Wall clock time and date at job start Tue Mar 9 2021 12:55:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86306 * 109.47086 * 2 1 4 4 C 1.50692 * 109.47384 * 120.00079 * 2 1 3 5 5 C 1.33393 * 125.20208 * 65.29001 * 4 2 1 6 6 C 1.38423 * 114.91945 * 180.20858 * 5 4 2 7 7 S 1.76205 * 122.53879 * 179.76081 * 6 5 4 8 8 O 1.42094 * 106.40048 * 156.19493 * 7 6 5 9 9 O 1.42098 * 106.40429 * 23.27026 * 7 6 5 10 10 N 1.65604 * 107.21449 * 269.73095 * 7 6 5 11 11 C 1.46500 * 119.99632 * 65.00196 * 10 7 6 12 12 H 1.08996 * 109.47738 * 24.99945 * 11 10 7 13 13 C 1.53002 * 109.47089 * 144.99602 * 11 10 7 14 14 C 1.52997 * 109.47415 * 179.97438 * 13 11 10 15 15 C 1.53006 * 109.47164 * 300.00027 * 14 13 11 16 16 H 1.09000 * 109.47050 * 300.00004 * 15 14 13 17 17 O 1.42895 * 109.47000 * 179.97438 * 15 14 13 18 18 C 1.35702 * 116.99512 * 149.99992 * 17 15 14 19 19 N 1.32225 * 119.69378 * 359.73167 * 18 17 15 20 20 C 1.31981 * 121.65834 * 179.70955 * 19 18 17 21 21 C 1.38033 * 120.86013 * 0.56272 * 20 19 18 22 22 C 1.38835 * 119.29922 * 359.72616 * 21 20 19 23 23 C 1.38459 * 118.47298 * 359.97438 * 22 21 20 24 24 Cl 1.73605 * 120.45429 * 180.02562 * 23 22 21 25 25 C 1.52999 * 109.46626 * 59.99702 * 15 14 13 26 26 C 1.52996 * 109.47249 * 264.99476 * 11 10 7 27 27 C 1.33390 * 114.92341 * 359.48880 * 6 5 4 28 28 S 1.75883 * 125.20409 * 244.97520 * 4 2 1 29 29 H 0.96702 * 113.99653 * 299.99439 * 1 2 3 30 30 H 1.09000 * 109.46798 * 240.00746 * 2 1 3 31 31 H 1.48493 * 110.00091 * 178.68370 * 3 2 1 32 32 H 1.48498 * 109.99952 * 300.00414 * 3 2 1 33 33 H 1.07998 * 122.54038 * 359.96119 * 5 4 2 34 34 H 0.96993 * 120.00354 * 244.99790 * 10 7 6 35 35 H 1.09000 * 109.46986 * 59.99786 * 13 11 10 36 36 H 1.09001 * 109.47601 * 300.00509 * 13 11 10 37 37 H 1.09001 * 109.46922 * 180.02562 * 14 13 11 38 38 H 1.09000 * 109.47140 * 59.99976 * 14 13 11 39 39 H 1.07998 * 119.57210 * 180.28768 * 20 19 18 40 40 H 1.08004 * 120.35083 * 179.74847 * 21 20 19 41 41 H 1.07994 * 120.76113 * 180.02562 * 22 21 20 42 42 H 1.09000 * 109.47160 * 60.00369 * 25 15 14 43 43 H 1.09002 * 109.46719 * 180.02562 * 25 15 14 44 44 H 1.09000 * 109.47054 * 300.00354 * 26 11 10 45 45 H 1.09001 * 109.46997 * 60.00087 * 26 11 10 46 46 H 1.07997 * 125.20363 * 180.25084 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.7582 -2.0063 1.4946 6 6 2.3057 -2.4358 2.6913 7 16 2.1896 -4.1058 3.2414 8 8 3.2722 -4.3087 4.1391 9 8 1.9844 -4.8977 2.0795 10 7 0.8056 -4.2299 4.1423 11 6 -0.5008 -4.0362 3.5083 12 1 -0.4255 -4.2611 2.4445 13 6 -1.5253 -4.9703 4.1556 14 6 -2.8898 -4.7676 3.4940 15 6 -3.3355 -3.3156 3.6785 16 1 -3.4107 -3.0910 4.7425 17 8 -4.6097 -3.1262 3.0601 18 6 -5.4260 -2.1894 3.6055 19 7 -5.0247 -1.5078 4.6652 20 6 -5.7845 -0.5843 5.2233 21 6 -7.0399 -0.3031 4.7232 22 6 -7.5016 -1.0003 3.6149 23 6 -6.6786 -1.9587 3.0481 24 17 -7.2039 -2.8604 1.6607 25 6 -2.3110 -2.3816 3.0312 26 6 -0.9468 -2.5843 3.6923 27 6 2.9328 -1.4910 3.3937 28 16 2.8426 0.0407 2.5339 29 1 -0.3933 0.4416 0.7651 30 1 1.7923 -0.5137 -0.8901 31 1 3.5346 1.7704 0.0321 32 1 1.5615 2.4679 -1.2084 33 1 1.2274 -2.6694 0.8276 34 1 0.8599 -4.4309 5.0896 35 1 -1.6007 -4.7454 5.2195 36 1 -1.2076 -6.0047 4.0246 37 1 -3.6197 -5.4328 3.9554 38 1 -2.8147 -4.9922 2.4300 39 1 -5.4211 -0.0446 6.0853 40 1 -7.6565 0.4516 5.1889 41 1 -8.4798 -0.7991 3.2039 42 1 -2.2359 -2.6061 1.9673 43 1 -2.6283 -1.3471 3.1631 44 1 -1.0222 -2.3594 4.7562 45 1 -0.2169 -1.9188 3.2312 46 1 3.4209 -1.6432 4.3449 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_12496454_15065232.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:30 Heat of formation + Delta-G solvation = -72.530270 kcal Electronic energy + Delta-G solvation = -35833.984683 eV Core-core repulsion = 30970.381709 eV Total energy + Delta-G solvation = -4863.602974 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 431.051 amu Computer time = 2.15 seconds Orbital eigenvalues (eV) -41.87585 -40.29629 -39.54195 -38.53159 -38.14105 -37.59947 -37.53373 -36.85662 -34.84774 -33.45648 -32.02390 -31.86100 -31.47645 -29.23289 -27.26219 -25.14663 -25.00309 -24.50355 -23.81436 -23.01119 -21.46646 -21.29673 -20.13065 -19.61106 -19.25568 -18.58007 -18.19349 -17.96511 -17.76399 -17.43161 -17.31430 -16.77578 -16.41027 -16.15449 -16.00282 -15.81052 -15.43995 -15.27985 -15.02879 -14.89017 -14.57150 -14.46242 -14.36388 -14.22246 -14.06458 -13.98961 -13.55685 -13.46777 -13.35900 -13.20022 -13.11786 -13.04450 -12.98075 -12.92290 -12.51120 -12.48377 -12.31380 -12.25468 -12.19079 -12.04467 -11.72571 -11.58392 -11.38649 -10.81685 -10.75955 -10.72828 -10.57867 -10.23902 -9.89774 -9.47742 -5.30490 -0.76567 -0.50905 -0.15295 0.07015 0.26579 0.52823 0.96919 1.08359 1.09126 1.46559 1.78570 1.79219 2.03449 2.53920 2.71854 3.14646 3.17857 3.31641 3.44729 3.51837 3.56693 3.64034 3.75848 3.78598 3.85438 3.85940 3.95427 4.06289 4.10569 4.17040 4.19933 4.25138 4.31397 4.33441 4.37302 4.58629 4.62954 4.68056 4.70463 4.85367 4.87701 4.92021 4.92897 4.99774 5.01049 5.02021 5.15357 5.18633 5.31154 5.83885 6.13222 6.34365 6.62352 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.026 4.026 3 Si 0.655 3.345 4 C -0.228 4.228 5 C -0.043 4.043 6 C -0.687 4.687 7 S 2.708 3.292 8 O -0.956 6.956 9 O -0.948 6.948 10 N -1.110 6.110 11 C 0.145 3.855 12 H 0.098 0.902 13 C -0.117 4.117 14 C -0.117 4.117 15 C 0.088 3.912 16 H 0.093 0.907 17 O -0.287 6.287 18 C 0.338 3.662 19 N -0.526 5.526 20 C 0.144 3.856 21 C -0.201 4.201 22 C -0.032 4.032 23 C -0.114 4.114 24 Cl -0.041 7.041 25 C -0.131 4.131 26 C -0.134 4.134 27 C -0.081 4.081 28 S 0.156 5.844 29 H 0.379 0.621 30 H 0.127 0.873 31 H -0.238 1.238 32 H -0.231 1.231 33 H 0.156 0.844 34 H 0.420 0.580 35 H 0.075 0.925 36 H 0.084 0.916 37 H 0.079 0.921 38 H 0.080 0.920 39 H 0.167 0.833 40 H 0.147 0.853 41 H 0.151 0.849 42 H 0.076 0.924 43 H 0.074 0.926 44 H 0.075 0.925 45 H 0.075 0.925 46 H 0.186 0.814 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.745 5.787 5.198 8.633 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.140 4.140 3 Si 0.554 3.446 4 C -0.346 4.346 5 C -0.071 4.071 6 C -0.787 4.787 7 S 2.795 3.205 8 O -0.946 6.946 9 O -0.938 6.938 10 N -0.869 5.869 11 C 0.038 3.962 12 H 0.116 0.884 13 C -0.156 4.156 14 C -0.155 4.155 15 C 0.032 3.968 16 H 0.111 0.889 17 O -0.194 6.194 18 C 0.158 3.842 19 N -0.250 5.250 20 C -0.011 4.011 21 C -0.221 4.221 22 C -0.058 4.058 23 C -0.143 4.143 24 Cl -0.012 7.012 25 C -0.170 4.170 26 C -0.174 4.174 27 C -0.220 4.220 28 S 0.420 5.580 29 H 0.227 0.773 30 H 0.144 0.856 31 H -0.162 1.162 32 H -0.154 1.154 33 H 0.174 0.826 34 H 0.255 0.745 35 H 0.094 0.906 36 H 0.102 0.898 37 H 0.097 0.903 38 H 0.099 0.901 39 H 0.184 0.816 40 H 0.165 0.835 41 H 0.169 0.831 42 H 0.095 0.905 43 H 0.092 0.908 44 H 0.094 0.906 45 H 0.094 0.906 46 H 0.203 0.797 Dipole moment (debyes) X Y Z Total from point charges -1.280 6.497 4.073 7.775 hybrid contribution -1.336 -1.032 -0.292 1.713 sum -2.616 5.465 3.781 7.142 Atomic orbital electron populations 1.86564 1.16384 1.81584 1.49016 1.24439 0.85333 1.09095 0.95103 0.95187 0.82191 0.77344 0.89903 1.25042 1.08757 0.98325 1.02449 1.19604 0.98031 0.94876 0.94634 1.30046 1.15620 1.26482 1.06527 1.01622 0.72272 0.73196 0.73423 1.93616 1.51245 1.84992 1.64749 1.93613 1.85276 1.65331 1.49594 1.55593 1.20380 1.87622 1.23289 1.20979 0.81911 0.95199 0.98063 0.88447 1.21734 0.92991 1.00356 1.00500 1.21605 0.96570 0.94352 1.02998 1.22508 0.79661 0.95822 0.98794 0.88855 1.86386 1.27923 1.51507 1.53549 1.19504 0.87588 0.88423 0.88672 1.67467 1.36858 1.10344 1.10340 1.22588 0.90025 0.91319 0.97203 1.22047 0.98274 1.03385 0.98425 1.21472 0.99244 0.91310 0.93769 1.20952 0.94733 1.02045 0.96612 1.98403 1.89842 1.73430 1.39554 1.21889 0.93852 1.00216 1.01013 1.22038 0.96713 0.96254 1.02358 1.25891 0.97861 0.95548 1.02653 1.84364 1.50518 1.10612 1.12481 0.77333 0.85608 1.16224 1.15419 0.82627 0.74465 0.90611 0.89773 0.90250 0.90137 0.81576 0.83493 0.83090 0.90541 0.90755 0.90583 0.90643 0.79726 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.47 12.88 -35.23 -0.45 0.02 16 2 C -0.03 0.03 2.96 36.00 0.11 0.13 16 3 Si 0.65 -1.03 30.98 -169.99 -5.27 -6.29 16 4 C -0.23 0.16 5.70 -36.01 -0.21 -0.04 16 5 C -0.04 0.00 8.69 -41.21 -0.36 -0.36 16 6 C -0.69 0.08 4.96 -41.21 -0.20 -0.13 16 7 S 2.71 2.43 5.78 -107.50 -0.62 1.81 16 8 O -0.96 -3.40 17.64 -57.17 -1.01 -4.41 16 9 O -0.95 -3.94 16.97 -57.17 -0.97 -4.91 16 10 N -1.11 2.43 5.47 -4.89 -0.03 2.40 16 11 C 0.15 -0.32 2.79 -67.93 -0.19 -0.51 16 12 H 0.10 -0.15 7.50 -51.93 -0.39 -0.54 16 13 C -0.12 0.32 5.45 -26.73 -0.15 0.17 16 14 C -0.12 0.19 5.57 -26.73 -0.15 0.04 16 15 C 0.09 -0.06 2.38 -26.73 -0.06 -0.12 16 16 H 0.09 -0.04 6.98 -51.93 -0.36 -0.40 16 17 O -0.29 -0.46 9.24 -18.81 -0.17 -0.64 16 18 C 0.34 0.53 7.45 -17.09 -0.13 0.40 16 19 N -0.53 -0.29 8.64 -13.30 -0.11 -0.40 16 20 C 0.14 -0.24 11.17 -17.56 -0.20 -0.43 16 21 C -0.20 0.47 10.10 -39.44 -0.40 0.07 16 22 C -0.03 0.03 9.97 -39.28 -0.39 -0.36 16 23 C -0.11 -0.13 6.36 -39.21 -0.25 -0.38 16 24 Cl -0.04 -0.07 28.54 -51.86 -1.48 -1.55 16 25 C -0.13 0.20 5.54 -26.76 -0.15 0.05 16 26 C -0.13 0.36 5.52 -26.76 -0.15 0.22 16 27 C -0.08 0.10 10.70 29.04 0.31 0.41 16 28 S 0.16 -0.27 20.60 -107.50 -2.21 -2.48 16 29 H 0.38 -1.74 8.70 45.56 0.40 -1.34 16 30 H 0.13 -0.09 7.96 -51.93 -0.41 -0.50 16 31 H -0.24 -0.16 7.11 56.52 0.40 0.24 16 32 H -0.23 -0.28 7.11 56.52 0.40 0.13 16 33 H 0.16 0.02 7.96 -52.49 -0.42 -0.40 16 34 H 0.42 -1.73 8.84 -34.47 -0.30 -2.03 16 35 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 36 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 37 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 38 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 39 H 0.17 -0.75 8.06 -52.49 -0.42 -1.17 16 40 H 0.15 -0.71 8.06 -52.48 -0.42 -1.14 16 41 H 0.15 -0.45 8.06 -52.49 -0.42 -0.88 16 42 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 43 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 44 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 45 H 0.07 -0.21 6.20 -51.93 -0.32 -0.53 16 46 H 0.19 -0.56 8.00 -52.49 -0.42 -0.98 16 LS Contribution 419.60 15.07 6.32 6.32 Total: 0.00 -10.33 419.60 -14.22 -24.55 By element: Atomic # 1 Polarization: -7.93 SS G_CDS: -5.66 Total: -13.59 kcal Atomic # 6 Polarization: 1.72 SS G_CDS: -2.56 Total: -0.84 kcal Atomic # 7 Polarization: 2.15 SS G_CDS: -0.14 Total: 2.00 kcal Atomic # 8 Polarization: -7.33 SS G_CDS: -2.61 Total: -9.94 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: -5.27 Total: -6.29 kcal Atomic # 16 Polarization: 2.16 SS G_CDS: -2.84 Total: -0.67 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -1.48 Total: -1.55 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -10.33 -14.22 -24.55 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_12496454_15065232.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.980 kcal (2) G-P(sol) polarization free energy of solvation -10.328 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.308 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.223 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.551 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.530 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.15 seconds