Wall clock time and date at job start Tue Mar 9 2021 13:17:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.38344 * 119.97990 * 2 1 4 4 Cl 1.73606 * 119.95356 * 0.02562 * 3 2 1 5 5 C 1.38385 * 120.08835 * 179.97438 * 3 2 1 6 6 C 1.38122 * 120.04303 * 359.97438 * 5 3 2 7 7 C 1.50696 * 120.02555 * 179.97438 * 6 5 3 8 8 O 1.42901 * 109.47131 * 104.99963 * 7 6 5 9 9 Si 1.86302 * 109.46797 * 345.00199 * 7 6 5 10 10 C 1.38746 * 119.95528 * 359.76729 * 6 5 3 11 11 O 1.35921 * 120.04667 * 180.25602 * 10 6 5 12 12 C 1.42892 * 117.00532 * 180.25159 * 11 10 6 13 13 C 1.52999 * 109.47399 * 180.02562 * 12 11 10 14 14 H 1.09000 * 112.84859 * 316.19643 * 13 12 11 15 15 C 1.53783 * 113.61668 * 87.50406 * 13 12 11 16 16 C 1.53781 * 87.08404 * 139.98114 * 15 13 12 17 17 H 1.08998 * 113.68818 * 89.12242 * 16 15 13 18 18 N 1.46492 * 113.61426 * 220.02100 * 16 15 13 19 19 C 1.34779 * 119.99727 * 252.49555 * 18 16 15 20 20 O 1.21507 * 120.00344 * 359.97438 * 19 18 16 21 21 O 1.34637 * 119.99976 * 180.02562 * 19 18 16 22 22 C 1.45200 * 117.00203 * 180.02562 * 21 19 18 23 23 C 1.52991 * 109.47233 * 59.99639 * 22 21 19 24 24 C 1.53003 * 109.47238 * 180.02562 * 22 21 19 25 25 C 1.53007 * 109.46831 * 299.99722 * 22 21 19 26 26 C 1.53782 * 113.61650 * 185.00360 * 13 12 11 27 27 C 1.38170 * 119.98017 * 179.97438 * 2 1 3 28 28 H 1.09001 * 109.47239 * 270.01815 * 1 2 3 29 29 H 1.09002 * 109.47466 * 30.01790 * 1 2 3 30 30 H 1.09003 * 109.47225 * 150.02463 * 1 2 3 31 31 H 1.07998 * 119.97763 * 180.02562 * 5 3 2 32 32 H 1.08997 * 109.47337 * 225.00130 * 7 6 5 33 33 H 0.96705 * 114.00172 * 299.99916 * 8 7 6 34 34 H 1.48503 * 110.00235 * 58.68227 * 9 7 6 35 35 H 1.48497 * 110.00059 * 179.97438 * 9 7 6 36 36 H 1.09002 * 109.47203 * 300.00232 * 12 11 10 37 37 H 1.09001 * 109.47134 * 59.99882 * 12 11 10 38 38 H 1.08996 * 113.61439 * 254.53334 * 15 13 12 39 39 H 1.09000 * 113.60925 * 25.43345 * 15 13 12 40 40 H 0.96995 * 120.00491 * 72.49560 * 18 16 15 41 41 H 1.09004 * 109.47143 * 60.00564 * 23 22 21 42 42 H 1.09004 * 109.47396 * 180.02562 * 23 22 21 43 43 H 1.09003 * 109.47457 * 300.00228 * 23 22 21 44 44 H 1.08998 * 109.47416 * 59.99575 * 24 22 21 45 45 H 1.08996 * 109.46939 * 179.97438 * 24 22 21 46 46 H 1.08997 * 109.46938 * 299.99768 * 24 22 21 47 47 H 1.08994 * 109.46987 * 59.99711 * 25 22 21 48 48 H 1.08999 * 109.47169 * 180.02562 * 25 22 21 49 49 H 1.08998 * 109.47048 * 299.99950 * 25 22 21 50 50 H 1.09000 * 113.61412 * 334.56546 * 26 13 12 51 51 H 1.08999 * 113.61848 * 105.38514 * 26 13 12 52 52 H 1.08002 * 120.01798 * 0.02562 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1982 1.1983 0.0000 4 17 1.3285 2.7008 0.0007 5 6 3.5821 1.2010 0.0005 6 6 4.2759 0.0066 0.0016 7 6 5.7828 0.0099 0.0016 8 8 6.2599 -0.3366 1.3033 9 14 6.4000 1.7076 -0.4545 10 6 3.5844 -1.1962 0.0070 11 8 4.2652 -2.3726 0.0133 12 6 3.4884 -3.5719 0.0131 13 6 4.4217 -4.7842 0.0213 14 1 5.2577 -4.6794 -0.6702 15 6 4.8392 -5.2307 1.4324 16 6 4.6794 -6.6776 0.9366 17 1 5.5862 -7.0923 0.4962 18 7 4.0654 -7.5711 1.9218 19 6 4.8151 -8.4981 2.5503 20 8 6.0003 -8.5930 2.2995 21 8 4.2507 -9.3197 3.4554 22 6 5.1186 -10.2932 4.0936 23 6 6.2384 -9.5660 4.8405 24 6 4.3053 -11.1307 5.0826 25 6 5.7264 -11.2094 3.0295 26 6 3.6859 -6.1290 -0.1012 27 6 2.1974 -1.1968 0.0005 28 1 -0.3634 0.0003 1.0277 29 1 -0.3634 0.8898 -0.5141 30 1 -0.3634 -0.8902 -0.5135 31 1 4.1199 2.1375 0.0010 32 1 6.1478 -0.7165 -0.7244 33 1 5.9733 0.2684 2.0012 34 1 5.8832 2.7119 0.5096 35 1 7.8849 1.7243 -0.4575 36 1 2.8555 -3.5951 0.9003 37 1 2.8636 -3.5999 -0.8797 38 1 5.8656 -4.9675 1.6878 39 1 4.1246 -4.9534 2.2074 40 1 3.1193 -7.4957 2.1217 41 1 5.8054 -8.9134 5.5985 42 1 6.8902 -10.2969 5.3192 43 1 6.8178 -8.9697 4.1356 44 1 3.5077 -11.6488 4.5501 45 1 4.9567 -11.8618 5.5613 46 1 3.8719 -10.4783 5.8406 47 1 6.3057 -10.6131 2.3246 48 1 6.3776 -11.9405 3.5086 49 1 4.9286 -11.7275 2.4974 50 1 2.6561 -6.0973 0.2545 51 1 3.7801 -6.5904 -1.0843 52 1 1.6573 -2.1321 0.0005 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_12058104_15734236.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:17:20 Heat of formation + Delta-G solvation = -106.220545 kcal Electronic energy + Delta-G solvation = -33283.553878 eV Core-core repulsion = 28662.978345 eV Total energy + Delta-G solvation = -4620.575533 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.158 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -41.95742 -41.60189 -40.39306 -38.88454 -38.06890 -37.86638 -37.08595 -35.43786 -34.32943 -34.03003 -31.13407 -29.57020 -29.07630 -28.40298 -28.32982 -26.75351 -25.39341 -25.09871 -23.64088 -22.46130 -22.12359 -21.41645 -20.51181 -19.21578 -18.97360 -18.42511 -17.77523 -17.49380 -17.23697 -17.09121 -16.91697 -16.50109 -16.25127 -15.83940 -15.72762 -15.60757 -15.39479 -15.23211 -14.95938 -14.74093 -14.46270 -14.10727 -13.99841 -13.73013 -13.49101 -13.39659 -13.35285 -13.28401 -13.16567 -12.94664 -12.89839 -12.85257 -12.78732 -12.70763 -12.52674 -12.37480 -12.30515 -12.13630 -11.86370 -11.78895 -11.72848 -11.54677 -11.42691 -11.24721 -11.13431 -10.58787 -10.17976 -9.99401 -9.14027 -4.97342 0.00561 0.11991 1.13911 1.15433 1.25906 1.52739 1.70312 1.89751 2.10088 2.38798 3.12797 3.36993 3.39141 3.47492 3.53245 3.64414 3.71204 3.73450 3.77165 3.79604 3.89969 3.91371 3.97702 4.20038 4.26880 4.29666 4.43527 4.48573 4.50935 4.51540 4.57884 4.60844 4.67921 4.69633 4.73128 4.74277 4.77833 4.78416 4.83512 4.84681 4.91770 4.94679 4.98536 5.03543 5.06869 5.16914 5.18011 5.23723 5.28755 5.29516 5.46344 5.51068 5.57349 6.32725 6.37891 6.48307 7.31577 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.030 4.030 3 C -0.087 4.087 4 Cl -0.068 7.068 5 C -0.074 4.074 6 C -0.155 4.155 7 C -0.065 4.065 8 O -0.542 6.542 9 Si 0.759 3.241 10 C 0.159 3.841 11 O -0.313 6.313 12 C 0.064 3.936 13 C -0.100 4.100 14 H 0.102 0.898 15 C -0.147 4.147 16 C 0.134 3.866 17 H 0.102 0.898 18 N -0.688 5.688 19 C 0.642 3.358 20 O -0.596 6.596 21 O -0.369 6.369 22 C 0.127 3.873 23 C -0.180 4.180 24 C -0.137 4.137 25 C -0.180 4.180 26 C -0.115 4.115 27 C -0.200 4.200 28 H 0.085 0.915 29 H 0.074 0.926 30 H 0.089 0.911 31 H 0.149 0.851 32 H 0.117 0.883 33 H 0.382 0.618 34 H -0.275 1.275 35 H -0.298 1.298 36 H 0.077 0.923 37 H 0.086 0.914 38 H 0.056 0.944 39 H 0.093 0.907 40 H 0.418 0.582 41 H 0.061 0.939 42 H 0.087 0.913 43 H 0.062 0.938 44 H 0.071 0.929 45 H 0.098 0.902 46 H 0.069 0.931 47 H 0.062 0.938 48 H 0.086 0.914 49 H 0.063 0.937 50 H 0.114 0.886 51 H 0.095 0.905 52 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.487 -1.843 -1.742 6.965 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C -0.031 4.031 3 C -0.113 4.113 4 Cl -0.039 7.039 5 C -0.092 4.092 6 C -0.156 4.156 7 C -0.174 4.174 8 O -0.350 6.350 9 Si 0.664 3.336 10 C 0.112 3.888 11 O -0.226 6.226 12 C -0.011 4.011 13 C -0.119 4.119 14 H 0.120 0.880 15 C -0.185 4.185 16 C 0.030 3.970 17 H 0.120 0.880 18 N -0.348 5.348 19 C 0.395 3.605 20 O -0.487 6.487 21 O -0.284 6.284 22 C 0.091 3.909 23 C -0.238 4.238 24 C -0.194 4.194 25 C -0.237 4.237 26 C -0.153 4.153 27 C -0.219 4.219 28 H 0.103 0.897 29 H 0.093 0.907 30 H 0.108 0.892 31 H 0.166 0.834 32 H 0.135 0.865 33 H 0.231 0.769 34 H -0.202 1.202 35 H -0.226 1.226 36 H 0.095 0.905 37 H 0.104 0.896 38 H 0.075 0.925 39 H 0.111 0.889 40 H 0.256 0.744 41 H 0.080 0.920 42 H 0.105 0.895 43 H 0.081 0.919 44 H 0.090 0.910 45 H 0.117 0.883 46 H 0.088 0.912 47 H 0.081 0.919 48 H 0.105 0.895 49 H 0.082 0.918 50 H 0.132 0.868 51 H 0.114 0.886 52 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -5.043 -1.695 -1.884 5.643 hybrid contribution -0.279 0.081 1.407 1.437 sum -5.322 -1.614 -0.477 5.582 Atomic orbital electron populations 1.20994 0.88610 1.04581 1.03847 1.19852 0.97787 0.90507 0.94922 1.20701 0.92144 0.87380 1.11104 1.98369 1.76545 1.31885 1.97138 1.20923 0.92437 0.98046 0.97786 1.19509 0.96559 0.90477 1.09043 1.24965 0.90939 1.13606 0.87927 1.86625 1.75848 1.55400 1.17135 0.94172 0.77389 0.72836 0.89231 1.18922 0.90486 0.85928 0.93474 1.86165 1.36417 1.12519 1.87489 1.23072 0.93890 0.81039 1.03061 1.22253 0.99440 0.92320 0.97869 0.87975 1.23594 1.02340 0.95088 0.97518 1.22562 0.98162 0.87452 0.88835 0.87967 1.44752 1.13190 1.34257 1.42572 1.18463 0.84090 0.79417 0.78482 1.90906 1.15850 1.73741 1.68191 1.86309 1.43649 1.45939 1.52505 1.22346 0.89793 0.86265 0.92500 1.22474 0.98723 1.01899 1.00674 1.21889 1.00730 0.99245 0.97575 1.22473 1.01923 0.99850 0.99457 1.23333 0.99458 0.92814 0.99723 1.21332 0.92289 0.99445 1.08793 0.89672 0.90670 0.89181 0.83413 0.86485 0.76905 1.20153 1.22627 0.90508 0.89551 0.92462 0.88855 0.74427 0.92028 0.89464 0.91945 0.91039 0.88347 0.91213 0.91857 0.89503 0.91791 0.86761 0.88634 0.82138 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.54 9.61 71.23 0.68 1.23 16 2 C -0.03 0.02 5.88 -19.86 -0.12 -0.10 16 3 C -0.09 -0.14 6.31 22.33 0.14 0.01 16 4 Cl -0.07 -0.13 27.29 -2.72 -0.07 -0.20 16 5 C -0.07 -0.08 8.44 22.28 0.19 0.10 16 6 C -0.15 -0.27 5.27 -19.77 -0.10 -0.38 16 7 C -0.07 -0.13 2.37 71.23 0.17 0.04 16 8 O -0.54 -2.86 12.88 -148.98 -1.92 -4.78 16 9 Si 0.76 -0.03 30.25 68.60 2.08 2.05 16 10 C 0.16 0.22 6.66 22.50 0.15 0.37 16 11 O -0.31 -0.46 9.47 -92.66 -0.88 -1.34 16 12 C 0.06 -0.34 4.58 71.98 0.33 -0.01 16 13 C -0.10 0.50 4.01 -10.27 -0.04 0.46 16 14 H 0.10 -0.33 8.14 -2.39 -0.02 -0.35 16 15 C -0.15 0.21 7.43 31.12 0.23 0.45 16 16 C 0.13 -0.23 4.24 45.52 0.19 -0.03 16 17 H 0.10 0.27 7.46 -2.39 -0.02 0.26 16 18 N -0.69 0.21 5.36 -567.62 -3.04 -2.84 16 19 C 0.64 4.41 8.06 129.79 1.05 5.46 16 20 O -0.60 -7.62 11.48 19.82 0.23 -7.39 16 21 O -0.37 -2.06 9.94 -55.46 -0.55 -2.61 16 22 C 0.13 0.42 1.13 -10.79 -0.01 0.41 16 23 C -0.18 -0.74 8.37 71.98 0.60 -0.14 16 24 C -0.14 0.27 8.85 71.98 0.64 0.91 16 25 C -0.18 -0.63 8.37 71.98 0.60 -0.03 16 26 C -0.12 0.95 7.39 31.12 0.23 1.18 16 27 C -0.20 0.37 8.69 22.36 0.19 0.56 16 28 H 0.08 -0.44 8.14 -2.39 -0.02 -0.46 16 29 H 0.07 -0.24 6.90 -2.39 -0.02 -0.26 16 30 H 0.09 -0.69 8.09 -2.39 -0.02 -0.71 16 31 H 0.15 -0.10 4.86 -2.91 -0.01 -0.11 16 32 H 0.12 0.25 7.83 -2.39 -0.02 0.23 16 33 H 0.38 -0.19 8.70 -74.05 -0.64 -0.84 16 34 H -0.28 -0.73 6.68 99.48 0.66 -0.07 16 35 H -0.30 -2.20 7.11 99.48 0.71 -1.49 16 36 H 0.08 -0.58 7.36 -2.39 -0.02 -0.59 16 37 H 0.09 -0.76 7.66 -2.39 -0.02 -0.78 16 38 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 39 H 0.09 -0.24 7.89 -2.39 -0.02 -0.26 16 40 H 0.42 -2.36 8.84 -92.71 -0.82 -3.18 16 41 H 0.06 0.21 8.14 -2.38 -0.02 0.19 16 42 H 0.09 0.05 8.14 -2.38 -0.02 0.03 16 43 H 0.06 0.61 5.88 -2.39 -0.01 0.59 16 44 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 45 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 46 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 47 H 0.06 0.57 5.88 -2.39 -0.01 0.55 16 48 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 49 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 50 H 0.11 -1.40 8.08 -2.39 -0.02 -1.42 16 51 H 0.10 -0.88 8.14 -2.39 -0.02 -0.90 16 52 H 0.16 -1.15 6.30 -2.91 -0.02 -1.16 16 Total: 0.00 -18.39 427.42 0.45 -17.94 By element: Atomic # 1 Polarization: -10.80 SS G_CDS: -0.51 Total: -11.31 kcal Atomic # 6 Polarization: 5.35 SS G_CDS: 5.12 Total: 10.48 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -3.04 Total: -2.84 kcal Atomic # 8 Polarization: -12.99 SS G_CDS: -3.12 Total: -16.11 kcal Atomic # 14 Polarization: -0.03 SS G_CDS: 2.08 Total: 2.05 kcal Atomic # 17 Polarization: -0.13 SS G_CDS: -0.07 Total: -0.20 kcal Total: -18.39 0.45 -17.94 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_12058104_15734236.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.279 kcal (2) G-P(sol) polarization free energy of solvation -18.393 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.672 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.451 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.941 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.221 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds