Wall clock time and date at job start Tue Mar 9 2021 15:24:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35997 * 116.99914 * 2 1 4 4 C 1.39122 * 120.06896 * 180.02562 * 3 2 1 5 5 O 1.36015 * 120.07265 * 359.94914 * 4 3 2 6 6 C 1.42899 * 116.99851 * 90.00544 * 5 4 3 7 7 C 1.53003 * 109.47059 * 179.97438 * 6 5 4 8 8 H 1.08993 * 112.84764 * 43.80291 * 7 6 5 9 9 C 1.53785 * 113.61350 * 174.99724 * 7 6 5 10 10 C 1.53778 * 87.07831 * 139.97665 * 9 7 6 11 11 H 1.09007 * 113.61141 * 89.11474 * 10 9 7 12 12 O 1.42904 * 113.61761 * 219.93239 * 10 9 7 13 13 C 1.53774 * 87.08608 * 334.56814 * 10 9 7 14 14 C 1.38636 * 119.84835 * 180.22718 * 4 3 2 15 15 Br 1.89098 * 120.01005 * 179.74264 * 14 4 3 16 16 C 1.38316 * 119.98339 * 359.46925 * 14 4 3 17 17 C 1.50702 * 119.93610 * 180.27599 * 16 14 4 18 18 O 1.42894 * 109.47226 * 75.24831 * 17 16 14 19 19 Si 1.86295 * 109.47526 * 195.25698 * 17 16 14 20 20 C 1.38251 * 120.13556 * 0.53424 * 16 14 4 21 21 C 1.38235 * 120.15505 * 359.74009 * 20 16 14 22 22 H 1.09001 * 109.47420 * 180.02562 * 1 2 3 23 23 H 1.09006 * 109.46970 * 300.00062 * 1 2 3 24 24 H 1.08998 * 109.47393 * 60.00072 * 1 2 3 25 25 H 1.09003 * 109.47072 * 299.99822 * 6 5 4 26 26 H 1.09000 * 109.47117 * 59.99347 * 6 5 4 27 27 H 1.08993 * 113.61535 * 254.52941 * 9 7 6 28 28 H 1.09004 * 113.61255 * 25.43246 * 9 7 6 29 29 H 0.96694 * 113.99820 * 180.02562 * 12 10 9 30 30 H 1.09000 * 113.61418 * 270.88545 * 13 10 9 31 31 H 1.09003 * 113.61756 * 139.97544 * 13 10 9 32 32 H 1.09008 * 109.46793 * 315.25645 * 17 16 14 33 33 H 0.96709 * 113.99365 * 60.00616 * 18 17 16 34 34 H 1.48504 * 109.99981 * 58.68019 * 19 17 16 35 35 H 1.48496 * 110.00156 * 179.97438 * 19 17 16 36 36 H 1.08005 * 119.92504 * 179.72333 * 20 16 14 37 37 H 1.07998 * 119.99930 * 180.02562 * 21 20 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4356 1.2863 -0.0005 5 8 4.1792 0.1474 0.0000 6 6 4.5335 -0.3966 -1.2730 7 6 5.3634 -1.6662 -1.0720 8 1 4.9593 -2.3177 -0.2972 9 6 5.6947 -2.3995 -2.3825 10 6 7.0930 -2.6533 -1.7951 11 1 7.1632 -3.5750 -1.2174 12 8 8.1484 -2.5143 -2.7485 13 6 6.8716 -1.4004 -0.9314 14 6 4.0602 2.5239 0.0042 15 35 5.9482 2.6305 0.0109 16 6 3.3021 3.6808 -0.0016 17 6 3.9822 5.0256 -0.0027 18 8 4.5081 5.2924 -1.3043 19 14 2.7488 6.3458 0.4515 20 6 1.9216 3.6060 -0.0010 21 6 1.2929 2.3750 0.0000 22 1 -0.3634 -1.0277 0.0005 23 1 -0.3633 0.5139 0.8900 24 1 -0.3634 0.5138 -0.8900 25 1 3.6280 -0.6383 -1.8296 26 1 5.1183 0.3349 -1.8307 27 1 5.1127 -3.3087 -2.5332 28 1 5.7000 -1.7493 -3.2574 29 1 9.0302 -2.6731 -2.3850 30 1 7.1986 -0.4771 -1.4096 31 1 7.2396 -1.5031 0.0894 32 1 4.7950 5.0223 0.7238 33 1 3.8392 5.3104 -2.0025 34 1 2.1712 6.0624 1.7900 35 1 3.4073 7.6768 0.4546 36 1 1.3330 4.5116 -0.0010 37 1 0.2143 2.3195 0.0000 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_8767664_11354860.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:24:38 Heat of formation + Delta-G solvation = -88.792864 kcal Electronic energy + Delta-G solvation = -22764.034741 eV Core-core repulsion = 19135.536865 eV Total energy + Delta-G solvation = -3628.497876 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.034 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -41.79339 -40.43030 -39.34241 -38.78824 -37.02906 -35.93545 -33.15872 -31.86348 -30.43258 -29.00331 -28.45715 -26.69218 -26.31654 -23.84354 -23.15698 -22.47040 -20.54549 -19.47760 -18.57962 -18.49293 -18.26151 -17.56952 -17.07073 -16.46046 -16.35357 -16.06742 -15.95385 -15.72778 -15.28428 -14.93932 -14.73293 -14.51825 -13.91730 -13.78590 -13.58739 -13.40562 -13.22752 -12.71018 -12.54050 -12.40344 -12.32617 -12.26615 -12.06490 -11.82781 -11.61566 -11.38434 -11.03237 -10.82319 -10.68015 -10.44840 -9.77088 -9.32165 -5.10904 -0.23711 -0.03854 0.58001 1.21120 1.59799 1.93707 2.05821 2.12468 2.60092 3.28061 3.43082 3.48631 3.53240 3.61113 3.68920 3.78138 3.86796 3.95324 3.97656 4.06692 4.08418 4.20851 4.33963 4.37805 4.43699 4.47051 4.54419 4.72018 4.78547 4.80965 4.82953 4.85269 5.01568 5.03935 5.17648 5.20956 5.42670 5.97195 6.49286 6.55863 6.73202 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.301 6.301 3 C 0.123 3.877 4 C 0.092 3.908 5 O -0.311 6.311 6 C 0.079 3.921 7 C -0.105 4.105 8 H 0.104 0.896 9 C -0.120 4.120 10 C 0.075 3.925 11 H 0.084 0.916 12 O -0.560 6.560 13 C -0.161 4.161 14 C -0.054 4.054 15 Br -0.013 7.013 16 C -0.121 4.121 17 C -0.069 4.069 18 O -0.527 6.527 19 Si 0.684 3.316 20 C -0.073 4.073 21 C -0.180 4.180 22 H 0.105 0.895 23 H 0.059 0.941 24 H 0.059 0.941 25 H 0.057 0.943 26 H 0.058 0.942 27 H 0.079 0.921 28 H 0.092 0.908 29 H 0.379 0.621 30 H 0.091 0.909 31 H 0.072 0.928 32 H 0.118 0.882 33 H 0.376 0.624 34 H -0.254 1.254 35 H -0.250 1.250 36 H 0.143 0.857 37 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.398 -0.461 -1.245 5.559 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.213 6.213 3 C 0.076 3.924 4 C 0.045 3.955 5 O -0.228 6.228 6 C 0.005 3.995 7 C -0.123 4.123 8 H 0.123 0.877 9 C -0.157 4.157 10 C 0.016 3.984 11 H 0.101 0.899 12 O -0.366 6.366 13 C -0.199 4.199 14 C -0.134 4.134 15 Br 0.073 6.927 16 C -0.124 4.124 17 C -0.180 4.180 18 O -0.332 6.332 19 Si 0.585 3.415 20 C -0.091 4.091 21 C -0.199 4.199 22 H 0.124 0.876 23 H 0.078 0.922 24 H 0.078 0.922 25 H 0.076 0.924 26 H 0.077 0.923 27 H 0.097 0.903 28 H 0.111 0.889 29 H 0.227 0.773 30 H 0.109 0.891 31 H 0.091 0.909 32 H 0.136 0.864 33 H 0.223 0.777 34 H -0.179 1.179 35 H -0.175 1.175 36 H 0.160 0.840 37 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -4.676 0.062 -0.583 4.713 hybrid contribution 0.066 -0.427 0.530 0.684 sum -4.611 -0.365 -0.053 4.625 Atomic orbital electron populations 1.23208 0.77684 1.04743 1.01662 1.86205 1.21749 1.25434 1.87937 1.19292 0.91017 0.85441 0.96656 1.17559 0.86689 0.86047 1.05220 1.86131 1.69681 1.37423 1.29573 1.22774 0.98286 0.94504 0.83919 1.22268 0.95027 0.95960 0.99069 0.87736 1.23059 0.94477 1.00914 0.97270 1.23309 0.87683 0.96929 0.90459 0.89868 1.86522 1.17907 1.93585 1.38568 1.23746 0.95505 0.99637 1.00972 1.21958 0.92306 0.93740 1.05441 1.96780 1.00188 1.98628 1.97093 1.20119 0.93476 0.95001 1.03774 1.25132 1.05209 0.97728 0.89900 1.86589 1.37486 1.93495 1.15648 0.95093 0.83006 0.77868 0.85510 1.20781 0.92743 0.97546 0.98051 1.21281 1.00853 0.91337 1.06459 0.87628 0.92196 0.92209 0.92442 0.92329 0.90262 0.88932 0.77318 0.89074 0.90882 0.86439 0.77664 1.17894 1.17462 0.84011 0.83736 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.30 -0.43 10.28 -34.25 -0.35 -0.78 16 3 C 0.12 0.20 6.70 -39.12 -0.26 -0.06 16 4 C 0.09 0.28 5.73 -39.11 -0.22 0.06 16 5 O -0.31 -1.13 9.18 -34.30 -0.31 -1.44 16 6 C 0.08 0.14 5.90 37.16 0.22 0.36 16 7 C -0.10 -0.07 4.01 -89.80 -0.36 -0.43 16 8 H 0.10 0.07 8.14 -51.93 -0.42 -0.36 16 9 C -0.12 -0.04 7.47 -25.92 -0.19 -0.23 16 10 C 0.08 0.03 5.21 -25.92 -0.14 -0.11 16 11 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 12 O -0.56 -0.86 13.67 -35.23 -0.48 -1.34 16 13 C -0.16 -0.12 7.47 -25.92 -0.19 -0.32 16 14 C -0.05 -0.14 6.23 -39.41 -0.25 -0.39 16 15 Br -0.01 -0.04 31.43 -68.01 -2.14 -2.18 16 16 C -0.12 -0.09 5.26 -104.59 -0.55 -0.64 16 17 C -0.07 -0.02 2.02 36.01 0.07 0.05 16 18 O -0.53 -0.16 12.71 -35.23 -0.45 -0.61 16 19 Si 0.68 -0.90 29.91 -169.99 -5.08 -5.99 16 20 C -0.07 0.09 8.65 -39.58 -0.34 -0.25 16 21 C -0.18 0.16 9.04 -39.45 -0.36 -0.20 16 22 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 23 H 0.06 -0.21 7.66 -51.93 -0.40 -0.61 16 24 H 0.06 -0.24 7.66 -51.93 -0.40 -0.64 16 25 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 26 H 0.06 0.12 7.84 -51.93 -0.41 -0.29 16 27 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.09 0.09 8.10 -51.93 -0.42 -0.33 16 29 H 0.38 -0.92 9.12 45.56 0.42 -0.51 16 30 H 0.09 0.16 7.89 -51.93 -0.41 -0.25 16 31 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 32 H 0.12 0.19 7.21 -51.92 -0.37 -0.19 16 33 H 0.38 -1.42 8.70 45.56 0.40 -1.02 16 34 H -0.25 -0.28 7.11 56.52 0.40 0.13 16 35 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 36 H 0.14 -0.60 5.11 -52.48 -0.27 -0.87 16 37 H 0.15 -0.52 6.30 -52.49 -0.33 -0.85 16 LS Contribution 329.34 15.07 4.96 4.96 Total: 0.00 -7.64 329.34 -9.36 -17.01 By element: Atomic # 1 Polarization: -4.48 SS G_CDS: -3.93 Total: -8.41 kcal Atomic # 6 Polarization: 0.36 SS G_CDS: -1.58 Total: -1.22 kcal Atomic # 8 Polarization: -2.58 SS G_CDS: -1.60 Total: -4.17 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.08 Total: -5.99 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -2.14 Total: -2.18 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -7.64 -9.36 -17.01 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_8767664_11354860.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.786 kcal (2) G-P(sol) polarization free energy of solvation -7.643 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.429 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.363 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.007 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.793 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds