Wall clock time and date at job start Tue Mar 9 2021 13:10:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52998 * 109.46989 * 2 1 4 4 C 1.53002 * 109.46943 * 240.00160 * 2 1 3 5 5 O 1.45196 * 109.47120 * 119.99853 * 2 1 3 6 6 C 1.34644 * 116.99750 * 60.00078 * 5 2 1 7 7 O 1.21507 * 119.99930 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99827 * 179.97438 * 6 5 2 9 9 C 1.46496 * 120.00258 * 179.97438 * 8 6 5 10 10 H 1.09002 * 112.84597 * 336.20253 * 9 8 6 11 11 C 1.53783 * 113.61176 * 107.50310 * 9 8 6 12 12 C 1.53792 * 87.07761 * 139.98581 * 11 9 8 13 13 H 1.09000 * 113.61239 * 89.11728 * 12 11 9 14 14 C 1.53002 * 113.68526 * 220.00784 * 12 11 9 15 15 O 1.42900 * 109.46781 * 272.53049 * 14 12 11 16 16 C 1.35906 * 116.99637 * 180.02562 * 15 14 12 17 17 C 1.38673 * 120.04081 * 359.72707 * 16 15 14 18 18 C 1.38383 * 119.91428 * 179.74531 * 17 16 15 19 19 F 1.35102 * 119.99673 * 180.25319 * 18 17 16 20 20 C 1.38471 * 120.00753 * 0.55594 * 18 17 16 21 21 C 1.50701 * 119.95716 * 179.72534 * 20 18 17 22 22 O 1.42905 * 109.47028 * 194.97685 * 21 20 18 23 23 Si 1.86300 * 109.46808 * 314.97261 * 21 20 18 24 24 C 1.38253 * 120.08679 * 359.69680 * 20 18 17 25 25 C 1.38135 * 120.07841 * 0.02562 * 24 20 18 26 26 C 1.53772 * 113.61760 * 205.00304 * 9 8 6 27 27 H 1.09004 * 109.47306 * 299.99804 * 1 2 3 28 28 H 1.09003 * 109.47378 * 60.00136 * 1 2 3 29 29 H 1.09006 * 109.47255 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47084 * 180.02562 * 3 2 1 31 31 H 1.09003 * 109.46954 * 299.99569 * 3 2 1 32 32 H 1.08998 * 109.47592 * 60.00181 * 3 2 1 33 33 H 1.09005 * 109.46853 * 299.99576 * 4 2 1 34 34 H 1.08994 * 109.47198 * 59.99893 * 4 2 1 35 35 H 1.08999 * 109.46961 * 179.97438 * 4 2 1 36 36 H 0.96999 * 120.00047 * 0.02562 * 8 6 5 37 37 H 1.09004 * 113.61290 * 254.52714 * 11 9 8 38 38 H 1.08998 * 113.61645 * 25.44020 * 11 9 8 39 39 H 1.08994 * 109.47379 * 32.53769 * 14 12 11 40 40 H 1.09004 * 109.46270 * 152.53980 * 14 12 11 41 41 H 1.07999 * 120.03895 * 0.02562 * 17 16 15 42 42 H 1.08994 * 109.47579 * 74.97653 * 21 20 18 43 43 H 0.96703 * 113.99964 * 59.99693 * 22 21 20 44 44 H 1.48497 * 109.99864 * 58.68524 * 23 21 20 45 45 H 1.48509 * 109.99671 * 179.97438 * 23 21 20 46 46 H 1.07994 * 119.95928 * 180.02562 * 24 20 18 47 47 H 1.07996 * 120.00198 * 179.97438 * 25 24 20 48 48 H 1.09001 * 113.61542 * 334.56637 * 26 9 8 49 49 H 1.08998 * 113.61797 * 105.47101 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0140 -0.6844 1.1855 6 6 1.6522 -1.9723 1.3383 7 8 0.9508 -2.5094 0.5040 8 7 2.0680 -2.6657 2.4166 9 6 1.6739 -4.0668 2.5832 10 1 0.7591 -4.3160 2.0454 11 6 2.8217 -5.0621 2.3443 12 6 2.2735 -5.8599 3.5393 13 1 1.5232 -6.6006 3.2625 14 6 3.3632 -6.4296 4.4499 15 8 3.7727 -7.7081 3.9602 16 6 4.7412 -8.3554 4.6602 17 6 5.2896 -7.7696 5.7912 18 6 6.2719 -8.4334 6.5049 19 9 6.8037 -7.8664 7.6099 20 6 6.7142 -9.6759 6.0832 21 6 7.7884 -10.3951 6.8579 22 8 8.3169 -11.4592 6.0638 23 14 9.1532 -9.2002 7.2826 24 6 6.1713 -10.2579 4.9527 25 6 5.1866 -9.6010 4.2408 26 6 1.6755 -4.5373 4.0472 27 1 -0.3634 0.5138 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 3.1299 1.4425 -0.0005 31 1 1.6766 1.9563 -0.8901 32 1 1.6767 1.9564 0.8900 33 1 1.6766 -1.7489 -1.2492 34 1 1.6766 -0.2074 -2.1392 35 1 3.1299 -0.7208 -1.2495 36 1 2.6275 -2.2368 3.0828 37 1 2.7490 -5.5926 1.3949 38 1 3.8106 -4.6383 2.5191 39 1 4.2180 -5.7535 4.4603 40 1 2.9719 -6.5363 5.4617 41 1 4.9473 -6.7985 6.1170 42 1 7.3637 -10.8027 7.7752 43 1 8.7119 -11.1691 5.2302 44 1 8.6103 -8.0723 8.0814 45 1 10.2186 -9.8971 8.0473 46 1 6.5176 -11.2272 4.6259 47 1 4.7637 -10.0565 3.3577 48 1 2.3510 -3.9701 4.6874 49 1 0.6776 -4.6443 4.4725 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_11680688_15734236.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:31 Heat of formation + Delta-G solvation = -131.790176 kcal Electronic energy + Delta-G solvation = -30952.161154 eV Core-core repulsion = 26376.360274 eV Total energy + Delta-G solvation = -4575.800879 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.172 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -50.36697 -41.93182 -41.32696 -40.28756 -39.04074 -37.92717 -37.11761 -35.41761 -34.24800 -31.95765 -31.76208 -29.46790 -28.38447 -28.31662 -26.77885 -26.48623 -25.02303 -23.82429 -22.71226 -22.22407 -21.42209 -20.56875 -19.68976 -19.09866 -18.57948 -18.05314 -17.65730 -17.38889 -17.25160 -17.14951 -16.84684 -16.68980 -16.40273 -16.10113 -15.74604 -15.60590 -15.40035 -15.30776 -15.07764 -14.54152 -14.41572 -14.17060 -13.78400 -13.55418 -13.48065 -13.38829 -13.32515 -13.07289 -13.04209 -12.91667 -12.88247 -12.65453 -12.55517 -12.44659 -12.29232 -12.14344 -11.93584 -11.72357 -11.41678 -11.41027 -11.30575 -11.12044 -10.63947 -10.16609 -10.00561 -9.14559 -5.03291 0.01874 0.12801 1.15742 1.29999 1.62701 1.71784 1.95390 2.06506 2.50951 3.08820 3.13983 3.36021 3.38814 3.48713 3.50687 3.72648 3.72836 3.74159 3.78740 3.81270 3.90949 3.92922 4.16213 4.20353 4.26442 4.37552 4.44503 4.50203 4.57569 4.59570 4.63320 4.69972 4.74849 4.78538 4.78885 4.85091 4.86128 4.88350 4.95491 4.98371 5.02992 5.06861 5.11106 5.18492 5.25376 5.27364 5.30765 5.48329 5.58591 5.62832 6.29339 6.38887 6.71908 7.32774 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.642 3.358 7 O -0.595 6.595 8 N -0.689 5.689 9 C 0.133 3.867 10 H 0.104 0.896 11 C -0.145 4.145 12 C -0.100 4.100 13 H 0.106 0.894 14 C 0.064 3.936 15 O -0.316 6.316 16 C 0.153 3.847 17 C -0.243 4.243 18 C 0.114 3.886 19 F -0.136 7.136 20 C -0.190 4.190 21 C -0.056 4.056 22 O -0.548 6.548 23 Si 0.753 3.247 24 C -0.034 4.034 25 C -0.159 4.159 26 C -0.120 4.120 27 H 0.062 0.938 28 H 0.086 0.914 29 H 0.063 0.937 30 H 0.069 0.931 31 H 0.098 0.902 32 H 0.069 0.931 33 H 0.063 0.937 34 H 0.086 0.914 35 H 0.061 0.939 36 H 0.418 0.582 37 H 0.065 0.935 38 H 0.095 0.905 39 H 0.079 0.921 40 H 0.078 0.922 41 H 0.154 0.846 42 H 0.109 0.891 43 H 0.398 0.602 44 H -0.267 1.267 45 H -0.305 1.305 46 H 0.167 0.833 47 H 0.152 0.848 48 H 0.111 0.889 49 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.725 2.965 -1.427 3.370 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.396 3.604 7 O -0.486 6.486 8 N -0.349 5.349 9 C 0.030 3.970 10 H 0.122 0.878 11 C -0.184 4.184 12 C -0.119 4.119 13 H 0.124 0.876 14 C -0.011 4.011 15 O -0.230 6.230 16 C 0.107 3.893 17 C -0.263 4.263 18 C 0.094 3.906 19 F -0.115 7.115 20 C -0.191 4.191 21 C -0.166 4.166 22 O -0.357 6.357 23 Si 0.659 3.341 24 C -0.052 4.052 25 C -0.178 4.178 26 C -0.158 4.158 27 H 0.081 0.919 28 H 0.105 0.895 29 H 0.082 0.918 30 H 0.088 0.912 31 H 0.116 0.884 32 H 0.088 0.912 33 H 0.082 0.918 34 H 0.105 0.895 35 H 0.081 0.919 36 H 0.255 0.745 37 H 0.084 0.916 38 H 0.114 0.886 39 H 0.097 0.903 40 H 0.096 0.904 41 H 0.171 0.829 42 H 0.126 0.874 43 H 0.249 0.751 44 H -0.193 1.193 45 H -0.234 1.234 46 H 0.184 0.816 47 H 0.170 0.830 48 H 0.129 0.871 49 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 0.513 2.815 -0.905 3.001 hybrid contribution -0.304 0.075 0.858 0.914 sum 0.209 2.891 -0.047 2.898 Atomic orbital electron populations 1.22475 0.94052 1.03683 1.03513 1.22344 0.94453 0.92588 0.81536 1.21891 1.02458 0.90883 1.04246 1.22471 1.01627 1.02234 0.97380 1.86313 1.71541 1.23368 1.47232 1.18452 0.78575 0.80695 0.82683 1.90903 1.42354 1.71066 1.44283 1.44766 1.54780 1.12284 1.23021 1.22564 0.98851 0.77118 0.98490 0.87784 1.23609 0.99124 0.96638 0.99003 1.22271 0.97460 0.96286 0.95899 0.87615 1.23062 0.97761 0.81896 0.98378 1.86118 1.51597 1.33679 1.51580 1.18879 0.88310 0.92276 0.89864 1.21267 1.02170 1.03872 0.98956 1.17389 0.95812 0.92436 0.84937 1.91528 1.83899 1.84991 1.51078 1.20292 1.03339 0.94786 1.00687 1.24780 0.99807 0.95925 0.96116 1.86459 1.78935 1.32985 1.37276 0.94509 0.75488 0.77192 0.86920 1.20867 0.92913 0.99814 0.91572 1.20813 1.00180 0.93469 1.03307 1.23354 1.03435 0.94225 0.94823 0.91913 0.89507 0.91797 0.91178 0.88354 0.91156 0.91818 0.89503 0.91950 0.74492 0.91577 0.88639 0.90304 0.90404 0.82856 0.87359 0.75105 1.19291 1.23356 0.81608 0.82995 0.87082 0.88897 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.53 8.37 71.98 0.60 0.07 16 2 C 0.13 0.34 1.13 -10.79 -0.01 0.32 16 3 C -0.14 0.33 8.85 71.98 0.64 0.97 16 4 C -0.18 -0.55 8.37 71.98 0.60 0.05 16 5 O -0.37 -1.82 9.94 -55.54 -0.55 -2.37 16 6 C 0.64 3.83 8.06 129.79 1.05 4.88 16 7 O -0.60 -6.91 11.48 19.82 0.23 -6.68 16 8 N -0.69 0.75 5.36 -567.62 -3.04 -2.29 16 9 C 0.13 -0.38 4.24 45.52 0.19 -0.19 16 10 H 0.10 0.13 7.46 -2.39 -0.02 0.11 16 11 C -0.14 0.54 7.43 31.12 0.23 0.77 16 12 C -0.10 0.62 4.01 -10.26 -0.04 0.58 16 13 H 0.11 -0.53 8.14 -2.39 -0.02 -0.55 16 14 C 0.06 -0.36 4.58 71.98 0.33 -0.03 16 15 O -0.32 0.09 10.14 -92.49 -0.94 -0.85 16 16 C 0.15 0.02 6.69 22.50 0.15 0.17 16 17 C -0.24 -0.03 9.02 22.41 0.20 0.17 16 18 C 0.11 0.27 6.66 22.36 0.15 0.42 16 19 F -0.14 -0.77 12.83 44.97 0.58 -0.19 16 20 C -0.19 -0.03 5.13 -19.80 -0.10 -0.13 16 21 C -0.06 -0.01 2.97 71.24 0.21 0.20 16 22 O -0.55 0.79 11.64 -148.98 -1.73 -0.94 16 23 Si 0.75 0.43 30.81 68.60 2.11 2.55 16 24 C -0.03 0.09 9.23 22.25 0.21 0.29 16 25 C -0.16 0.24 9.99 22.37 0.22 0.46 16 26 C -0.12 1.01 7.39 31.12 0.23 1.24 16 27 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 28 H 0.09 -0.04 8.14 -2.39 -0.02 -0.05 16 29 H 0.06 0.53 5.88 -2.38 -0.01 0.51 16 30 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 31 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 32 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 33 H 0.06 0.54 5.88 -2.38 -0.01 0.52 16 34 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 35 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 36 H 0.42 -2.53 8.84 -92.71 -0.82 -3.35 16 37 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 38 H 0.10 -0.47 7.90 -2.39 -0.02 -0.49 16 39 H 0.08 -0.61 7.36 -2.39 -0.02 -0.62 16 40 H 0.08 -0.57 7.67 -2.39 -0.02 -0.59 16 41 H 0.15 -0.50 6.30 -2.91 -0.02 -0.52 16 42 H 0.11 0.22 7.96 -2.39 -0.02 0.20 16 43 H 0.40 -4.06 8.43 -74.06 -0.62 -4.69 16 44 H -0.27 -1.67 5.28 99.48 0.52 -1.14 16 45 H -0.31 -2.39 7.11 99.48 0.71 -1.68 16 46 H 0.17 -1.06 7.08 -2.91 -0.02 -1.08 16 47 H 0.15 -0.63 8.06 -2.91 -0.02 -0.66 16 48 H 0.11 -1.30 8.08 -2.39 -0.02 -1.32 16 49 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 Total: 0.00 -18.51 395.01 0.90 -17.61 By element: Atomic # 1 Polarization: -16.46 SS G_CDS: -0.61 Total: -17.07 kcal Atomic # 6 Polarization: 5.38 SS G_CDS: 4.86 Total: 10.24 kcal Atomic # 7 Polarization: 0.75 SS G_CDS: -3.04 Total: -2.29 kcal Atomic # 8 Polarization: -7.84 SS G_CDS: -3.00 Total: -10.84 kcal Atomic # 9 Polarization: -0.77 SS G_CDS: 0.58 Total: -0.19 kcal Atomic # 14 Polarization: 0.43 SS G_CDS: 2.11 Total: 2.55 kcal Total: -18.51 0.90 -17.61 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_11680688_15734236.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.184 kcal (2) G-P(sol) polarization free energy of solvation -18.511 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.694 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.904 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.606 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.790 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds