Wall clock time and date at job start Tue Mar 9 2021 13:44:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 O 1.45195 * 109.47124 * 2 1 4 4 C 1.34232 * 116.99927 * 180.02562 * 3 2 1 5 5 O 1.20820 * 119.99791 * 359.97438 * 4 3 2 6 6 C 1.50701 * 119.99882 * 179.97438 * 4 3 2 7 7 H 1.09002 * 112.85178 * 309.66385 * 6 4 3 8 8 C 1.53785 * 113.69000 * 80.93543 * 6 4 3 9 9 C 1.53777 * 87.08241 * 89.12299 * 8 6 4 10 10 F 1.39895 * 113.61770 * 270.88672 * 9 8 6 11 11 C 1.52998 * 113.68937 * 139.98701 * 9 8 6 12 12 S 1.81398 * 109.46738 * 82.46796 * 11 9 8 13 13 O 1.42101 * 110.54518 * 291.62117 * 12 11 9 14 14 O 1.42100 * 110.54420 * 68.37349 * 12 11 9 15 15 O 1.52200 * 104.45332 * 179.97438 * 12 11 9 16 16 C 1.36013 * 113.99957 * 74.99815 * 15 12 11 17 17 C 1.39150 * 120.06328 * 90.00396 * 16 15 12 18 18 O 1.35992 * 120.06595 * 0.02562 * 17 16 15 19 19 C 1.42900 * 116.99696 * 180.02562 * 18 17 16 20 20 C 1.38561 * 119.86236 * 179.97438 * 17 16 15 21 21 C 1.38313 * 119.99410 * 359.97438 * 20 17 16 22 22 Br 1.89099 * 119.93960 * 180.02562 * 21 20 17 23 23 C 1.38339 * 120.12310 * 359.97438 * 21 20 17 24 24 C 1.50707 * 119.92802 * 180.02562 * 23 21 20 25 25 O 1.42903 * 109.46551 * 194.99966 * 24 23 21 26 26 Si 1.86301 * 109.47105 * 314.99590 * 24 23 21 27 27 C 1.38242 * 120.13767 * 359.78585 * 23 21 20 28 28 C 1.53781 * 113.61206 * 178.47078 * 6 4 3 29 29 H 1.08998 * 109.47094 * 180.02562 * 1 2 3 30 30 H 1.09007 * 109.46887 * 300.00022 * 1 2 3 31 31 H 1.08993 * 109.46867 * 59.99942 * 1 2 3 32 32 H 1.09001 * 109.46715 * 239.99284 * 2 1 3 33 33 H 1.09003 * 109.46911 * 120.00138 * 2 1 3 34 34 H 1.08999 * 113.61060 * 203.67722 * 8 6 4 35 35 H 1.08997 * 113.61198 * 334.57515 * 8 6 4 36 36 H 1.08995 * 109.47568 * 202.46290 * 11 9 8 37 37 H 1.08996 * 109.47622 * 322.47327 * 11 9 8 38 38 H 1.09002 * 109.47097 * 299.99600 * 19 18 17 39 39 H 1.08998 * 109.47628 * 59.99460 * 19 18 17 40 40 H 1.09004 * 109.47131 * 179.97438 * 19 18 17 41 41 H 1.08004 * 120.00067 * 180.02562 * 20 17 16 42 42 H 1.08998 * 109.47065 * 75.00140 * 24 23 21 43 43 H 0.96694 * 114.00156 * 60.00090 * 25 24 23 44 44 H 1.48499 * 109.99902 * 180.02562 * 26 24 23 45 45 H 1.48501 * 110.00037 * 301.32226 * 26 24 23 46 46 H 1.07994 * 119.99239 * 180.25684 * 27 23 21 47 47 H 1.09000 * 113.61578 * 25.34539 * 28 6 4 48 48 H 1.09001 * 113.61682 * 156.17118 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0807 0.5866 -0.0005 6 6 3.9208 2.9374 -0.0012 7 1 3.4899 3.5733 -0.7744 8 6 3.9524 3.5935 1.3893 9 6 5.3426 2.9613 1.5695 10 9 5.3068 1.6770 2.1229 11 6 6.3503 3.8796 2.2638 12 16 6.1162 3.7854 4.0602 13 8 4.8762 4.3709 4.4329 14 8 6.4977 2.5058 4.5463 15 8 7.1644 4.7305 4.6299 16 6 6.8591 6.0479 4.4841 17 6 6.1370 6.7096 5.4726 18 8 5.7356 6.0406 6.5864 19 6 4.9977 6.7836 7.5588 20 6 5.8287 8.0519 5.3200 21 6 6.2390 8.7312 4.1872 22 35 5.8181 10.5631 3.9810 23 6 6.9578 8.0732 3.2053 24 6 7.4033 8.8178 1.9731 25 8 7.8053 7.8821 0.9706 26 14 5.9936 9.8513 1.3285 27 6 7.2726 6.7353 3.3544 28 6 5.4579 2.9682 0.0359 29 1 -0.3633 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8901 31 1 -0.3633 0.5138 -0.8899 32 1 1.8933 -0.5140 -0.8899 33 1 1.8934 -0.5139 0.8900 34 1 3.9689 4.6829 1.3577 35 1 3.2018 3.2003 2.0748 36 1 7.3628 3.5641 2.0124 37 1 6.1962 4.9060 1.9308 38 1 5.6049 7.6141 7.9189 39 1 4.0854 7.1706 7.1049 40 1 4.7396 6.1327 8.3942 41 1 5.2686 8.5678 6.0860 42 1 8.2436 9.4652 2.2237 43 1 7.1058 7.2726 0.6984 44 1 6.4200 10.5901 0.1129 45 1 4.8305 8.9836 1.0131 46 1 7.8374 6.2250 2.5883 47 1 5.9225 2.0701 -0.3711 48 1 5.8860 3.8861 -0.3670 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_40_79904_15494190.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:44:33 Heat of formation + Delta-G solvation = -234.065108 kcal Electronic energy + Delta-G solvation = -41473.624491 eV Core-core repulsion = 35779.413695 eV Total energy + Delta-G solvation = -5694.210796 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 483.027 amu Computer time = 2.79 seconds Orbital eigenvalues (eV) -49.09794 -42.80231 -41.77169 -40.50695 -39.73817 -39.36450 -38.30504 -37.59382 -37.37498 -37.18002 -34.01855 -32.86413 -32.44420 -32.02237 -30.95770 -29.03782 -27.43377 -26.84486 -26.57082 -24.86356 -24.00552 -23.39551 -22.65673 -21.68689 -20.73624 -19.94050 -19.30028 -19.22214 -18.84833 -18.70941 -18.24942 -17.89151 -17.73623 -17.44823 -17.15292 -17.00954 -16.85610 -16.57442 -16.38625 -16.28436 -16.03387 -15.69606 -15.55696 -15.18498 -15.02628 -14.71005 -14.63713 -14.51031 -14.32245 -14.14068 -14.06123 -13.87297 -13.75798 -13.63275 -13.35297 -13.25547 -13.24416 -13.20519 -12.99661 -12.96841 -12.92129 -12.81003 -12.61665 -12.54162 -12.49358 -12.47036 -12.30383 -11.85658 -11.80772 -11.50868 -11.48504 -11.42225 -10.92900 -10.50997 -9.58748 -4.72375 -1.36385 -0.61131 -0.40667 -0.23934 0.80337 1.06203 1.12747 1.49204 1.52768 1.71786 1.76688 1.94979 2.33805 2.52702 2.64145 2.71393 2.82210 2.89339 3.05563 3.07389 3.11925 3.19983 3.30613 3.46785 3.58467 3.73236 3.81606 3.91470 3.93527 3.97234 4.00714 4.01136 4.03970 4.14583 4.17188 4.17395 4.29509 4.31118 4.34669 4.39564 4.43252 4.44121 4.57581 4.60425 4.71547 4.81583 4.83641 4.90051 5.02360 5.45827 5.80577 6.09462 6.73300 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.061 3.939 3 O -0.355 6.355 4 C 0.473 3.527 5 O -0.488 6.488 6 C -0.112 4.112 7 H 0.131 0.869 8 C -0.145 4.145 9 C 0.097 3.903 10 F -0.166 7.166 11 C -0.677 4.677 12 S 2.590 3.410 13 O -0.931 6.931 14 O -0.902 6.902 15 O -0.647 6.647 16 C 0.053 3.947 17 C 0.170 3.830 18 O -0.291 6.291 19 C 0.017 3.983 20 C -0.156 4.156 21 C -0.043 4.043 22 Br 0.086 6.914 23 C -0.103 4.103 24 C -0.059 4.059 25 O -0.529 6.529 26 Si 0.539 3.461 27 C -0.081 4.081 28 C -0.124 4.124 29 H 0.082 0.918 30 H 0.068 0.932 31 H 0.067 0.933 32 H 0.072 0.928 33 H 0.073 0.927 34 H 0.126 0.874 35 H 0.102 0.898 36 H 0.158 0.842 37 H 0.152 0.848 38 H 0.065 0.935 39 H 0.068 0.932 40 H 0.113 0.887 41 H 0.163 0.837 42 H 0.134 0.866 43 H 0.374 0.626 44 H -0.225 1.225 45 H -0.240 1.240 46 H 0.165 0.835 47 H 0.107 0.893 48 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.151 8.220 0.093 8.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.013 4.013 3 O -0.272 6.272 4 C 0.315 3.685 5 O -0.374 6.374 6 C -0.131 4.131 7 H 0.149 0.851 8 C -0.182 4.182 9 C 0.078 3.922 10 F -0.146 7.146 11 C -0.802 4.802 12 S 2.682 3.318 13 O -0.930 6.930 14 O -0.900 6.900 15 O -0.605 6.605 16 C 0.010 3.990 17 C 0.119 3.881 18 O -0.202 6.202 19 C -0.077 4.077 20 C -0.176 4.176 21 C -0.124 4.124 22 Br 0.172 6.828 23 C -0.105 4.105 24 C -0.169 4.169 25 O -0.334 6.334 26 Si 0.434 3.566 27 C -0.102 4.102 28 C -0.162 4.162 29 H 0.101 0.899 30 H 0.087 0.913 31 H 0.086 0.914 32 H 0.090 0.910 33 H 0.091 0.909 34 H 0.144 0.856 35 H 0.121 0.879 36 H 0.177 0.823 37 H 0.170 0.830 38 H 0.084 0.916 39 H 0.086 0.914 40 H 0.131 0.869 41 H 0.180 0.820 42 H 0.151 0.849 43 H 0.221 0.779 44 H -0.148 1.148 45 H -0.163 1.163 46 H 0.182 0.818 47 H 0.125 0.875 48 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -3.139 8.505 0.201 9.068 hybrid contribution 0.440 -1.715 -0.926 1.998 sum -2.699 6.791 -0.724 7.343 Atomic orbital electron populations 1.21826 0.92213 1.03337 1.03672 1.23129 0.95639 0.79543 1.02966 1.86470 1.23821 1.33041 1.83826 1.22837 0.81081 0.91546 0.73073 1.90722 1.60383 1.42455 1.43793 1.21982 0.97562 0.92258 1.01324 0.85108 1.23803 0.95597 1.02879 0.95929 1.21413 0.95619 0.79534 0.95675 1.93051 1.97085 1.38375 1.86063 1.31393 1.10333 1.09124 1.29314 1.05854 0.74128 0.74971 0.76803 1.93663 1.44084 1.75969 1.79237 1.93696 1.81560 1.38279 1.76505 1.85832 1.67603 1.23974 1.83086 1.17342 1.05235 0.79894 0.96546 1.18869 0.91844 0.90129 0.87218 1.86247 1.68428 1.38454 1.27083 1.23377 0.95423 0.98124 0.90776 1.21132 1.04572 0.92665 0.99235 1.21392 1.02276 0.91344 0.97339 1.96397 1.92921 1.07868 1.85651 1.19961 0.99217 0.93870 0.97487 1.25034 1.10079 0.95879 0.85871 1.86602 1.40970 1.48908 1.56955 0.93674 0.78785 0.90557 0.93536 1.20943 0.98592 0.94034 0.96618 1.23569 0.93835 1.06466 0.92377 0.89908 0.91300 0.91365 0.90975 0.90873 0.85606 0.87914 0.82346 0.83013 0.91634 0.91360 0.86900 0.81961 0.84897 0.77916 1.14803 1.16296 0.81758 0.87477 0.86059 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.16 10.29 37.16 0.38 0.55 16 2 C 0.06 0.07 6.19 37.16 0.23 0.30 16 3 O -0.35 -0.82 10.22 -39.26 -0.40 -1.23 16 4 C 0.47 1.31 6.90 36.01 0.25 1.56 16 5 O -0.49 -2.81 14.56 -18.75 -0.27 -3.08 16 6 C -0.11 0.11 4.45 -90.96 -0.40 -0.30 16 7 H 0.13 -0.50 8.14 -51.93 -0.42 -0.92 16 8 C -0.14 0.17 7.11 -25.92 -0.18 -0.01 16 9 C 0.10 0.05 1.61 -89.80 -0.14 -0.10 16 10 F -0.17 -0.83 14.66 2.25 0.03 -0.79 16 11 C -0.68 1.12 5.19 37.16 0.19 1.31 16 12 S 2.59 7.81 4.89 -107.50 -0.53 7.29 16 13 O -0.93 -3.62 15.82 -68.53 -1.08 -4.71 16 14 O -0.90 -6.62 17.53 -67.04 -1.18 -7.79 16 15 O -0.65 -1.60 9.84 -54.28 -0.53 -2.14 16 16 C 0.05 0.05 4.80 -39.12 -0.19 -0.14 16 17 C 0.17 0.12 5.93 -39.12 -0.23 -0.11 16 18 O -0.29 -0.46 9.73 -41.49 -0.40 -0.87 16 19 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 20 C -0.16 0.32 8.77 -39.43 -0.35 -0.03 16 21 C -0.04 0.10 5.81 -39.52 -0.23 -0.13 16 22 Br 0.09 -0.32 27.32 -68.01 -1.86 -2.17 16 23 C -0.10 0.20 5.13 -104.58 -0.54 -0.34 16 24 C -0.06 0.12 2.84 36.01 0.10 0.22 16 25 O -0.53 0.98 11.64 -35.23 -0.41 0.57 16 26 Si 0.54 -0.60 26.82 -169.99 -4.56 -5.16 16 27 C -0.08 0.13 7.66 -39.46 -0.30 -0.17 16 28 C -0.12 0.21 6.93 -25.91 -0.18 0.03 16 29 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 30 H 0.07 -0.07 8.14 -51.92 -0.42 -0.49 16 31 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 32 H 0.07 0.06 8.13 -51.93 -0.42 -0.36 16 33 H 0.07 0.11 8.13 -51.93 -0.42 -0.31 16 34 H 0.13 -0.56 7.97 -51.93 -0.41 -0.97 16 35 H 0.10 -0.01 8.10 -51.93 -0.42 -0.43 16 36 H 0.16 -0.60 8.14 -51.93 -0.42 -1.03 16 37 H 0.15 -0.87 6.44 -51.93 -0.33 -1.20 16 38 H 0.07 -0.32 7.66 -51.93 -0.40 -0.72 16 39 H 0.07 -0.29 7.67 -51.93 -0.40 -0.68 16 40 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 41 H 0.16 -0.78 6.30 -52.48 -0.33 -1.11 16 42 H 0.13 -0.37 7.96 -51.93 -0.41 -0.78 16 43 H 0.37 -2.02 8.44 45.56 0.38 -1.64 16 44 H -0.23 -0.43 7.11 56.52 0.40 -0.03 16 45 H -0.24 -0.13 7.11 56.52 0.40 0.27 16 46 H 0.17 -0.68 6.56 -52.49 -0.34 -1.03 16 47 H 0.11 0.00 7.42 -51.93 -0.39 -0.38 16 48 H 0.12 -0.66 8.10 -51.93 -0.42 -1.08 16 LS Contribution 424.39 15.07 6.40 6.40 Total: 0.00 -13.51 424.39 -11.45 -24.96 By element: Atomic # 1 Polarization: -8.81 SS G_CDS: -6.05 Total: -14.86 kcal Atomic # 6 Polarization: 4.19 SS G_CDS: -0.60 Total: 3.59 kcal Atomic # 8 Polarization: -14.96 SS G_CDS: -4.28 Total: -19.24 kcal Atomic # 9 Polarization: -0.83 SS G_CDS: 0.03 Total: -0.79 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: -4.56 Total: -5.16 kcal Atomic # 16 Polarization: 7.81 SS G_CDS: -0.53 Total: 7.29 kcal Atomic # 35 Polarization: -0.32 SS G_CDS: -1.86 Total: -2.17 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -13.51 -11.45 -24.96 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_40_79904_15494190.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -209.108 kcal (2) G-P(sol) polarization free energy of solvation -13.509 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -222.618 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.448 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.957 kcal (6) G-S(sol) free energy of system = (1) + (5) -234.065 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.79 seconds