Wall clock time and date at job start Tue Mar 9 2021 15:24:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35997 * 116.99914 * 2 1 4 4 C 1.39122 * 120.06896 * 180.02562 * 3 2 1 5 5 O 1.36015 * 120.07265 * 359.94914 * 4 3 2 6 6 C 1.42899 * 116.99851 * 90.00544 * 5 4 3 7 7 C 1.53003 * 109.47059 * 179.97438 * 6 5 4 8 8 H 1.08993 * 112.84764 * 43.80291 * 7 6 5 9 9 C 1.53785 * 113.61350 * 174.99724 * 7 6 5 10 10 C 1.53778 * 87.07831 * 139.97665 * 9 7 6 11 11 H 1.09007 * 113.61141 * 89.11474 * 10 9 7 12 12 O 1.42904 * 113.61761 * 219.93239 * 10 9 7 13 13 C 1.53774 * 87.08608 * 334.56814 * 10 9 7 14 14 C 1.38636 * 119.84835 * 180.22718 * 4 3 2 15 15 Br 1.89098 * 120.01005 * 179.74264 * 14 4 3 16 16 C 1.38316 * 119.98339 * 359.46925 * 14 4 3 17 17 C 1.50702 * 119.93610 * 180.27599 * 16 14 4 18 18 O 1.42894 * 109.47226 * 75.24831 * 17 16 14 19 19 Si 1.86295 * 109.47526 * 195.25698 * 17 16 14 20 20 C 1.38251 * 120.13556 * 0.53424 * 16 14 4 21 21 C 1.38235 * 120.15505 * 359.74009 * 20 16 14 22 22 H 1.09001 * 109.47420 * 180.02562 * 1 2 3 23 23 H 1.09006 * 109.46970 * 300.00062 * 1 2 3 24 24 H 1.08998 * 109.47393 * 60.00072 * 1 2 3 25 25 H 1.09003 * 109.47072 * 299.99822 * 6 5 4 26 26 H 1.09000 * 109.47117 * 59.99347 * 6 5 4 27 27 H 1.08993 * 113.61535 * 254.52941 * 9 7 6 28 28 H 1.09004 * 113.61255 * 25.43246 * 9 7 6 29 29 H 0.96694 * 113.99820 * 180.02562 * 12 10 9 30 30 H 1.09000 * 113.61418 * 270.88545 * 13 10 9 31 31 H 1.09003 * 113.61756 * 139.97544 * 13 10 9 32 32 H 1.09008 * 109.46793 * 315.25645 * 17 16 14 33 33 H 0.96709 * 113.99365 * 60.00616 * 18 17 16 34 34 H 1.48504 * 109.99981 * 58.68019 * 19 17 16 35 35 H 1.48496 * 110.00156 * 179.97438 * 19 17 16 36 36 H 1.08005 * 119.92504 * 179.72333 * 20 16 14 37 37 H 1.07998 * 119.99930 * 180.02562 * 21 20 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4356 1.2863 -0.0005 5 8 4.1792 0.1474 0.0000 6 6 4.5335 -0.3966 -1.2730 7 6 5.3634 -1.6662 -1.0720 8 1 4.9593 -2.3177 -0.2972 9 6 5.6947 -2.3995 -2.3825 10 6 7.0930 -2.6533 -1.7951 11 1 7.1632 -3.5750 -1.2174 12 8 8.1484 -2.5143 -2.7485 13 6 6.8716 -1.4004 -0.9314 14 6 4.0602 2.5239 0.0042 15 35 5.9482 2.6305 0.0109 16 6 3.3021 3.6808 -0.0016 17 6 3.9822 5.0256 -0.0027 18 8 4.5081 5.2924 -1.3043 19 14 2.7488 6.3458 0.4515 20 6 1.9216 3.6060 -0.0010 21 6 1.2929 2.3750 0.0000 22 1 -0.3634 -1.0277 0.0005 23 1 -0.3633 0.5139 0.8900 24 1 -0.3634 0.5138 -0.8900 25 1 3.6280 -0.6383 -1.8296 26 1 5.1183 0.3349 -1.8307 27 1 5.1127 -3.3087 -2.5332 28 1 5.7000 -1.7493 -3.2574 29 1 9.0302 -2.6731 -2.3850 30 1 7.1986 -0.4771 -1.4096 31 1 7.2396 -1.5031 0.0894 32 1 4.7950 5.0223 0.7238 33 1 3.8392 5.3104 -2.0025 34 1 2.1712 6.0624 1.7900 35 1 3.4073 7.6768 0.4546 36 1 1.3330 4.5116 -0.0010 37 1 0.2143 2.3195 0.0000 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_34_8767664_11354860.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:24:38 Heat of formation + Delta-G solvation = -89.083192 kcal Electronic energy + Delta-G solvation = -22764.047330 eV Core-core repulsion = 19135.536865 eV Total energy + Delta-G solvation = -3628.510465 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.034 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -41.80622 -40.48350 -39.32101 -38.86497 -37.02779 -36.01087 -33.22068 -31.87434 -30.49109 -29.01275 -28.37732 -26.75164 -26.28418 -23.88020 -23.19605 -22.48377 -20.60785 -19.47386 -18.60150 -18.51068 -18.31684 -17.58029 -17.05033 -16.49866 -16.33260 -16.09627 -15.93774 -15.76043 -15.26350 -14.94114 -14.76576 -14.51335 -13.96985 -13.79502 -13.57007 -13.48828 -13.19934 -12.68210 -12.47270 -12.41691 -12.33335 -12.31794 -12.11777 -11.85682 -11.63846 -11.45736 -11.17349 -10.93780 -10.74041 -10.44238 -9.84309 -9.33016 -5.03383 -0.26203 -0.04863 0.47261 1.25935 1.65837 1.97694 2.06500 2.20823 2.55097 3.29047 3.44125 3.49941 3.56152 3.58932 3.74922 3.81705 3.88784 3.93138 4.06480 4.15542 4.24578 4.30553 4.34682 4.39594 4.42449 4.44098 4.67828 4.73102 4.73906 4.77128 4.81137 4.90872 4.96098 5.05295 5.12288 5.29068 5.37068 6.01007 6.43451 6.79027 6.84866 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.012 3.988 2 O -0.324 6.324 3 C 0.113 3.887 4 C 0.065 3.935 5 O -0.327 6.327 6 C 0.083 3.917 7 C -0.101 4.101 8 H 0.107 0.893 9 C -0.119 4.119 10 C 0.077 3.923 11 H 0.101 0.899 12 O -0.580 6.580 13 C -0.160 4.160 14 C -0.071 4.071 15 Br -0.033 7.033 16 C -0.127 4.127 17 C -0.083 4.083 18 O -0.544 6.544 19 Si 0.794 3.206 20 C -0.065 4.065 21 C -0.171 4.171 22 H 0.114 0.886 23 H 0.071 0.929 24 H 0.076 0.924 25 H 0.057 0.943 26 H 0.049 0.951 27 H 0.091 0.909 28 H 0.083 0.917 29 H 0.394 0.606 30 H 0.077 0.923 31 H 0.073 0.927 32 H 0.098 0.902 33 H 0.394 0.606 34 H -0.281 1.281 35 H -0.297 1.297 36 H 0.177 0.823 37 H 0.178 0.822 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.362 -0.308 -1.398 7.500 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.237 6.237 3 C 0.065 3.935 4 C 0.018 3.982 5 O -0.245 6.245 6 C 0.009 3.991 7 C -0.120 4.120 8 H 0.125 0.875 9 C -0.156 4.156 10 C 0.018 3.982 11 H 0.119 0.881 12 O -0.389 6.389 13 C -0.198 4.198 14 C -0.152 4.152 15 Br 0.053 6.947 16 C -0.130 4.130 17 C -0.192 4.192 18 O -0.352 6.352 19 Si 0.698 3.302 20 C -0.083 4.083 21 C -0.189 4.189 22 H 0.132 0.868 23 H 0.090 0.910 24 H 0.095 0.905 25 H 0.076 0.924 26 H 0.068 0.932 27 H 0.109 0.891 28 H 0.102 0.898 29 H 0.244 0.756 30 H 0.095 0.905 31 H 0.091 0.909 32 H 0.115 0.885 33 H 0.244 0.756 34 H -0.207 1.207 35 H -0.225 1.225 36 H 0.194 0.806 37 H 0.195 0.805 Dipole moment (debyes) X Y Z Total from point charges -6.636 0.182 -0.760 6.682 hybrid contribution 0.668 -0.457 0.583 0.998 sum -5.968 -0.276 -0.176 5.977 Atomic orbital electron populations 1.23487 0.75718 1.05916 1.03024 1.86173 1.23878 1.25699 1.87965 1.19444 0.90685 0.86448 0.96898 1.17837 0.87635 0.85882 1.06852 1.86096 1.70107 1.37958 1.30290 1.22756 0.98210 0.94589 0.83578 1.22248 0.94713 0.95586 0.99417 0.87521 1.23053 0.94840 1.01131 0.96620 1.23390 0.87413 0.97179 0.90188 0.88138 1.86478 1.19163 1.93730 1.39501 1.23693 0.95682 0.99454 1.00973 1.22084 0.91519 0.94568 1.06992 1.96733 1.02069 1.98656 1.97251 1.20301 0.94405 0.94426 1.03826 1.25404 1.05408 0.98664 0.89686 1.86549 1.38941 1.93467 1.16244 0.93942 0.80312 0.73234 0.82681 1.21152 0.91955 0.98878 0.96280 1.21665 1.02332 0.90374 1.04575 0.86753 0.90999 0.90531 0.92430 0.93235 0.89062 0.89830 0.75556 0.90474 0.90854 0.88481 0.75647 1.20721 1.22539 0.80580 0.80500 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.32 -0.90 10.28 -79.63 -0.82 -1.72 16 3 C 0.11 0.35 6.70 22.57 0.15 0.50 16 4 C 0.06 0.48 5.73 22.58 0.13 0.61 16 5 O -0.33 -3.00 9.18 -79.83 -0.73 -3.73 16 6 C 0.08 0.45 5.90 71.98 0.42 0.87 16 7 C -0.10 -0.27 4.01 -10.26 -0.04 -0.31 16 8 H 0.11 0.24 8.14 -2.39 -0.02 0.22 16 9 C -0.12 -0.17 7.47 31.12 0.23 0.06 16 10 C 0.08 0.10 5.21 31.12 0.16 0.26 16 11 H 0.10 -0.23 8.14 -2.38 -0.02 -0.25 16 12 O -0.58 -2.10 13.67 -148.98 -2.04 -4.14 16 13 C -0.16 -0.48 7.47 31.12 0.23 -0.25 16 14 C -0.07 -0.47 6.23 22.38 0.14 -0.33 16 15 Br -0.03 -0.28 31.43 -20.37 -0.64 -0.92 16 16 C -0.13 -0.18 5.26 -19.84 -0.10 -0.29 16 17 C -0.08 -0.07 2.02 71.24 0.14 0.07 16 18 O -0.54 -0.57 12.71 -148.98 -1.89 -2.46 16 19 Si 0.79 -2.81 29.91 68.60 2.05 -0.76 16 20 C -0.06 0.27 8.65 22.27 0.19 0.47 16 21 C -0.17 0.61 9.04 22.35 0.20 0.81 16 22 H 0.11 -1.00 8.14 -2.39 -0.02 -1.02 16 23 H 0.07 -0.65 7.66 -2.38 -0.02 -0.67 16 24 H 0.08 -0.77 7.66 -2.39 -0.02 -0.79 16 25 H 0.06 0.26 8.14 -2.39 -0.02 0.24 16 26 H 0.05 0.33 7.84 -2.39 -0.02 0.31 16 27 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 28 H 0.08 0.27 8.10 -2.38 -0.02 0.25 16 29 H 0.39 -1.75 9.12 -74.06 -0.68 -2.42 16 30 H 0.08 0.45 7.89 -2.39 -0.02 0.43 16 31 H 0.07 0.19 8.14 -2.39 -0.02 0.17 16 32 H 0.10 0.46 7.21 -2.38 -0.02 0.44 16 33 H 0.39 -3.11 8.70 -74.05 -0.64 -3.76 16 34 H -0.28 -0.26 7.11 99.48 0.71 0.45 16 35 H -0.30 -1.29 7.11 99.48 0.71 -0.59 16 36 H 0.18 -2.08 5.11 -2.91 -0.01 -2.09 16 37 H 0.18 -1.87 6.30 -2.91 -0.02 -1.89 16 Total: 0.00 -20.05 329.34 -1.26 -21.31 By element: Atomic # 1 Polarization: -10.92 SS G_CDS: -0.17 Total: -11.09 kcal Atomic # 6 Polarization: 0.53 SS G_CDS: 2.98 Total: 3.50 kcal Atomic # 8 Polarization: -6.57 SS G_CDS: -5.48 Total: -12.05 kcal Atomic # 14 Polarization: -2.81 SS G_CDS: 2.05 Total: -0.76 kcal Atomic # 35 Polarization: -0.28 SS G_CDS: -0.64 Total: -0.92 kcal Total: -20.05 -1.26 -21.31 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_8767664_11354860.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.771 kcal (2) G-P(sol) polarization free energy of solvation -20.053 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.824 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.260 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.312 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.083 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds