Wall clock time and date at job start Tue Mar 9 2021 13:53:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45203 * 109.47397 * 2 1 4 4 C 1.34224 * 117.00119 * 179.97438 * 3 2 1 5 5 O 1.20829 * 120.00273 * 0.02562 * 4 3 2 6 6 C 1.50701 * 119.99984 * 179.97438 * 4 3 2 7 7 H 1.08999 * 112.84858 * 48.80875 * 6 4 3 8 8 C 1.53784 * 113.61400 * 180.02562 * 6 4 3 9 9 C 1.53786 * 87.07915 * 139.98193 * 8 6 4 10 10 F 1.39900 * 113.61531 * 89.19955 * 9 8 6 11 11 C 1.52998 * 113.61517 * 220.01736 * 9 8 6 12 12 S 1.81392 * 109.47399 * 180.02562 * 11 9 8 13 13 O 1.42102 * 110.54544 * 68.37319 * 12 11 9 14 14 O 1.42101 * 110.54554 * 291.62690 * 12 11 9 15 15 O 1.52195 * 104.45213 * 180.02562 * 12 11 9 16 16 C 1.35898 * 114.00139 * 75.00079 * 15 12 11 17 17 C 1.38738 * 120.05510 * 270.27750 * 16 15 12 18 18 C 1.38141 * 119.94395 * 180.29870 * 17 16 15 19 19 C 1.38274 * 120.05552 * 359.44290 * 18 17 16 20 20 C 1.50696 * 119.94301 * 180.27916 * 19 18 17 21 21 O 1.42901 * 109.47185 * 65.00307 * 20 19 18 22 22 Si 1.86301 * 109.46880 * 185.00271 * 20 19 18 23 23 C 1.38260 * 120.11026 * 0.25933 * 19 18 17 24 24 C 1.38149 * 120.05668 * 0.02562 * 23 19 18 25 25 C 1.53775 * 87.08246 * 334.56824 * 9 8 6 26 26 H 1.08996 * 109.46840 * 300.00130 * 1 2 3 27 27 H 1.08998 * 109.46613 * 60.00053 * 1 2 3 28 28 H 1.09001 * 109.47001 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.47219 * 240.00096 * 2 1 3 30 30 H 1.09011 * 109.47261 * 119.99995 * 2 1 3 31 31 H 1.08996 * 113.61369 * 25.43919 * 8 6 4 32 32 H 1.08999 * 113.61326 * 254.52566 * 8 6 4 33 33 H 1.09004 * 109.47059 * 60.00006 * 11 9 8 34 34 H 1.09010 * 109.47124 * 300.00521 * 11 9 8 35 35 H 1.07998 * 120.02566 * 0.03783 * 17 16 15 36 36 H 1.08002 * 119.97550 * 179.72852 * 18 17 16 37 37 H 1.08998 * 109.47404 * 304.99778 * 20 19 18 38 38 H 0.96702 * 114.00258 * 60.00153 * 21 20 19 39 39 H 1.48500 * 109.99835 * 180.02562 * 22 20 19 40 40 H 1.48503 * 109.99893 * 301.31796 * 22 20 19 41 41 H 1.07997 * 119.97485 * 180.02562 * 23 19 18 42 42 H 1.07997 * 120.02837 * 180.02562 * 24 23 19 43 43 H 1.08997 * 113.61703 * 139.98343 * 25 9 8 44 44 H 1.09004 * 113.61592 * 270.88375 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3690 0.0000 4 6 3.3448 1.5448 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9374 0.0000 7 1 3.4709 3.5818 0.7553 8 6 5.4583 2.9680 0.0001 9 6 5.3566 4.1420 -0.9880 10 9 5.2852 5.3932 -0.3663 11 6 6.3988 4.0933 -2.1071 12 16 6.1785 5.5232 -3.2013 13 8 6.5241 6.7252 -2.5269 14 8 4.9609 5.4138 -3.9257 15 8 7.2601 5.3617 -4.2598 16 6 6.9940 4.3972 -5.1794 17 6 7.4073 3.0917 -4.9566 18 6 7.1410 2.1143 -5.8958 19 6 6.4530 2.4339 -7.0519 20 6 6.1583 1.3644 -8.0718 21 8 5.2713 0.3975 -7.5056 22 14 5.3617 2.1363 -9.5686 23 6 6.0346 3.7329 -7.2734 24 6 6.3036 4.7152 -6.3399 25 6 3.9865 3.5764 -1.3973 26 1 -0.3633 0.5138 0.8900 27 1 -0.3632 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 1.8934 -0.5138 -0.8900 30 1 1.8934 -0.5139 0.8901 31 1 5.9128 2.0748 -0.4285 32 1 5.8895 3.2435 0.9625 33 1 6.2742 3.1743 -2.6799 34 1 7.3988 4.1185 -1.6737 35 1 7.9405 2.8406 -4.0516 36 1 7.4663 1.0987 -5.7249 37 1 7.0877 0.8767 -8.3658 38 1 4.4221 0.7620 -7.2208 39 1 5.0655 1.0919 -10.5818 40 1 4.1098 2.8318 -9.1758 41 1 5.4970 3.9800 -8.1769 42 1 5.9762 5.7296 -6.5133 43 1 3.2294 4.3428 -1.5629 44 1 4.0386 2.8494 -2.2078 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_79476_16464788.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:53:19 Heat of formation + Delta-G solvation = -200.938267 kcal Electronic energy + Delta-G solvation = -33299.104023 eV Core-core repulsion = 28420.367528 eV Total energy + Delta-G solvation = -4878.736495 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.101 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -49.24086 -42.37557 -41.85073 -40.01864 -39.44183 -38.36318 -37.64713 -37.50371 -37.24435 -33.00170 -32.70236 -32.29109 -31.96521 -27.47525 -27.12242 -27.00804 -24.52763 -24.06609 -23.64959 -22.33252 -21.61133 -20.98011 -19.71074 -19.22240 -19.10731 -18.66262 -18.44230 -17.79903 -17.66722 -17.40744 -17.24280 -16.74881 -16.56931 -16.32353 -16.25145 -16.13512 -15.65529 -15.43799 -15.04232 -14.78508 -14.74700 -14.61461 -14.50759 -14.32750 -14.24548 -13.84749 -13.81774 -13.63519 -13.45109 -13.31789 -13.18393 -13.16455 -13.04071 -13.00799 -12.63902 -12.57589 -12.55175 -12.40990 -11.98504 -11.81022 -11.61010 -11.58670 -11.43477 -10.83705 -10.43313 -10.15006 -5.10095 -1.29148 -0.28757 -0.06387 0.85459 1.00845 1.09520 1.45793 1.48997 1.83612 2.12553 2.31211 2.48119 2.60366 2.67250 2.80304 3.02858 3.13178 3.14480 3.32521 3.37558 3.46384 3.51013 3.67164 3.81198 3.87228 3.89012 3.91668 3.92564 4.05229 4.14022 4.18170 4.21837 4.23411 4.31737 4.46582 4.53394 4.55104 4.64129 4.64724 4.74167 4.80107 4.85827 4.89562 4.95965 5.05009 5.35606 5.45587 6.20022 6.61458 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.060 3.940 3 O -0.353 6.353 4 C 0.475 3.525 5 O -0.503 6.503 6 C -0.110 4.110 7 H 0.138 0.862 8 C -0.121 4.121 9 C 0.103 3.897 10 F -0.170 7.170 11 C -0.674 4.674 12 S 2.595 3.405 13 O -0.906 6.906 14 O -0.938 6.938 15 O -0.659 6.659 16 C 0.066 3.934 17 C -0.132 4.132 18 C -0.074 4.074 19 C -0.099 4.099 20 C -0.078 4.078 21 O -0.526 6.526 22 Si 0.685 3.315 23 C -0.100 4.100 24 C -0.080 4.080 25 C -0.143 4.143 26 H 0.068 0.932 27 H 0.068 0.932 28 H 0.082 0.918 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.121 0.879 32 H 0.102 0.898 33 H 0.155 0.845 34 H 0.158 0.842 35 H 0.144 0.856 36 H 0.145 0.855 37 H 0.125 0.875 38 H 0.378 0.622 39 H -0.253 1.253 40 H -0.256 1.256 41 H 0.144 0.856 42 H 0.147 0.853 43 H 0.110 0.890 44 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.088 -3.140 -2.384 3.944 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.270 6.270 4 C 0.318 3.682 5 O -0.390 6.390 6 C -0.129 4.129 7 H 0.156 0.844 8 C -0.159 4.159 9 C 0.083 3.917 10 F -0.150 7.150 11 C -0.799 4.799 12 S 2.688 3.312 13 O -0.904 6.904 14 O -0.936 6.936 15 O -0.618 6.618 16 C 0.024 3.976 17 C -0.152 4.152 18 C -0.092 4.092 19 C -0.100 4.100 20 C -0.188 4.188 21 O -0.333 6.333 22 Si 0.585 3.415 23 C -0.117 4.117 24 C -0.100 4.100 25 C -0.180 4.180 26 H 0.087 0.913 27 H 0.087 0.913 28 H 0.101 0.899 29 H 0.090 0.910 30 H 0.090 0.910 31 H 0.139 0.861 32 H 0.121 0.879 33 H 0.173 0.827 34 H 0.176 0.824 35 H 0.162 0.838 36 H 0.162 0.838 37 H 0.143 0.857 38 H 0.226 0.774 39 H -0.178 1.178 40 H -0.180 1.180 41 H 0.161 0.839 42 H 0.165 0.835 43 H 0.129 0.871 44 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -0.183 -3.065 -3.249 4.470 hybrid contribution -0.397 -0.849 1.571 1.829 sum -0.580 -3.914 -1.678 4.298 Atomic orbital electron populations 1.21829 0.92192 1.03340 1.03778 1.23129 0.95741 0.79597 1.02829 1.86521 1.24016 1.32976 1.83485 1.23214 0.80897 0.91813 0.72300 1.90691 1.60540 1.42721 1.45051 1.22486 0.97208 0.92110 1.01058 0.84380 1.23589 0.93771 0.97725 1.00842 1.21162 0.95414 0.82186 0.92915 1.93020 1.97012 1.41424 1.83568 1.31364 1.09625 1.25016 1.13858 1.05619 0.73864 0.76438 0.75233 1.93696 1.82179 1.40124 1.74373 1.93669 1.45829 1.86791 1.67356 1.85785 1.67566 1.59577 1.48868 1.18136 1.03435 0.85361 0.90641 1.21442 1.00860 0.90954 1.01988 1.20951 0.96500 0.99577 0.92135 1.20585 0.97866 0.94899 0.96684 1.25094 0.99194 0.92773 1.01715 1.86631 1.29823 1.35433 1.81391 0.94940 0.84805 0.83482 0.78233 1.21062 0.99485 0.91941 0.99228 1.21304 0.95475 1.01496 0.91764 1.23767 0.96064 1.01776 0.96438 0.91283 0.91285 0.89924 0.91011 0.90967 0.86068 0.87948 0.82673 0.82436 0.83828 0.83765 0.85728 0.77393 1.17793 1.18029 0.83863 0.83480 0.87144 0.86698 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.30 10.29 37.16 0.38 0.68 16 2 C 0.06 -0.02 6.19 37.16 0.23 0.21 16 3 O -0.35 -0.39 10.22 -39.24 -0.40 -0.79 16 4 C 0.48 0.54 7.48 36.01 0.27 0.81 16 5 O -0.50 -1.75 15.65 -18.75 -0.29 -2.04 16 6 C -0.11 0.12 4.24 -90.96 -0.39 -0.27 16 7 H 0.14 -0.33 8.14 -51.93 -0.42 -0.76 16 8 C -0.12 0.20 6.86 -25.91 -0.18 0.02 16 9 C 0.10 -0.08 1.62 -89.81 -0.15 -0.22 16 10 F -0.17 -0.30 16.28 2.25 0.04 -0.27 16 11 C -0.67 1.47 5.16 37.16 0.19 1.66 16 12 S 2.60 4.09 4.89 -107.50 -0.53 3.57 16 13 O -0.91 -4.98 17.54 -67.03 -1.18 -6.15 16 14 O -0.94 -2.64 16.26 -67.04 -1.09 -3.73 16 15 O -0.66 -0.71 10.05 -51.74 -0.52 -1.23 16 16 C 0.07 0.00 4.80 -39.21 -0.19 -0.19 16 17 C -0.13 0.28 8.46 -39.43 -0.33 -0.05 16 18 C -0.07 0.18 9.68 -39.60 -0.38 -0.21 16 19 C -0.10 0.21 5.35 -104.60 -0.56 -0.35 16 20 C -0.08 0.19 2.80 36.00 0.10 0.30 16 21 O -0.53 0.50 12.83 -35.23 -0.45 0.05 16 22 Si 0.68 -1.82 29.88 -169.99 -5.08 -6.90 16 23 C -0.10 0.19 8.66 -39.61 -0.34 -0.15 16 24 C -0.08 0.03 9.05 -39.43 -0.36 -0.33 16 25 C -0.14 0.20 7.08 -25.92 -0.18 0.01 16 26 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 28 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 29 H 0.07 -0.03 8.13 -51.93 -0.42 -0.45 16 30 H 0.07 -0.02 8.13 -51.92 -0.42 -0.44 16 31 H 0.12 -0.25 7.39 -51.93 -0.38 -0.64 16 32 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 33 H 0.16 -0.75 6.38 -51.92 -0.33 -1.08 16 34 H 0.16 -0.71 8.14 -51.92 -0.42 -1.13 16 35 H 0.14 -0.70 7.46 -52.49 -0.39 -1.09 16 36 H 0.14 -0.54 8.06 -52.49 -0.42 -0.96 16 37 H 0.12 -0.43 7.96 -51.93 -0.41 -0.85 16 38 H 0.38 -1.36 8.70 45.56 0.40 -0.96 16 39 H -0.25 -0.22 7.11 56.52 0.40 0.19 16 40 H -0.26 0.20 7.01 56.52 0.40 0.59 16 41 H 0.14 -0.54 4.83 -52.49 -0.25 -0.79 16 42 H 0.15 -0.18 8.06 -52.49 -0.42 -0.61 16 43 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 44 H 0.11 -0.30 7.91 -51.93 -0.41 -0.71 16 LS Contribution 385.44 15.07 5.81 5.81 Total: 0.00 -11.28 385.44 -11.22 -22.50 By element: Atomic # 1 Polarization: -7.11 SS G_CDS: -5.64 Total: -12.75 kcal Atomic # 6 Polarization: 3.83 SS G_CDS: -1.88 Total: 1.94 kcal Atomic # 8 Polarization: -9.97 SS G_CDS: -3.93 Total: -13.90 kcal Atomic # 9 Polarization: -0.30 SS G_CDS: 0.04 Total: -0.27 kcal Atomic # 14 Polarization: -1.82 SS G_CDS: -5.08 Total: -6.90 kcal Atomic # 16 Polarization: 4.09 SS G_CDS: -0.53 Total: 3.57 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -11.28 -11.22 -22.50 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_79476_16464788.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -178.443 kcal (2) G-P(sol) polarization free energy of solvation -11.280 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -189.723 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.215 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.495 kcal (6) G-S(sol) free energy of system = (1) + (5) -200.938 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds