Wall clock time and date at job start Tue Mar 9 2021 12:59:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 H 1.00900 * 109.46708 * 2 1 4 4 C 1.46899 * 109.47188 * 120.00581 * 2 1 3 5 5 C 1.46901 * 109.46798 * 240.00744 * 2 1 3 6 6 C 1.52992 * 109.47618 * 65.99625 * 5 2 1 7 7 H 1.08995 * 109.47409 * 305.46668 * 6 5 2 8 8 C 1.53008 * 109.46887 * 65.46372 * 6 5 2 9 9 C 1.53005 * 109.46797 * 179.97438 * 8 6 5 10 10 C 1.52994 * 109.47433 * 300.00129 * 9 8 6 11 11 H 1.08997 * 109.47303 * 179.97438 * 10 9 8 12 12 N 1.46500 * 109.47205 * 300.00210 * 10 9 8 13 13 S 1.65603 * 120.00114 * 215.00335 * 12 10 9 14 14 O 1.42100 * 106.39705 * 311.45586 * 13 12 10 15 15 O 1.42098 * 106.40023 * 178.53822 * 13 12 10 16 16 C 1.76200 * 107.21857 * 64.99443 * 13 12 10 17 17 C 1.33388 * 125.20211 * 149.99848 * 16 13 12 18 18 C 1.50705 * 122.53847 * 359.96168 * 17 16 13 19 19 O 1.42902 * 109.47277 * 74.99609 * 18 17 16 20 20 Si 1.86297 * 109.46932 * 194.99662 * 18 17 16 21 21 C 1.38420 * 114.92027 * 179.97438 * 17 16 13 22 22 C 1.33384 * 114.92485 * 0.02562 * 21 17 16 23 23 S 1.75877 * 125.20421 * 329.69729 * 16 13 12 24 24 C 1.53001 * 109.47018 * 59.99915 * 10 9 8 25 25 C 1.53000 * 109.47020 * 185.46235 * 6 5 2 26 26 H 1.09001 * 109.47461 * 293.72849 * 1 2 3 27 27 H 1.08999 * 109.47247 * 53.73079 * 1 2 3 28 28 H 1.09005 * 109.47171 * 173.73073 * 1 2 3 29 29 H 1.08995 * 109.47056 * 180.02562 * 4 2 1 30 30 H 1.09004 * 109.46707 * 299.99846 * 4 2 1 31 31 H 1.08997 * 109.47256 * 59.99594 * 4 2 1 32 32 H 1.09004 * 109.46876 * 305.99260 * 5 2 1 33 33 H 1.09002 * 109.46875 * 185.99832 * 5 2 1 34 34 H 1.08997 * 109.47262 * 60.00288 * 8 6 5 35 35 H 1.08994 * 109.46997 * 299.99697 * 8 6 5 36 36 H 1.09001 * 109.46634 * 179.97438 * 9 8 6 37 37 H 1.09007 * 109.46844 * 60.00452 * 9 8 6 38 38 H 0.97001 * 120.00239 * 34.99329 * 12 10 9 39 39 H 1.09000 * 109.47302 * 314.99605 * 18 17 16 40 40 H 0.96696 * 114.00408 * 180.02562 * 19 18 17 41 41 H 1.48502 * 110.00028 * 178.68140 * 20 18 17 42 42 H 1.48501 * 110.00166 * 299.99966 * 20 18 17 43 43 H 1.08009 * 122.53663 * 180.02562 * 21 17 16 44 44 H 1.08002 * 125.20736 * 179.97438 * 22 21 17 45 45 H 1.08999 * 109.47039 * 60.00721 * 24 10 9 46 46 H 1.09002 * 109.46972 * 180.02562 * 24 10 9 47 47 H 1.08997 * 109.47450 * 299.99909 * 25 6 5 48 48 H 1.09000 * 109.47091 * 60.00777 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9587 -0.6926 1.1994 5 6 1.9586 -0.6924 -1.1996 6 6 1.5754 0.1107 -2.4441 7 1 0.4999 0.2879 -2.4453 8 6 2.3131 1.4511 -2.4333 9 6 1.9303 2.2539 -3.6783 10 6 2.3195 1.4677 -4.9317 11 1 2.0464 2.0394 -5.8186 12 7 3.7650 1.2295 -4.9296 13 16 4.6061 1.2278 -6.3561 14 8 3.8810 0.3927 -7.2483 15 8 5.9685 1.0066 -6.0184 16 6 4.5157 2.8588 -7.0169 17 6 5.4483 3.4326 -7.7786 18 6 6.7218 2.7280 -8.1696 19 8 6.4388 1.7584 -9.1804 20 14 7.9430 3.9719 -8.8269 21 6 5.1578 4.7243 -8.1824 22 6 3.9897 5.1997 -7.7483 23 16 3.1787 3.9764 -6.7791 24 6 1.5819 0.1273 -4.9425 25 6 1.9642 -0.6753 -3.6979 26 1 -0.3634 0.4135 0.9408 27 1 -0.3634 0.6079 -0.8285 28 1 -0.3634 -1.0216 -0.1122 29 1 3.0486 -0.6922 1.1996 30 1 1.5953 -0.1788 2.0894 31 1 1.5953 -1.7202 1.1993 32 1 1.5102 -1.6844 -1.2549 33 1 3.0433 -0.7863 -1.1475 34 1 3.3886 1.2740 -2.4321 35 1 2.0361 2.0110 -1.5401 36 1 2.4556 3.2090 -3.6703 37 1 0.8548 2.4311 -3.6798 38 1 4.2296 1.0730 -4.0926 39 1 7.1444 2.2302 -7.2968 40 1 7.2144 1.2651 -9.4805 41 1 9.2146 3.2943 -9.1863 42 1 7.3788 4.6576 -10.0172 43 1 5.8265 5.3034 -8.8022 44 1 3.5995 6.1837 -7.9627 45 1 0.5064 0.3045 -4.9442 46 1 1.8595 -0.4330 -5.8353 47 1 3.0397 -0.8525 -3.6968 48 1 1.4386 -1.6302 -3.7056 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_17509452_13652106.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:30 Heat of formation + Delta-G solvation = 61.610435 kcal Electronic energy + Delta-G solvation = -30240.276438 eV Core-core repulsion = 26249.145810 eV Total energy + Delta-G solvation = -3991.130627 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.129 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -44.57279 -41.57491 -40.71121 -39.03649 -38.02624 -37.69575 -36.82735 -33.54136 -33.11863 -32.29676 -31.93560 -29.86483 -28.81217 -27.81198 -25.36749 -24.94693 -24.52766 -22.81817 -22.30328 -21.73729 -20.67497 -20.50839 -20.02505 -19.70119 -19.34062 -19.28172 -18.43765 -18.05398 -17.80016 -17.26873 -17.01926 -16.92273 -16.69942 -16.50803 -16.44719 -16.27667 -15.96898 -15.90118 -15.68412 -15.40854 -15.21582 -15.06513 -14.94010 -14.92182 -14.82656 -14.72926 -14.39496 -14.01798 -13.91869 -13.86962 -13.79992 -13.51830 -13.45445 -13.30257 -13.15092 -13.04065 -12.79997 -12.29090 -11.87208 -11.27553 -11.15554 -10.46501 -5.66948 -1.64453 -1.47852 -1.42422 -0.59811 -0.25428 0.46353 0.46843 0.51449 0.52886 0.68967 0.92858 0.96136 1.27947 1.32773 1.41648 1.64732 1.67408 1.74450 1.79713 1.82283 1.96118 2.13654 2.16538 2.22551 2.28576 2.29649 2.41103 2.45892 2.56249 2.57211 2.64854 2.72379 2.81123 2.93935 3.03199 3.09234 3.15069 3.21271 3.34397 3.36011 3.43468 3.55680 3.63022 3.65323 3.86116 3.93022 3.98618 4.15493 4.27015 4.68394 5.66631 Molecular weight = 362.13amu Principal moments of inertia in cm(-1) A = 0.018892 B = 0.003082 C = 0.002946 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1481.721075 B = 9082.612287 C = 9501.581740 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.052 4.052 2 N -0.389 5.389 3 H 0.424 0.576 4 C -0.048 4.048 5 C -0.010 4.010 6 C -0.118 4.118 7 H 0.099 0.901 8 C -0.131 4.131 9 C -0.127 4.127 10 C 0.149 3.851 11 H 0.088 0.912 12 N -1.114 6.114 13 S 2.721 3.279 14 O -0.933 6.933 15 O -0.945 6.945 16 C -0.776 4.776 17 C 0.066 3.934 18 C -0.113 4.113 19 O -0.533 6.533 20 Si 0.701 3.299 21 C -0.160 4.160 22 C -0.153 4.153 23 S 0.186 5.814 24 C -0.141 4.141 25 C -0.111 4.111 26 H 0.124 0.876 27 H 0.124 0.876 28 H 0.123 0.877 29 H 0.123 0.877 30 H 0.124 0.876 31 H 0.123 0.877 32 H 0.133 0.867 33 H 0.132 0.868 34 H 0.080 0.920 35 H 0.064 0.936 36 H 0.087 0.913 37 H 0.087 0.913 38 H 0.417 0.583 39 H 0.111 0.889 40 H 0.391 0.609 41 H -0.251 1.251 42 H -0.249 1.249 43 H 0.160 0.840 44 H 0.182 0.818 45 H 0.084 0.916 46 H 0.093 0.907 47 H 0.076 0.924 48 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.244 -4.310 28.221 31.063 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.194 4.194 2 N 0.035 4.965 3 H 0.261 0.739 4 C -0.190 4.190 5 C -0.131 4.131 6 C -0.136 4.136 7 H 0.117 0.883 8 C -0.169 4.169 9 C -0.165 4.165 10 C 0.041 3.959 11 H 0.106 0.894 12 N -0.876 5.876 13 S 2.806 3.194 14 O -0.923 6.923 15 O -0.936 6.936 16 C -0.976 4.976 17 C 0.049 3.951 18 C -0.224 4.224 19 O -0.342 6.342 20 Si 0.600 3.400 21 C -0.189 4.189 22 C -0.290 4.290 23 S 0.452 5.548 24 C -0.180 4.180 25 C -0.149 4.149 26 H 0.143 0.857 27 H 0.142 0.858 28 H 0.142 0.858 29 H 0.142 0.858 30 H 0.143 0.857 31 H 0.141 0.859 32 H 0.151 0.849 33 H 0.150 0.850 34 H 0.099 0.901 35 H 0.083 0.917 36 H 0.105 0.895 37 H 0.106 0.894 38 H 0.253 0.747 39 H 0.129 0.871 40 H 0.240 0.760 41 H -0.175 1.175 42 H -0.173 1.173 43 H 0.177 0.823 44 H 0.199 0.801 45 H 0.102 0.898 46 H 0.112 0.888 47 H 0.095 0.905 48 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -13.538 -4.787 27.852 31.336 hybrid contribution 1.468 0.109 -1.036 1.800 sum -12.071 -4.678 26.816 29.777 Atomic orbital electron populations 1.24187 0.75941 1.09783 1.09511 1.45124 1.16444 1.19153 1.15800 0.73947 1.24150 1.05706 1.02541 0.86591 1.24214 1.05460 0.99990 0.83474 1.21863 1.02655 0.95751 0.93379 0.88259 1.21806 1.01520 0.94445 0.99088 1.21829 1.03198 0.99079 0.92434 1.20887 0.79041 0.96496 0.99456 0.89378 1.55843 1.16911 1.88988 1.25823 1.01421 0.73118 0.72510 0.72388 1.93651 1.73295 1.62300 1.63017 1.93581 1.32587 1.84181 1.83203 1.35487 1.08089 1.29569 1.24485 1.17976 0.93108 0.92969 0.91032 1.25156 1.00414 0.99913 0.96901 1.86559 1.38021 1.52559 1.57043 0.94869 0.76866 0.82581 0.85708 1.20386 0.98855 0.95577 1.04097 1.26175 0.98058 1.03777 1.00982 1.83678 1.17606 1.03702 1.49854 1.22079 1.00944 0.95748 0.99231 1.21471 1.02981 0.98570 0.91888 0.85720 0.85777 0.85825 0.85814 0.85719 0.85888 0.84910 0.85003 0.90102 0.91737 0.89477 0.89414 0.74658 0.87135 0.75975 1.17491 1.17308 0.82324 0.80071 0.89792 0.88828 0.90495 0.90176 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 25. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.66 8.87 60.06 0.53 2.19 16 2 N -0.39 12.72 0.66 -251.26 -0.17 12.56 16 3 H 0.42 -14.41 6.61 -39.29 -0.26 -14.67 16 4 C -0.05 1.53 9.17 60.06 0.55 2.08 16 5 C -0.01 0.30 4.11 -3.83 -0.02 0.28 16 6 C -0.12 3.12 2.09 -90.62 -0.19 2.93 16 7 H 0.10 -2.73 6.33 -51.93 -0.33 -3.06 16 8 C -0.13 3.29 4.79 -26.72 -0.13 3.16 16 9 C -0.13 2.65 5.63 -26.73 -0.15 2.50 16 10 C 0.15 -2.53 2.54 -67.93 -0.17 -2.70 16 11 H 0.09 -1.35 5.61 -51.93 -0.29 -1.64 16 12 N -1.11 17.13 4.74 -4.89 -0.02 17.10 16 13 S 2.72 -24.26 5.49 -107.50 -0.59 -24.85 16 14 O -0.93 4.84 17.28 -57.17 -0.99 3.85 16 15 O -0.95 6.40 15.53 -57.17 -0.89 5.51 16 16 C -0.78 6.41 6.48 29.04 0.19 6.59 16 17 C 0.07 -0.46 5.17 -106.25 -0.55 -1.01 16 18 C -0.11 0.75 2.19 36.01 0.08 0.83 16 19 O -0.53 2.74 12.86 -35.23 -0.45 2.29 16 20 Si 0.70 -5.63 30.42 -169.99 -5.17 -10.80 16 21 C -0.16 1.33 8.74 -41.21 -0.36 0.97 16 22 C -0.15 1.54 11.23 29.04 0.33 1.87 16 23 S 0.19 -2.07 20.65 -107.50 -2.22 -4.29 16 24 C -0.14 2.47 5.63 -26.75 -0.15 2.32 16 25 C -0.11 2.38 5.04 -26.75 -0.13 2.25 16 26 H 0.12 -3.95 8.06 -51.93 -0.42 -4.37 16 27 H 0.12 -3.89 6.52 -51.93 -0.34 -4.23 16 28 H 0.12 -3.86 7.98 -51.93 -0.41 -4.27 16 29 H 0.12 -3.91 8.10 -51.93 -0.42 -4.33 16 30 H 0.12 -3.96 8.10 -51.93 -0.42 -4.38 16 31 H 0.12 -3.85 8.14 -51.93 -0.42 -4.27 16 32 H 0.13 -4.03 7.99 -51.93 -0.41 -4.44 16 33 H 0.13 -4.01 8.07 -51.93 -0.42 -4.43 16 34 H 0.08 -2.00 6.50 -51.93 -0.34 -2.34 16 35 H 0.06 -1.80 6.62 -51.93 -0.34 -2.15 16 36 H 0.09 -1.73 8.14 -51.93 -0.42 -2.16 16 37 H 0.09 -1.90 8.14 -51.93 -0.42 -2.32 16 38 H 0.42 -7.70 6.81 -34.47 -0.23 -7.94 16 39 H 0.11 -0.81 5.80 -51.93 -0.30 -1.11 16 40 H 0.39 -3.53 8.74 45.56 0.40 -3.13 16 41 H -0.25 1.46 7.11 56.52 0.40 1.86 16 42 H -0.25 1.39 6.86 56.52 0.39 1.78 16 43 H 0.16 -1.50 5.57 -52.48 -0.29 -1.79 16 44 H 0.18 -2.30 8.06 -52.49 -0.42 -2.72 16 45 H 0.08 -1.57 8.14 -51.93 -0.42 -1.99 16 46 H 0.09 -1.29 7.64 -51.93 -0.40 -1.69 16 47 H 0.08 -1.59 7.44 -51.93 -0.39 -1.98 16 48 H 0.08 -1.71 8.14 -51.93 -0.42 -2.14 16 LS Contribution 380.55 15.07 5.73 5.73 Total: 1.00 -40.23 380.55 -12.31 -52.53 By element: Atomic # 1 Polarization: -76.53 SS G_CDS: -7.37 Total: -83.90 kcal Atomic # 6 Polarization: 24.44 SS G_CDS: -0.17 Total: 24.26 kcal Atomic # 7 Polarization: 29.85 SS G_CDS: -0.19 Total: 29.66 kcal Atomic # 8 Polarization: 13.98 SS G_CDS: -2.33 Total: 11.65 kcal Atomic # 14 Polarization: -5.63 SS G_CDS: -5.17 Total: -10.80 kcal Atomic # 16 Polarization: -26.34 SS G_CDS: -2.81 Total: -29.15 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -40.23 -12.31 -52.53 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_17509452_13652106.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 114.145 kcal (2) G-P(sol) polarization free energy of solvation -40.229 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.916 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.306 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -52.534 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.610 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds