Wall clock time and date at job start Tue Mar 9 2021 13:54:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.45199 * 109.47047 * 2 1 4 4 C 1.34227 * 116.99667 * 180.02562 * 3 2 1 5 5 O 1.20823 * 120.00612 * 359.97438 * 4 3 2 6 6 C 1.50710 * 119.99699 * 180.02562 * 4 3 2 7 7 H 1.08993 * 112.85162 * 48.80292 * 6 4 3 8 8 C 1.53785 * 113.61098 * 179.97438 * 6 4 3 9 9 C 1.53792 * 87.07968 * 89.20111 * 8 6 4 10 10 F 1.39897 * 113.60969 * 270.79842 * 9 8 6 11 11 C 1.52999 * 113.61269 * 139.97888 * 9 8 6 12 12 S 1.81400 * 109.46567 * 184.99783 * 11 9 8 13 13 O 1.42097 * 110.54381 * 68.38002 * 12 11 9 14 14 O 1.42098 * 110.54611 * 291.61929 * 12 11 9 15 15 O 1.52207 * 104.44576 * 180.02562 * 12 11 9 16 16 C 1.35900 * 113.99788 * 75.00118 * 15 12 11 17 17 C 1.38710 * 120.05354 * 90.00179 * 16 15 12 18 18 C 1.50699 * 120.03036 * 359.97438 * 17 16 15 19 19 O 1.42907 * 109.46603 * 74.72869 * 18 17 16 20 20 Si 1.86298 * 109.47032 * 194.72172 * 18 17 16 21 21 C 1.38169 * 119.93902 * 179.71939 * 17 16 15 22 22 C 1.38246 * 120.05897 * 0.27854 * 21 17 16 23 23 C 1.38278 * 120.10968 * 359.97336 * 22 21 17 24 24 C 1.38123 * 120.06082 * 359.97438 * 23 22 21 25 25 C 1.53780 * 113.68787 * 277.53093 * 6 4 3 26 26 H 1.09000 * 109.47204 * 300.00395 * 1 2 3 27 27 H 1.09001 * 109.47187 * 60.00237 * 1 2 3 28 28 H 1.08997 * 109.47288 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.47159 * 240.00160 * 2 1 3 30 30 H 1.08996 * 109.46949 * 120.00163 * 2 1 3 31 31 H 1.08995 * 113.61869 * 334.65389 * 8 6 4 32 32 H 1.08998 * 113.61385 * 203.74542 * 8 6 4 33 33 H 1.08997 * 109.46846 * 64.99983 * 11 9 8 34 34 H 1.08996 * 109.47097 * 304.99810 * 11 9 8 35 35 H 1.08996 * 109.47117 * 314.72782 * 18 17 16 36 36 H 0.96697 * 114.00527 * 59.99993 * 19 18 17 37 37 H 1.48506 * 109.99834 * 58.68765 * 20 18 17 38 38 H 1.48502 * 110.00011 * 180.02562 * 20 18 17 39 39 H 1.08006 * 119.97121 * 180.25142 * 21 17 16 40 40 H 1.07994 * 119.94104 * 179.97438 * 22 21 17 41 41 H 1.07999 * 119.97544 * 180.02562 * 23 22 21 42 42 H 1.07998 * 120.03505 * 180.02562 * 24 23 22 43 43 H 1.08995 * 113.61288 * 156.32739 * 25 6 4 44 44 H 1.09001 * 113.61513 * 25.42495 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0808 0.5866 -0.0005 6 6 3.9208 2.9374 0.0000 7 1 3.4716 3.5810 0.7564 8 6 5.4583 2.9680 -0.0001 9 6 5.3803 2.9457 -1.5359 10 9 5.3595 1.6559 -2.0771 11 6 6.4032 3.8587 -2.2148 12 16 6.1171 3.8602 -4.0061 13 8 4.8909 4.5085 -4.3147 14 8 6.4361 2.5924 -4.5631 15 8 7.1851 4.7924 -4.5604 16 6 8.4319 4.2522 -4.5845 17 6 8.8647 3.5534 -5.7018 18 6 7.9524 3.3918 -6.8904 19 8 7.8789 4.6268 -7.6057 20 14 8.6229 2.0637 -8.0117 21 6 10.1348 3.0101 -5.7261 22 6 10.9720 3.1575 -4.6359 23 6 10.5410 3.8493 -3.5188 24 6 9.2725 4.3952 -3.4899 25 6 3.9857 3.5797 -1.3957 26 1 -0.3633 0.5139 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 1.8934 -0.5138 -0.8900 30 1 1.8933 -0.5138 0.8899 31 1 5.9129 2.0742 0.4270 32 1 5.8767 3.8905 0.4024 33 1 7.4093 3.4941 -2.0078 34 1 6.2977 4.8726 -1.8291 35 1 6.9566 3.1101 -6.5484 36 1 8.7308 4.9389 -7.9402 37 1 8.7342 0.7816 -7.2705 38 1 7.7325 1.8950 -9.1882 39 1 10.4738 2.4693 -6.5974 40 1 11.9642 2.7318 -4.6567 41 1 11.1969 3.9635 -2.6685 42 1 8.9365 4.9358 -2.6174 43 1 4.0016 4.6694 -1.3746 44 1 3.2515 3.1796 -2.0951 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_79477_15494190.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:54:04 Heat of formation + Delta-G solvation = -194.980194 kcal Electronic energy + Delta-G solvation = -34069.249112 eV Core-core repulsion = 29190.770979 eV Total energy + Delta-G solvation = -4878.478133 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.101 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -49.07116 -42.47138 -41.77145 -39.50112 -39.35738 -38.33772 -37.72351 -37.37304 -37.21036 -33.10906 -32.79585 -32.06640 -31.57709 -27.43466 -27.07603 -26.76953 -24.79404 -23.98114 -23.18104 -22.63946 -21.65547 -20.71987 -19.74020 -19.05483 -18.94682 -18.57601 -18.16659 -17.78977 -17.54749 -17.27751 -17.12909 -16.82539 -16.67457 -16.44560 -16.04093 -15.78005 -15.61919 -15.19111 -15.13645 -14.70669 -14.64424 -14.47073 -14.31047 -14.18874 -14.01452 -13.86036 -13.63700 -13.46793 -13.41591 -13.30111 -13.25521 -13.18073 -12.97070 -12.92957 -12.62617 -12.54707 -12.47635 -12.08036 -11.92893 -11.79542 -11.50872 -11.46762 -11.42097 -10.47737 -10.33493 -10.11713 -5.05984 -1.25819 -0.15151 -0.11848 0.91421 1.12286 1.24393 1.52953 1.69342 2.04540 2.21165 2.31018 2.56047 2.62562 2.68927 2.93096 3.06731 3.15607 3.27081 3.40724 3.48161 3.55062 3.69666 3.72826 3.82111 3.93985 3.97189 3.97482 4.01039 4.01581 4.15762 4.20117 4.30766 4.36300 4.38218 4.45358 4.59380 4.61506 4.71443 4.73759 4.81733 4.84345 4.84619 4.97712 5.02776 5.07680 5.45621 5.51365 6.55751 6.73088 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.354 6.354 4 C 0.473 3.527 5 O -0.489 6.489 6 C -0.111 4.111 7 H 0.132 0.868 8 C -0.123 4.123 9 C 0.096 3.904 10 F -0.165 7.165 11 C -0.674 4.674 12 S 2.588 3.412 13 O -0.912 6.912 14 O -0.935 6.935 15 O -0.651 6.651 16 C 0.082 3.918 17 C -0.086 4.086 18 C -0.091 4.091 19 O -0.531 6.531 20 Si 0.694 3.306 21 C -0.098 4.098 22 C -0.092 4.092 23 C -0.096 4.096 24 C -0.132 4.132 25 C -0.148 4.148 26 H 0.068 0.932 27 H 0.068 0.932 28 H 0.082 0.918 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.106 0.894 32 H 0.121 0.879 33 H 0.152 0.848 34 H 0.161 0.839 35 H 0.123 0.877 36 H 0.378 0.622 37 H -0.247 1.247 38 H -0.248 1.248 39 H 0.146 0.854 40 H 0.144 0.856 41 H 0.144 0.856 42 H 0.143 0.857 43 H 0.130 0.870 44 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.905 2.851 3.761 7.559 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.271 6.271 4 C 0.315 3.685 5 O -0.375 6.375 6 C -0.131 4.131 7 H 0.150 0.850 8 C -0.161 4.161 9 C 0.076 3.924 10 F -0.145 7.145 11 C -0.798 4.798 12 S 2.682 3.318 13 O -0.910 6.910 14 O -0.934 6.934 15 O -0.610 6.610 16 C 0.041 3.959 17 C -0.089 4.089 18 C -0.201 4.201 19 O -0.336 6.336 20 Si 0.594 3.406 21 C -0.115 4.115 22 C -0.111 4.111 23 C -0.114 4.114 24 C -0.152 4.152 25 C -0.186 4.186 26 H 0.087 0.913 27 H 0.087 0.913 28 H 0.101 0.899 29 H 0.091 0.909 30 H 0.090 0.910 31 H 0.124 0.876 32 H 0.140 0.860 33 H 0.170 0.830 34 H 0.179 0.821 35 H 0.140 0.860 36 H 0.225 0.775 37 H -0.172 1.172 38 H -0.173 1.173 39 H 0.163 0.837 40 H 0.161 0.839 41 H 0.162 0.838 42 H 0.160 0.840 43 H 0.148 0.852 44 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 4.933 1.710 2.831 5.939 hybrid contribution -0.408 0.132 1.307 1.375 sum 4.525 1.842 4.137 6.402 Atomic orbital electron populations 1.21827 0.92195 1.03333 1.03717 1.23126 0.95665 0.79548 1.02922 1.86476 1.23817 1.33026 1.83792 1.22854 0.81076 0.91561 0.73029 1.90717 1.60383 1.42488 1.43873 1.21977 0.97561 0.92289 1.01236 0.85015 1.23556 0.93732 1.06342 0.92478 1.21442 0.95447 0.79484 0.96030 1.93047 1.97118 1.37758 1.86582 1.31356 1.09869 1.09700 1.28908 1.05823 0.74900 0.74071 0.77002 1.93675 1.41000 1.74570 1.81750 1.93651 1.82470 1.43995 1.73268 1.85768 1.28031 1.62201 1.84955 1.17888 0.81812 0.99764 0.96474 1.20571 0.96107 0.96467 0.95746 1.25458 1.03322 0.96454 0.94839 1.86600 1.35561 1.38389 1.73025 0.95508 0.87893 0.77443 0.79783 1.21041 0.92054 0.98893 0.99521 1.21438 1.00302 0.96869 0.92443 1.21157 0.94691 0.96485 0.99090 1.21429 0.95012 1.01035 0.97737 1.23863 0.95326 1.03306 0.96095 0.91328 0.91285 0.89917 0.90928 0.90971 0.87596 0.86032 0.83037 0.82059 0.85993 0.77461 1.17173 1.17291 0.83685 0.83866 0.83802 0.83960 0.85213 0.88030 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.13 10.29 37.16 0.38 0.51 16 2 C 0.06 0.08 6.19 37.16 0.23 0.31 16 3 O -0.35 -0.92 10.22 -39.25 -0.40 -1.32 16 4 C 0.47 1.41 6.93 36.01 0.25 1.66 16 5 O -0.49 -2.84 14.48 -18.75 -0.27 -3.11 16 6 C -0.11 0.07 4.45 -90.95 -0.40 -0.33 16 7 H 0.13 -0.47 8.14 -51.93 -0.42 -0.89 16 8 C -0.12 0.19 6.93 -25.91 -0.18 0.01 16 9 C 0.10 0.08 1.56 -89.77 -0.14 -0.06 16 10 F -0.17 -0.83 14.84 2.25 0.03 -0.79 16 11 C -0.67 0.84 5.11 37.16 0.19 1.03 16 12 S 2.59 9.15 4.69 -107.50 -0.50 8.65 16 13 O -0.91 -5.59 17.96 -67.03 -1.20 -6.79 16 14 O -0.94 -5.66 13.78 -67.04 -0.92 -6.58 16 15 O -0.65 -2.00 9.48 -51.75 -0.49 -2.49 16 16 C 0.08 0.15 4.78 -39.21 -0.19 -0.04 16 17 C -0.09 -0.14 4.67 -104.47 -0.49 -0.63 16 18 C -0.09 -0.27 2.23 36.01 0.08 -0.19 16 19 O -0.53 -1.33 12.88 -35.23 -0.45 -1.79 16 20 Si 0.69 0.41 29.92 -169.99 -5.09 -4.68 16 21 C -0.10 0.14 8.66 -39.60 -0.34 -0.20 16 22 C -0.09 0.27 10.04 -39.56 -0.40 -0.13 16 23 C -0.10 0.29 10.04 -39.61 -0.40 -0.11 16 24 C -0.13 0.20 8.46 -39.43 -0.33 -0.13 16 25 C -0.15 0.06 6.94 -25.89 -0.18 -0.12 16 26 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 27 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 28 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 29 H 0.07 0.12 8.13 -51.93 -0.42 -0.30 16 30 H 0.07 0.07 8.13 -51.93 -0.42 -0.35 16 31 H 0.11 -0.01 7.43 -51.93 -0.39 -0.39 16 32 H 0.12 -0.63 8.10 -51.93 -0.42 -1.05 16 33 H 0.15 -0.50 6.58 -51.93 -0.34 -0.84 16 34 H 0.16 -0.85 8.05 -51.93 -0.42 -1.27 16 35 H 0.12 0.68 5.43 -51.93 -0.28 0.40 16 36 H 0.38 -0.98 8.70 45.56 0.40 -0.59 16 37 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 38 H -0.25 -0.89 7.11 56.52 0.40 -0.49 16 39 H 0.15 -0.60 5.13 -52.48 -0.27 -0.87 16 40 H 0.14 -0.82 8.06 -52.49 -0.42 -1.24 16 41 H 0.14 -0.82 8.06 -52.49 -0.42 -1.25 16 42 H 0.14 -0.66 7.47 -52.49 -0.39 -1.05 16 43 H 0.13 -0.45 8.04 -51.93 -0.42 -0.87 16 44 H 0.10 0.08 8.10 -51.93 -0.42 -0.34 16 LS Contribution 377.73 15.07 5.69 5.69 Total: 0.00 -13.86 377.73 -11.06 -24.92 By element: Atomic # 1 Polarization: -7.76 SS G_CDS: -5.53 Total: -13.29 kcal Atomic # 6 Polarization: 3.50 SS G_CDS: -1.92 Total: 1.58 kcal Atomic # 8 Polarization: -18.34 SS G_CDS: -3.74 Total: -22.08 kcal Atomic # 9 Polarization: -0.83 SS G_CDS: 0.03 Total: -0.79 kcal Atomic # 14 Polarization: 0.41 SS G_CDS: -5.09 Total: -4.68 kcal Atomic # 16 Polarization: 9.15 SS G_CDS: -0.50 Total: 8.65 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -13.86 -11.06 -24.92 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_79477_15494190.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -170.058 kcal (2) G-P(sol) polarization free energy of solvation -13.865 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -183.923 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.058 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.922 kcal (6) G-S(sol) free energy of system = (1) + (5) -194.980 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds