.0178 20 6 2.9097 -0.6306 3.4153 21 17 3.5583 0.2853 4.7397 22 6 2.4537 0.0182 2.2833 23 1 -0.3932 0.4417 0.7650 24 1 1.7924 -0.5138 -0.8900 25 1 1.5616 2.4679 -1.2085 26 1 1.5879 2.4585 1.2242 27 1 2.2797 -3.8219 2.4915 28 1 3.7896 -4.4905 3.7803 29 1 2.1684 -4.3787 4.5066 30 1 4.0715 -6.6103 5.1609 31 1 2.4874 -6.3541 5.9313 32 1 3.9560 -7.7517 7.3591 33 1 3.5912 -6.1981 8.1467 34 1 7.0694 -6.7081 8.7571 35 1 5.3013 -4.3768 8.1702 36 1 6.8850 -4.6330 7.3987 37 1 5.7815 -4.7890 5.1850 38 1 5.4159 -3.2352 5.9725 39 1 2.5013 1.0954 2.2228 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_7874536_16737256.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:12:47 Heat of formation + Delta-G solvation = -118.294090 kcal Electronic energy + Delta-G solvation = -24148.765555 eV Core-core repulsion = 20302.351401 eV Total energy + Delta-G solvation = -3846.414154 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.062 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -41.72097 -40.35676 -39.34230 -37.85434 -37.65401 -37.10413 -36.65490 -32.60070 -32.15696 -31.92938 -31.26978 -27.35178 -26.22006 -24.31817 -23.90397 -22.86470 -22.16921 -21.00975 -19.70154 -18.54632 -18.25078 -17.87889 -17.33417 -16.90988 -16.52092 -16.43496 -15.97987 -15.68457 -15.58672 -15.53136 -15.01321 -14.64074 -14.55781 -14.35894 -13.90673 -13.63909 -13.46030 -13.44046 -13.32718 -12.89460 -12.81045 -12.63262 -12.30709 -12.19310 -12.01552 -11.92196 -11.79429 -11.76550 -11.72485 -11.66725 -11.21057 -10.78234 -10.70025 -10.11564 -9.38545 -5.04869 -0.31277 -0.15021 0.87198 1.07650 1.16076 1.47907 1.79689 1.87431 2.11050 3.08214 3.26166 3.30940 3.47159 3.49829 3.57589 3.61114 3.68741 3.92296 3.95824 4.01879 4.10529 4.19622 4.21150 4.22433 4.30031 4.34198 4.36220 4.45285 4.53746 4.61465 4.68103 4.84107 4.88244 4.94025 4.98025 5.05098 5.05499 5.10289 5.22461 5.31648 5.97587 6.33255 6.66214 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.519 6.519 2 C -0.070 4.070 3 Si 0.686 3.314 4 C -0.138 4.138 5 C 0.033 3.967 6 Cl -0.041 7.041 7 C -0.194 4.194 8 C 0.163 3.837 9 O -0.292 6.292 10 C 0.058 3.942 11 C -0.087 4.087 12 H 0.087 0.913 13 C -0.110 4.110 14 C -0.111 4.111 15 C 0.103 3.897 16 H 0.055 0.945 17 O -0.569 6.569 18 C -0.152 4.152 19 C -0.112 4.112 20 C -0.064 4.064 21 Cl -0.041 7.041 22 C -0.064 4.064 23 H 0.375 0.625 24 H 0.123 0.877 25 H -0.251 1.251 26 H -0.255 1.255 27 H 0.150 0.850 28 H 0.069 0.931 29 H 0.069 0.931 30 H 0.069 0.931 31 H 0.074 0.926 32 H 0.074 0.926 33 H 0.072 0.928 34 H 0.379 0.621 35 H 0.072 0.928 36 H 0.067 0.933 37 H 0.064 0.936 38 H 0.076 0.924 39 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.825 -0.687 -0.368 2.930 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.325 6.325 2 C -0.180 4.180 3 Si 0.586 3.414 4 C -0.140 4.140 5 C 0.005 3.995 6 Cl -0.012 7.012 7 C -0.213 4.213 8 C 0.115 3.885 9 O -0.205 6.205 10 C -0.017 4.017 11 C -0.105 4.105 12 H 0.105 0.895 13 C -0.148 4.148 14 C -0.149 4.149 15 C 0.044 3.956 16 H 0.073 0.927 17 O -0.375 6.375 18 C -0.190 4.190 19 C -0.149 4.149 20 C -0.092 4.092 21 Cl -0.012 7.012 22 C -0.082 4.082 23 H 0.223 0.777 24 H 0.140 0.860 25 H -0.175 1.175 26 H -0.180 1.180 27 H 0.167 0.833 28 H 0.087 0.913 29 H 0.087 0.913 30 H 0.088 0.912 31 H 0.093 0.907 32 H 0.092 0.908 33 H 0.091 0.909 34 H 0.227 0.773 35 H 0.091 0.909 36 H 0.085 0.915 37 H 0.083 0.917 38 H 0.094 0.906 39 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 2.160 -0.284 -0.665 2.278 hybrid contribution -0.526 -0.235 0.342 0.670 sum 1.634 -0.519 -0.323 1.745 Atomic orbital electron populations 1.86667 1.16952 1.79821 1.49068 1.24971 0.84493 1.10992 0.97510 0.94944 0.91515 0.74183 0.80735 1.19999 1.03871 0.92190 0.97897 1.20573 0.97248 0.91424 0.90215 1.98420 1.83746 1.73467 1.45561 1.21113 1.05839 1.01244 0.93151 1.18468 0.93279 0.90128 0.86581 1.86192 1.77374 1.21731 1.35198 1.23078 1.01478 0.77488 0.99656 1.21232 0.97169 0.95881 0.96227 0.89479 1.21480 1.01820 0.93502 0.97957 1.21434 0.93817 1.01947 0.97694 1.21844 0.94974 0.92542 0.86240 0.92716 1.86518 1.29041 1.82173 1.39770 1.22268 1.01595 0.96424 0.98701 1.21513 0.94085 1.02046 0.97277 1.20131 1.07096 0.89110 0.92865 1.98406 1.84481 1.72821 1.45513 1.20876 0.96147 1.00765 0.90444 0.77723 0.85960 1.17510 1.17973 0.83264 0.91261 0.91278 0.91190 0.90704 0.90773 0.90904 0.77346 0.90906 0.91459 0.91710 0.90553 0.83005 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.35 12.82 -35.23 -0.45 -0.80 16 2 C -0.07 0.04 2.09 36.01 0.08 0.11 16 3 Si 0.69 -1.05 30.24 -169.99 -5.14 -6.19 16 4 C -0.14 0.03 5.26 -104.57 -0.55 -0.52 16 5 C 0.03 0.01 6.31 -39.52 -0.25 -0.24 16 6 Cl -0.04 -0.04 27.58 -51.86 -1.43 -1.47 16 7 C -0.19 0.05 8.82 -39.41 -0.35 -0.30 16 8 C 0.16 0.08 6.68 -39.20 -0.26 -0.19 16 9 O -0.29 -0.07 9.13 -19.49 -0.18 -0.25 16 10 C 0.06 -0.12 4.12 37.16 0.15 0.03 16 11 C -0.09 0.18 2.43 -90.62 -0.22 -0.04 16 12 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 13 C -0.11 0.28 5.20 -26.73 -0.14 0.14 16 14 C -0.11 0.10 5.57 -26.73 -0.15 -0.05 16 15 C 0.10 -0.08 3.47 -26.73 -0.09 -0.17 16 16 H 0.05 -0.07 8.14 -51.93 -0.42 -0.50 16 17 O -0.57 -0.40 13.32 -35.23 -0.47 -0.87 16 18 C -0.15 0.21 5.54 -26.75 -0.15 0.06 16 19 C -0.11 0.19 5.10 -26.75 -0.14 0.05 16 20 C -0.06 -0.04 6.33 -39.36 -0.25 -0.29 16 21 Cl -0.04 -0.05 28.50 -51.86 -1.48 -1.53 16 22 C -0.06 0.03 8.43 -39.58 -0.33 -0.31 16 23 H 0.38 -0.83 8.70 45.56 0.40 -0.43 16 24 H 0.12 -0.09 7.40 -51.93 -0.38 -0.47 16 25 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 26 H -0.25 0.04 6.68 56.52 0.38 0.42 16 27 H 0.15 -0.28 6.30 -52.49 -0.33 -0.61 16 28 H 0.07 -0.21 7.66 -51.93 -0.40 -0.61 16 29 H 0.07 -0.20 7.66 -51.93 -0.40 -0.60 16 30 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 31 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 32 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 34 H 0.38 -1.17 9.08 45.56 0.41 -0.75 16 35 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 36 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 37 H 0.06 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.08 -0.05 7.82 -51.93 -0.41 -0.45 16 39 H 0.15 -0.26 4.85 -52.49 -0.25 -0.51 16 LS Contribution 343.51 15.07 5.18 5.18 Total: 0.00 -5.43 343.51 -11.01 -16.44 By element: Atomic # 1 Polarization: -4.42 SS G_CDS: -4.39 Total: -8.81 kcal Atomic # 6 Polarization: 0.95 SS G_CDS: -2.65 Total: -1.70 kcal Atomic # 8 Polarization: -0.82 SS G_CDS: -1.10 Total: -1.92 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: -5.14 Total: -6.19 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -2.91 Total: -3.00 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -5.43 -11.01 -16.44 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_7874536_16737256.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.858 kcal (2) G-P(sol) polarization free energy of solvation -5.427 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.286 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.009 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.436 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.294 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds