Wall clock time and date at job start Tue Mar 9 2021 13:10:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52997 * 109.47226 * 2 1 4 4 C 1.53003 * 109.47366 * 239.99802 * 2 1 3 5 5 O 1.45206 * 109.47083 * 119.99873 * 2 1 3 6 6 C 1.34628 * 117.00247 * 60.00165 * 5 2 1 7 7 O 1.21516 * 120.00068 * 359.97438 * 6 5 2 8 8 N 1.34774 * 120.00560 * 180.02562 * 6 5 2 9 9 C 1.46500 * 120.00388 * 180.02562 * 8 6 5 10 10 H 1.08998 * 112.84612 * 336.18871 * 9 8 6 11 11 C 1.53780 * 113.69360 * 107.46310 * 9 8 6 12 12 C 1.53781 * 87.07980 * 89.12485 * 11 9 8 13 13 H 1.08998 * 113.69324 * 270.87571 * 12 11 9 14 14 C 1.53000 * 113.61348 * 139.98036 * 12 11 9 15 15 O 1.42898 * 109.47073 * 87.50183 * 14 12 11 16 16 C 1.35901 * 117.00081 * 180.02562 * 15 14 12 17 17 C 1.38665 * 120.04292 * 0.25469 * 16 15 14 18 18 C 1.38390 * 119.91770 * 180.23140 * 17 16 15 19 19 F 1.35104 * 119.99478 * 179.78958 * 18 17 16 20 20 C 1.38476 * 120.00516 * 359.51826 * 18 17 16 21 21 C 1.50694 * 119.95483 * 180.23115 * 20 18 17 22 22 O 1.42903 * 109.47338 * 75.00039 * 21 20 18 23 23 Si 1.86300 * 109.47067 * 194.99847 * 21 20 18 24 24 C 1.38252 * 120.08366 * 0.24962 * 20 18 17 25 25 C 1.38131 * 120.08124 * 359.97438 * 24 20 18 26 26 C 1.53780 * 87.08380 * 25.43627 * 12 11 9 27 27 H 1.09002 * 109.47266 * 300.00018 * 1 2 3 28 28 H 1.08994 * 109.46923 * 60.00334 * 1 2 3 29 29 H 1.08998 * 109.47006 * 180.02562 * 1 2 3 30 30 H 1.09004 * 109.47427 * 179.97438 * 3 2 1 31 31 H 1.09006 * 109.47292 * 299.99767 * 3 2 1 32 32 H 1.08999 * 109.47513 * 59.99870 * 3 2 1 33 33 H 1.08998 * 109.46800 * 299.99810 * 4 2 1 34 34 H 1.09001 * 109.46869 * 59.99880 * 4 2 1 35 35 H 1.08998 * 109.47213 * 180.02562 * 4 2 1 36 36 H 0.97001 * 119.99520 * 359.97438 * 8 6 5 37 37 H 1.08997 * 113.60951 * 334.57979 * 11 9 8 38 38 H 1.08999 * 113.61250 * 203.67457 * 11 9 8 39 39 H 1.09007 * 109.47063 * 327.50498 * 14 12 11 40 40 H 1.09000 * 109.47456 * 207.50655 * 14 12 11 41 41 H 1.07999 * 120.04413 * 0.02562 * 17 16 15 42 42 H 1.09000 * 109.47648 * 315.00005 * 21 20 18 43 43 H 0.96692 * 114.00084 * 59.99514 * 22 21 20 44 44 H 1.48499 * 109.99896 * 180.02562 * 23 21 20 45 45 H 1.48502 * 109.99791 * 301.32039 * 23 21 20 46 46 H 1.08001 * 119.95677 * 180.02562 * 24 20 18 47 47 H 1.07997 * 119.99893 * 180.02562 * 25 24 20 48 48 H 1.08992 * 113.62029 * 89.11241 * 26 12 11 49 49 H 1.09001 * 113.61482 * 220.02061 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6523 -1.9722 1.3384 7 8 0.9509 -2.5095 0.5041 8 7 2.0672 -2.6654 2.4172 9 6 1.6741 -4.0668 2.5832 10 1 0.7601 -4.3166 2.0444 11 6 2.8214 -5.0628 2.3453 12 6 3.1487 -4.9221 3.8413 13 1 3.8459 -4.1141 4.0630 14 6 3.5369 -6.2421 4.5105 15 8 4.9423 -6.4553 4.3638 16 6 5.4538 -7.5917 4.9057 17 6 4.6196 -8.4854 5.5601 18 6 5.1440 -9.6395 6.1151 19 9 4.3333 -10.5092 6.7567 20 6 6.4987 -9.9058 6.0080 21 6 7.0677 -11.1655 6.6083 22 8 6.7176 -12.2835 5.7900 23 14 8.9228 -11.0240 6.7057 24 6 7.3298 -9.0173 5.3514 25 6 6.8109 -7.8620 4.8001 26 6 1.6742 -4.5374 4.0473 27 1 -0.3634 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 3.1300 1.4425 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 1.9564 0.8899 33 1 1.6768 -1.7489 -1.2491 34 1 1.6767 -0.2075 -2.1392 35 1 3.1300 -0.7217 -1.2490 36 1 2.6268 -2.2364 3.0834 37 1 3.6031 -4.6797 1.6894 38 1 2.4826 -6.0600 2.0643 39 1 2.9940 -7.0617 4.0395 40 1 3.2843 -6.2004 5.5700 41 1 3.5624 -8.2794 5.6394 42 1 6.6610 -11.3067 7.6097 43 1 7.0473 -12.2255 4.8829 44 1 9.4961 -12.2604 7.2955 45 1 9.4868 -10.7994 5.3504 46 1 8.3860 -9.2272 5.2687 47 1 7.4613 -7.1690 4.2872 48 1 1.0218 -5.3909 4.2316 49 1 1.5297 -3.7302 4.7654 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_11680688_15734082.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:29 Heat of formation + Delta-G solvation = -140.723620 kcal Electronic energy + Delta-G solvation = -30964.003242 eV Core-core repulsion = 26387.814980 eV Total energy + Delta-G solvation = -4576.188262 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.172 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -49.90010 -41.93633 -41.39116 -40.43068 -39.06247 -37.81785 -37.25783 -35.28214 -34.12089 -32.16061 -31.82268 -29.57234 -28.33429 -28.29466 -26.96768 -26.41554 -25.06208 -23.95610 -23.03777 -22.57319 -21.11589 -20.47143 -19.72081 -19.24056 -18.45249 -17.99833 -17.54800 -17.28860 -17.17140 -17.06280 -16.84552 -16.51976 -16.24804 -16.11262 -15.79849 -15.50673 -15.37298 -15.26458 -15.10389 -14.92469 -14.57272 -14.33702 -14.02719 -13.87709 -13.66863 -13.42388 -13.30226 -13.14783 -13.02409 -12.86021 -12.83448 -12.67308 -12.47225 -12.27636 -12.26196 -12.08898 -12.03844 -11.79914 -11.71826 -11.39080 -11.30483 -10.98599 -10.63542 -10.21833 -10.07135 -9.34832 -5.01109 0.00868 0.05389 1.13333 1.21550 1.51337 1.84016 1.90179 1.92159 2.37849 3.07021 3.12744 3.20001 3.29169 3.33615 3.50658 3.57139 3.59787 3.70510 3.76929 3.82538 3.82720 3.96443 4.00793 4.04545 4.16881 4.18778 4.33169 4.43410 4.49973 4.51287 4.52574 4.56090 4.62529 4.73117 4.77601 4.80793 4.85082 4.88208 4.88910 4.89672 4.92479 4.95974 5.02631 5.08515 5.10461 5.31812 5.35952 5.46777 5.53626 5.59323 6.18305 6.37820 6.38490 7.40272 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.364 6.364 6 C 0.653 3.347 7 O -0.564 6.564 8 N -0.695 5.695 9 C 0.138 3.862 10 H 0.111 0.889 11 C -0.146 4.146 12 C -0.111 4.111 13 H 0.105 0.895 14 C 0.065 3.935 15 O -0.304 6.304 16 C 0.169 3.831 17 C -0.249 4.249 18 C 0.168 3.832 19 F -0.127 7.127 20 C -0.193 4.193 21 C -0.071 4.071 22 O -0.527 6.527 23 Si 0.696 3.304 24 C -0.054 4.054 25 C -0.157 4.157 26 C -0.136 4.136 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.407 0.593 37 H 0.078 0.922 38 H 0.096 0.904 39 H 0.069 0.931 40 H 0.069 0.931 41 H 0.142 0.858 42 H 0.117 0.883 43 H 0.375 0.625 44 H -0.255 1.255 45 H -0.257 1.257 46 H 0.144 0.856 47 H 0.142 0.858 48 H 0.103 0.897 49 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.573 4.379 1.409 4.862 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.407 3.593 7 O -0.453 6.453 8 N -0.354 5.354 9 C 0.033 3.967 10 H 0.129 0.871 11 C -0.185 4.185 12 C -0.129 4.129 13 H 0.123 0.877 14 C -0.010 4.010 15 O -0.217 6.217 16 C 0.122 3.878 17 C -0.269 4.269 18 C 0.148 3.852 19 F -0.106 7.106 20 C -0.194 4.194 21 C -0.181 4.181 22 O -0.333 6.333 23 Si 0.597 3.403 24 C -0.072 4.072 25 C -0.176 4.176 26 C -0.174 4.174 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.242 0.758 37 H 0.097 0.903 38 H 0.115 0.885 39 H 0.087 0.913 40 H 0.087 0.913 41 H 0.160 0.840 42 H 0.135 0.865 43 H 0.222 0.778 44 H -0.180 1.180 45 H -0.182 1.182 46 H 0.161 0.839 47 H 0.160 0.840 48 H 0.122 0.878 49 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 1.734 3.798 1.145 4.329 hybrid contribution -0.633 -0.511 -0.519 0.965 sum 1.100 3.287 0.626 3.523 Atomic orbital electron populations 1.22523 0.93813 1.05054 1.02744 1.22132 0.94465 0.91563 0.81815 1.21881 1.02350 0.92318 1.03359 1.22523 1.01623 1.03448 0.96543 1.86305 1.71460 1.23350 1.46793 1.18058 0.78607 0.80591 0.82078 1.90923 1.40855 1.70518 1.42986 1.44345 1.55547 1.11623 1.23864 1.21742 0.99100 0.78626 0.97221 0.87064 1.23570 0.98850 1.00233 0.95854 1.22676 0.97099 0.96687 0.96467 0.87711 1.22975 0.79013 0.97969 1.01054 1.86128 1.25357 1.37318 1.72885 1.18727 0.92530 0.85287 0.91231 1.21219 1.01545 0.96651 1.07484 1.17162 0.87472 0.87369 0.93184 1.91544 1.72379 1.67954 1.78683 1.20234 0.92734 1.00052 1.06412 1.24938 1.12269 0.83909 0.96968 1.86650 1.78180 1.42163 1.26278 0.94884 0.73499 0.87135 0.84785 1.20855 0.99760 0.92313 0.94260 1.20460 0.92548 0.99333 1.05238 1.23373 0.95402 1.02264 0.96324 0.92103 0.90898 0.89432 0.91379 0.89900 0.91383 0.89430 0.90899 0.92105 0.75793 0.90334 0.88531 0.91293 0.91287 0.83981 0.86515 0.77751 1.17977 1.18235 0.83861 0.83990 0.87833 0.89796 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.21 8.37 37.16 0.31 0.10 16 2 C 0.14 0.16 1.13 -90.62 -0.10 0.05 16 3 C -0.14 0.12 8.85 37.16 0.33 0.45 16 4 C -0.18 -0.22 8.37 37.16 0.31 0.09 16 5 O -0.36 -0.78 9.94 -40.29 -0.40 -1.18 16 6 C 0.65 1.60 8.06 54.05 0.44 2.03 16 7 O -0.56 -2.72 11.48 -19.28 -0.22 -2.94 16 8 N -0.70 0.42 5.27 -57.93 -0.31 0.12 16 9 C 0.14 -0.22 4.32 -67.11 -0.29 -0.51 16 10 H 0.11 -0.02 7.46 -51.93 -0.39 -0.41 16 11 C -0.15 0.28 7.43 -25.92 -0.19 0.09 16 12 C -0.11 0.34 3.89 -89.81 -0.35 -0.01 16 13 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 14 C 0.06 -0.15 4.58 37.16 0.17 0.02 16 15 O -0.30 0.00 10.14 -19.43 -0.20 -0.20 16 16 C 0.17 0.05 6.69 -39.23 -0.26 -0.21 16 17 C -0.25 -0.13 9.02 -39.37 -0.35 -0.48 16 18 C 0.17 0.30 7.24 -39.44 -0.29 0.01 16 19 F -0.13 -0.44 16.75 2.25 0.04 -0.41 16 20 C -0.19 -0.10 5.27 -104.53 -0.55 -0.65 16 21 C -0.07 -0.03 2.45 36.00 0.09 0.06 16 22 O -0.53 -1.08 12.88 -35.23 -0.45 -1.54 16 23 Si 0.70 -0.92 30.24 -169.99 -5.14 -6.06 16 24 C -0.05 0.05 8.65 -39.62 -0.34 -0.29 16 25 C -0.16 0.08 9.99 -39.42 -0.39 -0.32 16 26 C -0.14 0.52 7.39 -25.92 -0.19 0.33 16 27 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 28 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 29 H 0.09 0.28 5.88 -51.93 -0.31 -0.02 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 31 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 32 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.09 0.29 5.88 -51.93 -0.31 -0.01 16 34 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 36 H 0.41 -1.03 8.81 -40.82 -0.36 -1.39 16 37 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 38 H 0.10 -0.23 7.90 -51.93 -0.41 -0.64 16 39 H 0.07 -0.20 7.35 -51.92 -0.38 -0.58 16 40 H 0.07 -0.22 7.67 -51.93 -0.40 -0.62 16 41 H 0.14 -0.14 6.30 -52.49 -0.33 -0.47 16 42 H 0.12 0.05 7.90 -51.93 -0.41 -0.36 16 43 H 0.37 -0.45 8.70 45.56 0.40 -0.06 16 44 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 45 H -0.26 0.05 6.68 56.52 0.38 0.43 16 46 H 0.14 -0.39 4.85 -52.49 -0.25 -0.64 16 47 H 0.14 -0.28 8.06 -52.49 -0.42 -0.70 16 48 H 0.10 -0.49 8.10 -51.93 -0.42 -0.91 16 49 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 LS Contribution 398.45 15.07 6.00 6.00 Total: 0.00 -7.34 398.45 -9.79 -17.12 By element: Atomic # 1 Polarization: -4.24 SS G_CDS: -7.44 Total: -11.68 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: -1.67 Total: 0.76 kcal Atomic # 7 Polarization: 0.42 SS G_CDS: -0.31 Total: 0.12 kcal Atomic # 8 Polarization: -4.58 SS G_CDS: -1.27 Total: -5.86 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.14 Total: -6.06 kcal Total LS contribution 6.00 Total: 6.00 kcal Total: -7.34 -9.79 -17.12 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_11680688_15734082.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -123.602 kcal (2) G-P(sol) polarization free energy of solvation -7.335 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.937 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.787 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.122 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.724 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds