Wall clock time and date at job start Tue Mar 9 2021 13:32:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53009 * 1 3 3 C 1.52990 * 109.46976 * 2 1 4 4 C 1.52994 * 109.47011 * 239.99734 * 2 1 3 5 5 O 1.45201 * 109.46533 * 119.99737 * 2 1 3 6 6 C 1.34642 * 117.00026 * 60.00460 * 5 2 1 7 7 O 1.21514 * 120.00025 * 359.97438 * 6 5 2 8 8 N 1.34776 * 119.99648 * 179.97438 * 6 5 2 9 9 C 1.46504 * 119.99365 * 179.97438 * 8 6 5 10 10 H 1.08995 * 112.85116 * 336.19274 * 9 8 6 11 11 C 1.53951 * 113.61463 * 107.47060 * 9 8 6 12 12 C 1.53782 * 87.02036 * 89.19465 * 11 9 8 13 13 H 1.09000 * 113.61395 * 270.77162 * 12 11 9 14 14 C 1.53002 * 113.61212 * 139.95699 * 12 11 9 15 15 O 1.42894 * 109.47672 * 85.86368 * 14 12 11 16 16 C 1.35943 * 117.00446 * 179.97438 * 15 14 12 17 17 C 1.38689 * 120.03291 * 180.27098 * 16 15 14 18 18 C 1.50693 * 120.01463 * 0.02562 * 17 16 15 19 19 O 1.42907 * 109.47148 * 285.27707 * 18 17 16 20 20 Si 1.86303 * 109.47226 * 165.28048 * 18 17 16 21 21 C 1.38169 * 119.96907 * 180.30374 * 17 16 15 22 22 C 1.38433 * 120.02933 * 359.44293 * 21 17 16 23 23 F 1.35100 * 119.97138 * 180.27955 * 22 21 17 24 24 C 1.38472 * 120.06291 * 0.25790 * 22 21 17 25 25 C 1.38135 * 120.03078 * 0.02562 * 24 22 21 26 26 C 1.53779 * 87.17437 * 25.36296 * 12 11 9 27 27 H 1.08995 * 109.46951 * 300.00464 * 1 2 3 28 28 H 1.09002 * 109.46812 * 60.00445 * 1 2 3 29 29 H 1.09000 * 109.47089 * 179.97438 * 1 2 3 30 30 H 1.09009 * 109.46972 * 179.97438 * 3 2 1 31 31 H 1.09004 * 109.47702 * 299.99619 * 3 2 1 32 32 H 1.08995 * 109.47659 * 59.99970 * 3 2 1 33 33 H 1.09009 * 109.47624 * 300.00086 * 4 2 1 34 34 H 1.09002 * 109.47479 * 60.00230 * 4 2 1 35 35 H 1.09007 * 109.47193 * 180.02562 * 4 2 1 36 36 H 0.96999 * 120.00598 * 359.97438 * 8 6 5 37 37 H 1.09005 * 113.66377 * 334.67028 * 11 9 8 38 38 H 1.08996 * 113.61886 * 203.71594 * 11 9 8 39 39 H 1.09003 * 109.47073 * 325.85550 * 14 12 11 40 40 H 1.08998 * 109.46713 * 205.86533 * 14 12 11 41 41 H 1.09001 * 109.47424 * 45.27641 * 18 17 16 42 42 H 0.96696 * 114.00258 * 60.00365 * 19 18 17 43 43 H 1.48500 * 110.00042 * 178.68397 * 20 18 17 44 44 H 1.48501 * 109.99759 * 300.00062 * 20 18 17 45 45 H 1.08002 * 119.98795 * 179.72829 * 21 17 16 46 46 H 1.08002 * 119.99237 * 179.97438 * 24 22 21 47 47 H 1.07999 * 120.01606 * 179.97438 * 25 24 22 48 48 H 1.09000 * 113.61434 * 89.15139 * 26 12 11 49 49 H 1.08997 * 113.61405 * 220.06340 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3384 7 8 0.9509 -2.5095 0.5040 8 7 2.0679 -2.6656 2.4168 9 6 1.6738 -4.0668 2.5832 10 1 0.7590 -4.3159 2.0455 11 6 2.8225 -5.0632 2.3434 12 6 3.1492 -4.9232 3.8396 13 1 3.8473 -4.1157 4.0605 14 6 3.5372 -6.2435 4.5084 15 8 4.9358 -6.4753 4.3294 16 6 5.4466 -7.6143 4.8677 17 6 6.7976 -7.8990 4.7363 18 6 7.7005 -6.9454 3.9970 19 8 7.4683 -7.0621 2.5918 20 14 9.4785 -7.3591 4.3690 21 6 7.3142 -9.0601 5.2785 22 6 6.4862 -9.9334 5.9626 23 9 6.9937 -11.0656 6.4972 24 6 5.1383 -9.6474 6.1000 25 6 4.6180 -8.4902 5.5538 26 6 1.6752 -4.5373 4.0474 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8901 29 1 -0.3633 -1.0277 -0.0005 30 1 3.1301 1.4424 0.0005 31 1 1.6768 1.9563 -0.8900 32 1 1.6767 1.9563 0.8899 33 1 1.6767 -1.7490 -1.2492 34 1 1.6768 -0.2075 -2.1392 35 1 3.1301 -0.7217 -1.2490 36 1 2.6280 -2.2370 3.0827 37 1 3.6046 -4.6798 1.6881 38 1 2.4841 -6.0603 2.0619 39 1 2.9729 -7.0593 4.0565 40 1 3.3109 -6.1916 5.5733 41 1 7.4904 -5.9246 4.3164 42 1 6.5609 -6.8607 2.3250 43 1 10.3796 -6.4461 3.6210 44 1 9.7329 -7.2415 5.8273 45 1 8.3654 -9.2842 5.1725 46 1 4.4933 -10.3297 6.6336 47 1 3.5666 -8.2676 5.6607 48 1 1.0224 -5.3903 4.2324 49 1 1.5323 -3.7299 4.7656 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_12398896_15734082.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:32:12 Heat of formation + Delta-G solvation = -145.500622 kcal Electronic energy + Delta-G solvation = -31580.963645 eV Core-core repulsion = 27004.568236 eV Total energy + Delta-G solvation = -4576.395409 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.172 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -49.79963 -41.97650 -41.55927 -40.48151 -38.60434 -37.73291 -37.40454 -35.29860 -34.13565 -32.95371 -31.00797 -29.35345 -28.34493 -28.30373 -27.00760 -26.87823 -25.14843 -23.74333 -22.96425 -22.67751 -21.13267 -20.47951 -19.45922 -19.24069 -18.59903 -18.20410 -17.67403 -17.54487 -17.24903 -17.08118 -16.70515 -16.43249 -16.20221 -15.94815 -15.77892 -15.42828 -15.32490 -15.28121 -15.07817 -14.65729 -14.38130 -14.21378 -14.11933 -13.91075 -13.70168 -13.46724 -13.38704 -13.26086 -13.04971 -12.87245 -12.84522 -12.70374 -12.46953 -12.28697 -12.17554 -12.11561 -11.98388 -11.84186 -11.44320 -11.31882 -11.28847 -11.13309 -11.00253 -10.25543 -10.24249 -9.21624 -4.88498 -0.07629 0.06188 1.11338 1.38525 1.64962 1.81648 1.87617 2.00603 2.34795 3.04723 3.15111 3.16096 3.24106 3.40607 3.51177 3.55911 3.60911 3.75800 3.81489 3.84203 3.91792 3.93254 3.95380 3.99593 4.11917 4.16043 4.24580 4.40185 4.45856 4.46071 4.49659 4.55027 4.60751 4.61531 4.70560 4.76606 4.78781 4.83420 4.85673 4.91511 4.92790 4.93320 4.97292 5.05398 5.07461 5.29417 5.34865 5.44923 5.54280 5.57513 6.13111 6.35241 6.56398 7.38127 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.653 3.347 7 O -0.564 6.564 8 N -0.696 5.696 9 C 0.138 3.862 10 H 0.112 0.888 11 C -0.146 4.146 12 C -0.112 4.112 13 H 0.103 0.897 14 C 0.067 3.933 15 O -0.310 6.310 16 C 0.131 3.869 17 C -0.118 4.118 18 C -0.069 4.069 19 O -0.533 6.533 20 Si 0.740 3.260 21 C -0.105 4.105 22 C 0.070 3.930 23 F -0.135 7.135 24 C -0.108 4.108 25 C -0.177 4.177 26 C -0.135 4.135 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.083 0.917 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.407 0.593 37 H 0.078 0.922 38 H 0.097 0.903 39 H 0.070 0.930 40 H 0.067 0.933 41 H 0.077 0.923 42 H 0.367 0.633 43 H -0.253 1.253 44 H -0.249 1.249 45 H 0.148 0.852 46 H 0.142 0.858 47 H 0.140 0.860 48 H 0.103 0.897 49 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.276 0.904 1.823 3.053 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.101 3.899 3 C -0.199 4.199 4 C -0.242 4.242 5 O -0.280 6.280 6 C 0.407 3.593 7 O -0.452 6.452 8 N -0.354 5.354 9 C 0.033 3.967 10 H 0.130 0.870 11 C -0.184 4.184 12 C -0.130 4.130 13 H 0.121 0.879 14 C -0.008 4.008 15 O -0.224 6.224 16 C 0.085 3.915 17 C -0.119 4.119 18 C -0.178 4.178 19 O -0.338 6.338 20 Si 0.638 3.362 21 C -0.124 4.124 22 C 0.051 3.949 23 F -0.114 7.114 24 C -0.127 4.127 25 C -0.196 4.196 26 C -0.173 4.173 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.242 0.758 37 H 0.097 0.903 38 H 0.115 0.885 39 H 0.088 0.912 40 H 0.085 0.915 41 H 0.095 0.905 42 H 0.215 0.785 43 H -0.177 1.177 44 H -0.174 1.174 45 H 0.166 0.834 46 H 0.160 0.840 47 H 0.158 0.842 48 H 0.122 0.878 49 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -1.156 0.979 1.574 2.185 hybrid contribution -1.363 0.896 0.691 1.772 sum -2.520 1.876 2.264 3.872 Atomic orbital electron populations 1.22527 0.93805 1.05053 1.02750 1.22130 0.94463 0.91555 0.81801 1.21882 1.02361 0.92329 1.03366 1.22526 1.01642 1.03451 0.96537 1.86308 1.71471 1.23359 1.46817 1.18059 0.78600 0.80591 0.82067 1.90924 1.40841 1.70512 1.42932 1.44350 1.55494 1.11655 1.23940 1.21779 0.99114 0.78640 0.97152 0.87040 1.23593 0.98855 1.00260 0.95741 1.22676 0.97096 0.96651 0.96581 0.87915 1.22941 0.79194 0.97806 1.00840 1.86050 1.25932 1.37652 1.72750 1.18772 0.92144 0.86462 0.94072 1.19508 0.92174 0.97326 1.02927 1.25325 1.10799 0.98309 0.83329 1.86742 1.34435 1.92707 1.19931 0.92961 0.72674 0.90693 0.79865 1.20812 1.00194 0.93136 0.98235 1.17462 0.92277 0.85089 1.00071 1.91535 1.87537 1.48120 1.84179 1.21025 0.93704 0.97828 1.00155 1.21135 1.00529 0.95575 1.02361 1.23364 0.95359 1.02244 0.96364 0.92112 0.90882 0.89425 0.91381 0.89873 0.91394 0.89412 0.90876 0.92097 0.75832 0.90301 0.88462 0.91222 0.91472 0.90531 0.78520 1.17714 1.17390 0.83443 0.83997 0.84184 0.87813 0.89863 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.21 8.37 37.16 0.31 0.11 16 2 C 0.14 0.16 1.13 -90.62 -0.10 0.06 16 3 C -0.14 0.11 8.85 37.15 0.33 0.44 16 4 C -0.18 -0.23 8.37 37.15 0.31 0.08 16 5 O -0.36 -0.80 9.94 -40.33 -0.40 -1.20 16 6 C 0.65 1.55 8.06 54.05 0.44 1.98 16 7 O -0.56 -2.63 11.48 -19.28 -0.22 -2.85 16 8 N -0.70 0.51 5.27 -57.84 -0.30 0.21 16 9 C 0.14 -0.27 4.33 -67.02 -0.29 -0.56 16 10 H 0.11 -0.06 7.46 -51.93 -0.39 -0.45 16 11 C -0.15 0.37 7.44 -25.83 -0.19 0.18 16 12 C -0.11 0.40 3.88 -89.81 -0.35 0.05 16 13 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 14 C 0.07 -0.22 4.57 37.16 0.17 -0.05 16 15 O -0.31 0.22 9.01 -19.56 -0.18 0.04 16 16 C 0.13 0.02 6.61 -39.23 -0.26 -0.24 16 17 C -0.12 -0.10 5.28 -104.48 -0.55 -0.65 16 18 C -0.07 -0.06 2.33 36.00 0.08 0.02 16 19 O -0.53 -0.89 12.65 -35.23 -0.45 -1.33 16 20 Si 0.74 0.23 30.17 -169.99 -5.13 -4.90 16 21 C -0.11 -0.07 8.63 -39.53 -0.34 -0.41 16 22 C 0.07 0.08 7.30 -39.42 -0.29 -0.21 16 23 F -0.14 -0.30 17.27 2.25 0.04 -0.26 16 24 C -0.11 0.03 10.02 -39.53 -0.40 -0.36 16 25 C -0.18 0.17 9.04 -39.44 -0.36 -0.19 16 26 C -0.14 0.57 7.39 -25.92 -0.19 0.38 16 27 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 28 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 29 H 0.09 0.27 5.88 -51.93 -0.31 -0.03 16 30 H 0.07 -0.05 8.14 -51.92 -0.42 -0.48 16 31 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 32 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.09 0.29 5.88 -51.92 -0.31 -0.02 16 34 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 36 H 0.41 -1.03 8.81 -40.82 -0.36 -1.39 16 37 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 38 H 0.10 -0.30 7.92 -51.93 -0.41 -0.71 16 39 H 0.07 -0.29 7.40 -51.93 -0.38 -0.67 16 40 H 0.07 -0.26 7.66 -51.93 -0.40 -0.66 16 41 H 0.08 0.07 7.83 -51.93 -0.41 -0.33 16 42 H 0.37 -0.11 8.57 45.56 0.39 0.28 16 43 H -0.25 -0.78 7.11 56.52 0.40 -0.37 16 44 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 45 H 0.15 -0.18 5.13 -52.49 -0.27 -0.45 16 46 H 0.14 -0.30 8.06 -52.49 -0.42 -0.72 16 47 H 0.14 -0.46 6.30 -52.49 -0.33 -0.79 16 48 H 0.10 -0.55 8.10 -51.93 -0.42 -0.97 16 49 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 LS Contribution 398.02 15.07 6.00 6.00 Total: 0.00 -6.40 398.02 -9.75 -16.15 By element: Atomic # 1 Polarization: -5.05 SS G_CDS: -7.44 Total: -12.49 kcal Atomic # 6 Polarization: 2.31 SS G_CDS: -1.68 Total: 0.63 kcal Atomic # 7 Polarization: 0.51 SS G_CDS: -0.30 Total: 0.21 kcal Atomic # 8 Polarization: -4.10 SS G_CDS: -1.24 Total: -5.35 kcal Atomic # 9 Polarization: -0.30 SS G_CDS: 0.04 Total: -0.26 kcal Atomic # 14 Polarization: 0.23 SS G_CDS: -5.13 Total: -4.90 kcal Total LS contribution 6.00 Total: 6.00 kcal Total: -6.40 -9.75 -16.15 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_12398896_15734082.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -129.349 kcal (2) G-P(sol) polarization free energy of solvation -6.398 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.747 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.754 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.151 kcal (6) G-S(sol) free energy of system = (1) + (5) -145.501 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds