Wall clock time and date at job start Tue Mar 9 2021 13:10:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52997 * 109.47226 * 2 1 4 4 C 1.53003 * 109.47366 * 239.99802 * 2 1 3 5 5 O 1.45206 * 109.47083 * 119.99873 * 2 1 3 6 6 C 1.34628 * 117.00247 * 60.00165 * 5 2 1 7 7 O 1.21516 * 120.00068 * 359.97438 * 6 5 2 8 8 N 1.34774 * 120.00560 * 180.02562 * 6 5 2 9 9 C 1.46500 * 120.00388 * 180.02562 * 8 6 5 10 10 H 1.08998 * 112.84612 * 336.18871 * 9 8 6 11 11 C 1.53780 * 113.69360 * 107.46310 * 9 8 6 12 12 C 1.53781 * 87.07980 * 89.12485 * 11 9 8 13 13 H 1.08998 * 113.69324 * 270.87571 * 12 11 9 14 14 C 1.53000 * 113.61348 * 139.98036 * 12 11 9 15 15 O 1.42898 * 109.47073 * 87.50183 * 14 12 11 16 16 C 1.35901 * 117.00081 * 180.02562 * 15 14 12 17 17 C 1.38665 * 120.04292 * 0.25469 * 16 15 14 18 18 C 1.38390 * 119.91770 * 180.23140 * 17 16 15 19 19 F 1.35104 * 119.99478 * 179.78958 * 18 17 16 20 20 C 1.38476 * 120.00516 * 359.51826 * 18 17 16 21 21 C 1.50694 * 119.95483 * 180.23115 * 20 18 17 22 22 O 1.42903 * 109.47338 * 75.00039 * 21 20 18 23 23 Si 1.86300 * 109.47067 * 194.99847 * 21 20 18 24 24 C 1.38252 * 120.08366 * 0.24962 * 20 18 17 25 25 C 1.38131 * 120.08124 * 359.97438 * 24 20 18 26 26 C 1.53780 * 87.08380 * 25.43627 * 12 11 9 27 27 H 1.09002 * 109.47266 * 300.00018 * 1 2 3 28 28 H 1.08994 * 109.46923 * 60.00334 * 1 2 3 29 29 H 1.08998 * 109.47006 * 180.02562 * 1 2 3 30 30 H 1.09004 * 109.47427 * 179.97438 * 3 2 1 31 31 H 1.09006 * 109.47292 * 299.99767 * 3 2 1 32 32 H 1.08999 * 109.47513 * 59.99870 * 3 2 1 33 33 H 1.08998 * 109.46800 * 299.99810 * 4 2 1 34 34 H 1.09001 * 109.46869 * 59.99880 * 4 2 1 35 35 H 1.08998 * 109.47213 * 180.02562 * 4 2 1 36 36 H 0.97001 * 119.99520 * 359.97438 * 8 6 5 37 37 H 1.08997 * 113.60951 * 334.57979 * 11 9 8 38 38 H 1.08999 * 113.61250 * 203.67457 * 11 9 8 39 39 H 1.09007 * 109.47063 * 327.50498 * 14 12 11 40 40 H 1.09000 * 109.47456 * 207.50655 * 14 12 11 41 41 H 1.07999 * 120.04413 * 0.02562 * 17 16 15 42 42 H 1.09000 * 109.47648 * 315.00005 * 21 20 18 43 43 H 0.96692 * 114.00084 * 59.99514 * 22 21 20 44 44 H 1.48499 * 109.99896 * 180.02562 * 23 21 20 45 45 H 1.48502 * 109.99791 * 301.32039 * 23 21 20 46 46 H 1.08001 * 119.95677 * 180.02562 * 24 20 18 47 47 H 1.07997 * 119.99893 * 180.02562 * 25 24 20 48 48 H 1.08992 * 113.62029 * 89.11241 * 26 12 11 49 49 H 1.09001 * 113.61482 * 220.02061 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6523 -1.9722 1.3384 7 8 0.9509 -2.5095 0.5041 8 7 2.0672 -2.6654 2.4172 9 6 1.6741 -4.0668 2.5832 10 1 0.7601 -4.3166 2.0444 11 6 2.8214 -5.0628 2.3453 12 6 3.1487 -4.9221 3.8413 13 1 3.8459 -4.1141 4.0630 14 6 3.5369 -6.2421 4.5105 15 8 4.9423 -6.4553 4.3638 16 6 5.4538 -7.5917 4.9057 17 6 4.6196 -8.4854 5.5601 18 6 5.1440 -9.6395 6.1151 19 9 4.3333 -10.5092 6.7567 20 6 6.4987 -9.9058 6.0080 21 6 7.0677 -11.1655 6.6083 22 8 6.7176 -12.2835 5.7900 23 14 8.9228 -11.0240 6.7057 24 6 7.3298 -9.0173 5.3514 25 6 6.8109 -7.8620 4.8001 26 6 1.6742 -4.5374 4.0473 27 1 -0.3634 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 3.1300 1.4425 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 1.9564 0.8899 33 1 1.6768 -1.7489 -1.2491 34 1 1.6767 -0.2075 -2.1392 35 1 3.1300 -0.7217 -1.2490 36 1 2.6268 -2.2364 3.0834 37 1 3.6031 -4.6797 1.6894 38 1 2.4826 -6.0600 2.0643 39 1 2.9940 -7.0617 4.0395 40 1 3.2843 -6.2004 5.5700 41 1 3.5624 -8.2794 5.6394 42 1 6.6610 -11.3067 7.6097 43 1 7.0473 -12.2255 4.8829 44 1 9.4961 -12.2604 7.2955 45 1 9.4868 -10.7994 5.3504 46 1 8.3860 -9.2272 5.2687 47 1 7.4613 -7.1690 4.2872 48 1 1.0218 -5.3909 4.2316 49 1 1.5297 -3.7302 4.7654 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_11680688_15734082.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:28 Heat of formation + Delta-G solvation = -138.010677 kcal Electronic energy + Delta-G solvation = -30963.885600 eV Core-core repulsion = 26387.814980 eV Total energy + Delta-G solvation = -4576.070620 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.172 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -50.04448 -41.99406 -41.35641 -40.35957 -39.04858 -37.91691 -37.29506 -35.38603 -34.13229 -32.14944 -31.79299 -29.45823 -28.39026 -28.31943 -26.77763 -26.40509 -25.01962 -23.96772 -23.00084 -22.54255 -21.19203 -20.35330 -19.70175 -19.33227 -18.49290 -17.99179 -17.61000 -17.28118 -17.17116 -17.14783 -16.84242 -16.48371 -16.30018 -16.05631 -15.86116 -15.56675 -15.41386 -15.24233 -15.06415 -14.92122 -14.56058 -14.34128 -14.00727 -13.81959 -13.49738 -13.37637 -13.24472 -13.16579 -12.99153 -12.93508 -12.88811 -12.63794 -12.53678 -12.34669 -12.28181 -11.99983 -11.88144 -11.74362 -11.65330 -11.41994 -11.22357 -11.14651 -10.65513 -10.21555 -10.06233 -9.33095 -4.91822 0.02609 0.05801 1.10465 1.26641 1.57532 1.69479 1.95459 2.02533 2.40150 3.08519 3.11940 3.36085 3.38152 3.48118 3.56312 3.66647 3.71993 3.74556 3.78902 3.82930 3.87690 3.92354 4.09143 4.22622 4.33245 4.39149 4.43351 4.45694 4.52870 4.59273 4.59797 4.72395 4.73734 4.74477 4.81055 4.85783 4.87378 4.89664 4.92806 4.97553 5.01892 5.04929 5.07328 5.14804 5.15859 5.24982 5.29720 5.45298 5.56330 5.59881 6.25973 6.35085 6.46105 7.30364 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.369 6.369 6 C 0.646 3.354 7 O -0.593 6.593 8 N -0.683 5.683 9 C 0.129 3.871 10 H 0.095 0.905 11 C -0.147 4.147 12 C -0.102 4.102 13 H 0.107 0.893 14 C 0.060 3.940 15 O -0.313 6.313 16 C 0.161 3.839 17 C -0.251 4.251 18 C 0.141 3.859 19 F -0.144 7.144 20 C -0.195 4.195 21 C -0.090 4.090 22 O -0.552 6.552 23 Si 0.788 3.212 24 C -0.050 4.050 25 C -0.157 4.157 26 C -0.120 4.120 27 H 0.062 0.938 28 H 0.086 0.914 29 H 0.063 0.937 30 H 0.069 0.931 31 H 0.098 0.902 32 H 0.070 0.930 33 H 0.063 0.937 34 H 0.087 0.913 35 H 0.061 0.939 36 H 0.417 0.583 37 H 0.062 0.938 38 H 0.100 0.900 39 H 0.074 0.926 40 H 0.080 0.920 41 H 0.153 0.847 42 H 0.110 0.890 43 H 0.387 0.613 44 H -0.304 1.304 45 H -0.263 1.263 46 H 0.165 0.835 47 H 0.159 0.841 48 H 0.117 0.883 49 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.364 5.614 1.628 6.305 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.283 6.283 6 C 0.399 3.601 7 O -0.484 6.484 8 N -0.343 5.343 9 C 0.025 3.975 10 H 0.113 0.887 11 C -0.185 4.185 12 C -0.120 4.120 13 H 0.125 0.875 14 C -0.015 4.015 15 O -0.227 6.227 16 C 0.115 3.885 17 C -0.270 4.270 18 C 0.121 3.879 19 F -0.123 7.123 20 C -0.197 4.197 21 C -0.197 4.197 22 O -0.360 6.360 23 Si 0.691 3.309 24 C -0.067 4.067 25 C -0.176 4.176 26 C -0.157 4.157 27 H 0.081 0.919 28 H 0.105 0.895 29 H 0.082 0.918 30 H 0.088 0.912 31 H 0.117 0.883 32 H 0.089 0.911 33 H 0.082 0.918 34 H 0.106 0.894 35 H 0.080 0.920 36 H 0.254 0.746 37 H 0.081 0.919 38 H 0.119 0.881 39 H 0.093 0.907 40 H 0.099 0.901 41 H 0.170 0.830 42 H 0.127 0.873 43 H 0.236 0.764 44 H -0.232 1.232 45 H -0.189 1.189 46 H 0.182 0.818 47 H 0.176 0.824 48 H 0.135 0.865 49 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 2.511 5.056 1.374 5.810 hybrid contribution -0.905 -0.918 -0.610 1.426 sum 1.605 4.138 0.765 4.504 Atomic orbital electron populations 1.22474 0.93984 1.03698 1.03564 1.22364 0.94504 0.92591 0.81450 1.21893 1.02463 0.90823 1.04289 1.22474 1.01619 1.02227 0.97414 1.86310 1.71506 1.23224 1.47299 1.18324 0.78562 0.80741 0.82449 1.90909 1.42264 1.71064 1.44188 1.44363 1.54967 1.11831 1.23107 1.21843 0.98569 0.78150 0.98959 0.88733 1.23567 0.98189 1.00182 0.96585 1.22606 0.97611 0.96533 0.95239 0.87530 1.23135 0.78098 0.98334 1.01917 1.86118 1.26546 1.37115 1.72895 1.18868 0.92940 0.85392 0.91313 1.21328 1.02252 0.96254 1.07181 1.17479 0.88047 0.87938 0.94413 1.91495 1.72916 1.68615 1.79256 1.20318 0.92497 1.00275 1.06583 1.25305 1.14364 0.83532 0.96499 1.86606 1.78990 1.43028 1.27370 0.93835 0.70086 0.84429 0.82572 1.21041 1.00506 0.91730 0.93420 1.20750 0.92555 0.99552 1.04720 1.23330 0.94964 1.02842 0.94604 0.91855 0.89469 0.91799 0.91182 0.88310 0.91106 0.91846 0.89447 0.91975 0.74574 0.91893 0.88149 0.90745 0.90148 0.82976 0.87252 0.76406 1.23220 1.18868 0.81815 0.82360 0.86481 0.88743 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.52 8.37 71.98 0.60 0.09 16 2 C 0.13 0.33 1.13 -10.79 -0.01 0.32 16 3 C -0.14 0.34 8.85 71.98 0.64 0.98 16 4 C -0.18 -0.56 8.37 71.98 0.60 0.04 16 5 O -0.37 -1.84 9.94 -55.38 -0.55 -2.39 16 6 C 0.65 3.96 8.06 129.79 1.05 5.00 16 7 O -0.59 -6.93 11.48 19.79 0.23 -6.70 16 8 N -0.68 0.42 5.27 -567.61 -2.99 -2.57 16 9 C 0.13 -0.35 4.32 45.52 0.20 -0.15 16 10 H 0.09 0.10 7.46 -2.39 -0.02 0.08 16 11 C -0.15 0.51 7.43 31.12 0.23 0.74 16 12 C -0.10 0.69 3.89 -10.27 -0.04 0.65 16 13 H 0.11 -0.72 8.14 -2.39 -0.02 -0.74 16 14 C 0.06 -0.33 4.58 71.98 0.33 0.00 16 15 O -0.31 0.22 10.14 -92.43 -0.94 -0.72 16 16 C 0.16 0.02 6.69 22.50 0.15 0.17 16 17 C -0.25 -0.28 9.02 22.41 0.20 -0.08 16 18 C 0.14 0.60 7.24 22.36 0.16 0.77 16 19 F -0.14 -1.23 16.75 44.97 0.75 -0.47 16 20 C -0.20 -0.23 5.27 -19.81 -0.10 -0.34 16 21 C -0.09 -0.12 2.45 71.23 0.17 0.06 16 22 O -0.55 -2.78 12.88 -148.98 -1.92 -4.69 16 23 Si 0.79 -2.44 30.24 68.60 2.07 -0.37 16 24 C -0.05 0.14 8.65 22.25 0.19 0.33 16 25 C -0.16 0.33 9.99 22.37 0.22 0.55 16 26 C -0.12 1.01 7.39 31.12 0.23 1.24 16 27 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 28 H 0.09 -0.05 8.14 -2.39 -0.02 -0.06 16 29 H 0.06 0.52 5.88 -2.39 -0.01 0.51 16 30 H 0.07 -0.18 8.14 -2.38 -0.02 -0.20 16 31 H 0.10 -0.56 8.14 -2.38 -0.02 -0.58 16 32 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 33 H 0.06 0.54 5.88 -2.39 -0.01 0.53 16 34 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 35 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 36 H 0.42 -2.13 8.81 -92.71 -0.82 -2.95 16 37 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 38 H 0.10 -0.43 7.90 -2.39 -0.02 -0.45 16 39 H 0.07 -0.49 7.35 -2.38 -0.02 -0.50 16 40 H 0.08 -0.61 7.67 -2.39 -0.02 -0.63 16 41 H 0.15 -0.31 6.30 -2.91 -0.02 -0.33 16 42 H 0.11 0.23 7.90 -2.39 -0.02 0.21 16 43 H 0.39 -0.72 8.70 -74.06 -0.64 -1.37 16 44 H -0.30 -1.56 7.11 99.48 0.71 -0.85 16 45 H -0.26 0.56 6.68 99.48 0.66 1.23 16 46 H 0.16 -1.21 4.85 -2.91 -0.01 -1.22 16 47 H 0.16 -0.89 8.06 -2.91 -0.02 -0.91 16 48 H 0.12 -1.26 8.10 -2.39 -0.02 -1.28 16 49 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 Total: 0.00 -19.08 398.45 1.00 -18.07 By element: Atomic # 1 Polarization: -10.03 SS G_CDS: -0.48 Total: -10.51 kcal Atomic # 6 Polarization: 5.53 SS G_CDS: 4.82 Total: 10.35 kcal Atomic # 7 Polarization: 0.42 SS G_CDS: -2.99 Total: -2.57 kcal Atomic # 8 Polarization: -11.33 SS G_CDS: -3.18 Total: -14.51 kcal Atomic # 9 Polarization: -1.23 SS G_CDS: 0.75 Total: -0.47 kcal Atomic # 14 Polarization: -2.44 SS G_CDS: 2.07 Total: -0.37 kcal Total: -19.08 1.00 -18.07 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_11680688_15734082.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.937 kcal (2) G-P(sol) polarization free energy of solvation -19.077 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -139.013 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.003 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.074 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.011 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds