Wall clock time and date at job start Tue Mar 9 2021 13:41:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50709 * 1 3 3 C 1.38123 * 119.96782 * 2 1 4 4 C 1.38753 * 119.94084 * 180.02562 * 3 2 1 5 5 O 1.35905 * 120.05253 * 180.02562 * 4 3 2 6 6 C 1.42898 * 117.00161 * 359.97438 * 5 4 3 7 7 C 1.52999 * 109.47028 * 180.02562 * 6 5 4 8 8 H 1.09005 * 112.84599 * 316.19538 * 7 6 5 9 9 C 1.53786 * 113.61758 * 87.49995 * 7 6 5 10 10 C 1.53783 * 87.08046 * 139.98207 * 9 7 6 11 11 H 1.08995 * 113.61357 * 89.11339 * 10 9 7 12 12 O 1.42904 * 113.61314 * 220.02345 * 10 9 7 13 13 C 1.42901 * 113.99416 * 247.49859 * 12 10 9 14 14 C 1.52995 * 109.47568 * 59.99900 * 13 12 10 15 15 C 1.53003 * 109.46778 * 180.02562 * 13 12 10 16 16 C 1.53000 * 109.46989 * 299.99571 * 13 12 10 17 17 C 1.53774 * 113.61454 * 185.00091 * 7 6 5 18 18 C 1.38706 * 119.89217 * 359.97438 * 4 3 2 19 19 C 1.50699 * 120.03108 * 179.97438 * 18 4 3 20 20 O 1.42898 * 109.46964 * 285.00028 * 19 18 4 21 21 Si 1.86301 * 109.47146 * 164.99946 * 19 18 4 22 22 C 1.38170 * 119.93941 * 0.25332 * 18 4 3 23 23 C 1.38246 * 120.05914 * 359.47206 * 22 18 4 24 24 H 1.08997 * 109.46935 * 90.00135 * 1 2 3 25 25 H 1.08999 * 109.46330 * 210.00418 * 1 2 3 26 26 H 1.09000 * 109.47209 * 329.99472 * 1 2 3 27 27 H 1.08002 * 120.02924 * 359.97438 * 3 2 1 28 28 H 1.08998 * 109.46808 * 299.99655 * 6 5 4 29 29 H 1.08995 * 109.47282 * 60.00138 * 6 5 4 30 30 H 1.08997 * 113.61436 * 254.52901 * 9 7 6 31 31 H 1.08995 * 113.60705 * 25.43462 * 9 7 6 32 32 H 1.09000 * 109.46799 * 59.99378 * 14 13 12 33 33 H 1.08998 * 109.47374 * 179.97438 * 14 13 12 34 34 H 1.09000 * 109.46993 * 300.00259 * 14 13 12 35 35 H 1.09002 * 109.47210 * 59.99816 * 15 13 12 36 36 H 1.08998 * 109.47221 * 180.02562 * 15 13 12 37 37 H 1.09000 * 109.46801 * 300.00140 * 15 13 12 38 38 H 1.09002 * 109.47282 * 60.00278 * 16 13 12 39 39 H 1.09003 * 109.47210 * 180.02562 * 16 13 12 40 40 H 1.09002 * 109.47410 * 300.00435 * 16 13 12 41 41 H 1.09005 * 113.61667 * 334.56457 * 17 7 6 42 42 H 1.09003 * 113.61989 * 105.46685 * 17 7 6 43 43 H 1.09002 * 109.46959 * 44.99998 * 19 18 4 44 44 H 0.96698 * 113.99898 * 299.99550 * 20 19 18 45 45 H 1.48503 * 110.00152 * 180.02562 * 21 19 18 46 46 H 1.48498 * 110.00118 * 301.32243 * 21 19 18 47 47 H 1.08010 * 119.96909 * 179.74525 * 22 18 4 48 48 H 1.07995 * 119.94348 * 180.25354 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1970 1.1966 0.0000 4 6 3.5846 1.1959 -0.0005 5 8 4.2657 2.3719 0.0000 6 6 3.4891 3.5715 0.0005 7 6 4.4229 4.7835 0.0004 8 1 5.2557 4.6762 0.6954 9 6 4.8470 5.2343 -1.4074 10 6 4.6854 6.6797 -0.9076 11 1 5.5909 7.0913 -0.4618 12 8 4.0911 7.5546 -1.8686 13 6 4.9768 8.5600 -2.3652 14 6 6.1764 7.8940 -3.0421 15 6 4.2380 9.4341 -3.3806 16 6 5.4640 9.4291 -1.2040 17 6 3.6870 6.1281 0.1238 18 6 4.2753 -0.0069 -0.0005 19 6 5.7822 -0.0113 -0.0017 20 8 6.2585 0.3354 -1.3036 21 14 6.3987 -1.7095 0.4532 22 6 3.5803 -1.2012 -0.0053 23 6 2.1979 -1.1979 0.0010 24 1 -0.3633 0.0000 -1.0276 25 1 -0.3632 -0.8900 0.5139 26 1 -0.3633 0.8899 0.5139 27 1 1.6570 2.1319 -0.0004 28 1 2.8604 3.5976 -0.8895 29 1 2.8604 3.5969 0.8905 30 1 5.8746 4.9717 -1.6589 31 1 4.1360 4.9597 -2.1864 32 1 5.8292 7.2748 -3.8692 33 1 6.8517 8.6610 -3.4212 34 1 6.7025 7.2716 -2.3183 35 1 3.3836 9.9087 -2.8980 36 1 4.9136 10.2008 -3.7598 37 1 3.8904 8.8152 -4.2078 38 1 5.9902 8.8067 -0.4802 39 1 6.1393 10.1963 -1.5828 40 1 4.6094 9.9036 -0.7218 41 1 2.6587 6.0978 -0.2368 42 1 3.7779 6.5870 1.1083 43 1 6.1482 0.7146 0.7244 44 1 5.9709 -0.2690 -2.0015 45 1 7.8836 -1.7269 0.4562 46 1 5.8840 -2.0950 1.7917 47 1 4.1177 -2.1381 -0.0095 48 1 1.6566 -2.1324 0.0014 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_12861320_14598384.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:41:41 Heat of formation + Delta-G solvation = -76.245157 kcal Electronic energy + Delta-G solvation = -25867.502482 eV Core-core repulsion = 22275.898434 eV Total energy + Delta-G solvation = -3591.604047 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.187 amu Computer time = 2.72 seconds Orbital eigenvalues (eV) -41.49092 -40.77673 -39.00122 -37.87880 -37.56222 -33.99575 -33.75655 -31.17117 -29.54737 -29.04707 -28.39540 -28.27023 -26.62716 -25.17497 -24.38628 -22.82107 -22.02753 -20.81509 -20.53417 -18.79512 -18.09866 -17.65152 -17.06267 -16.95379 -16.57821 -16.44742 -15.95071 -15.63259 -15.54930 -15.25831 -14.84400 -14.64884 -14.58540 -14.34996 -14.27494 -13.94965 -13.45118 -13.43012 -13.32911 -13.25935 -13.19007 -12.94264 -12.81616 -12.70173 -12.62497 -12.41594 -12.31740 -12.05089 -11.99506 -11.82190 -11.71322 -11.58817 -11.34748 -11.17076 -10.33590 -10.25806 -9.77081 -9.06463 -4.97616 0.24910 0.48489 1.38638 1.71306 2.05174 2.16285 2.69532 2.74905 3.45989 3.55504 3.59687 3.72393 3.75675 3.80313 3.85419 3.88944 3.95761 3.97899 4.07247 4.11732 4.13263 4.25717 4.34053 4.38633 4.49657 4.52654 4.56124 4.61478 4.64341 4.65218 4.73860 4.74580 4.76049 4.79256 4.81908 4.86540 4.88451 4.91473 5.03081 5.10065 5.13271 5.16772 5.29454 5.31172 5.32027 5.36550 5.38426 5.61060 5.81523 6.41652 6.48606 6.73487 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.039 4.039 3 C -0.213 4.213 4 C 0.161 3.839 5 O -0.301 6.301 6 C 0.071 3.929 7 C -0.109 4.109 8 H 0.103 0.897 9 C -0.145 4.145 10 C 0.062 3.938 11 H 0.092 0.908 12 O -0.361 6.361 13 C 0.105 3.895 14 C -0.177 4.177 15 C -0.139 4.139 16 C -0.179 4.179 17 C -0.127 4.127 18 C -0.163 4.163 19 C -0.053 4.053 20 O -0.536 6.536 21 Si 0.680 3.320 22 C -0.072 4.072 23 C -0.156 4.156 24 H 0.075 0.925 25 H 0.071 0.929 26 H 0.067 0.933 27 H 0.129 0.871 28 H 0.065 0.935 29 H 0.063 0.937 30 H 0.073 0.927 31 H 0.090 0.910 32 H 0.065 0.935 33 H 0.066 0.934 34 H 0.058 0.942 35 H 0.063 0.937 36 H 0.070 0.930 37 H 0.063 0.937 38 H 0.059 0.941 39 H 0.067 0.933 40 H 0.065 0.935 41 H 0.093 0.907 42 H 0.077 0.923 43 H 0.111 0.889 44 H 0.374 0.626 45 H -0.255 1.255 46 H -0.257 1.257 47 H 0.134 0.866 48 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.050 -0.516 -0.952 2.319 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.039 4.039 3 C -0.232 4.232 4 C 0.114 3.886 5 O -0.214 6.214 6 C -0.004 4.004 7 C -0.127 4.127 8 H 0.121 0.879 9 C -0.183 4.183 10 C 0.004 3.996 11 H 0.110 0.890 12 O -0.281 6.281 13 C 0.066 3.934 14 C -0.234 4.234 15 C -0.196 4.196 16 C -0.237 4.237 17 C -0.164 4.164 18 C -0.164 4.164 19 C -0.163 4.163 20 O -0.340 6.340 21 Si 0.582 3.418 22 C -0.089 4.089 23 C -0.174 4.174 24 H 0.094 0.906 25 H 0.090 0.910 26 H 0.086 0.914 27 H 0.146 0.854 28 H 0.084 0.916 29 H 0.081 0.919 30 H 0.091 0.909 31 H 0.109 0.891 32 H 0.084 0.916 33 H 0.085 0.915 34 H 0.077 0.923 35 H 0.082 0.918 36 H 0.089 0.911 37 H 0.082 0.918 38 H 0.078 0.922 39 H 0.086 0.914 40 H 0.084 0.916 41 H 0.112 0.888 42 H 0.095 0.905 43 H 0.128 0.872 44 H 0.221 0.779 45 H -0.180 1.180 46 H -0.182 1.182 47 H 0.151 0.849 48 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -1.282 -0.461 -0.106 1.366 hybrid contribution -0.173 0.685 0.348 0.787 sum -1.454 0.224 0.242 1.491 Atomic orbital electron populations 1.20864 0.90730 1.03174 1.02805 1.19781 0.96202 0.92426 0.95517 1.21179 0.92811 0.99125 1.10045 1.18732 0.89985 0.85700 0.94144 1.86148 1.35466 1.11975 1.87812 1.22820 0.93856 0.82240 1.01463 1.22295 0.99225 0.91913 0.99280 0.87910 1.23590 1.02724 0.95513 0.96458 1.23577 0.96719 0.89126 0.90188 0.89033 1.88032 1.37912 1.43696 1.58412 1.21537 0.90188 0.88103 0.93593 1.22470 0.98013 1.01383 1.01538 1.21770 1.00733 0.98892 0.98208 1.22474 1.02086 1.00412 0.98687 1.23232 1.00012 0.93898 0.99296 1.19667 0.96470 0.90961 1.09280 1.24856 0.91286 1.11154 0.89051 1.86543 1.75168 1.56210 1.16112 0.95115 0.80856 0.80268 0.85559 1.20797 0.94385 0.95965 0.97766 1.20916 0.93739 0.97828 1.04939 0.90610 0.91016 0.91398 0.85355 0.91640 0.91877 0.90857 0.89139 0.91638 0.91539 0.92261 0.91779 0.91066 0.91756 0.92241 0.91350 0.91624 0.88840 0.90466 0.87201 0.77917 1.17980 1.18207 0.84870 0.85359 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.14 10.01 36.01 0.36 0.50 16 2 C -0.04 -0.03 5.88 -104.64 -0.62 -0.65 16 3 C -0.21 -0.35 8.69 -39.43 -0.34 -0.69 16 4 C 0.16 0.46 6.66 -39.22 -0.26 0.20 16 5 O -0.30 -0.97 9.47 -19.44 -0.18 -1.16 16 6 C 0.07 0.05 4.58 37.16 0.17 0.22 16 7 C -0.11 -0.02 4.01 -89.81 -0.36 -0.38 16 8 H 0.10 0.04 8.14 -51.93 -0.42 -0.39 16 9 C -0.15 -0.12 7.46 -25.91 -0.19 -0.31 16 10 C 0.06 0.03 2.82 -25.91 -0.07 -0.04 16 11 H 0.09 -0.01 5.55 -51.93 -0.29 -0.30 16 12 O -0.36 -0.77 10.00 -35.23 -0.35 -1.12 16 13 C 0.10 0.07 1.11 -90.62 -0.10 -0.04 16 14 C -0.18 -0.02 8.39 37.15 0.31 0.30 16 15 C -0.14 -0.01 8.84 37.16 0.33 0.32 16 16 C -0.18 0.05 8.38 37.16 0.31 0.36 16 17 C -0.13 0.04 7.47 -25.92 -0.19 -0.16 16 18 C -0.16 -0.33 5.27 -104.47 -0.55 -0.88 16 19 C -0.05 -0.10 2.38 36.01 0.09 -0.01 16 20 O -0.54 -1.21 12.88 -35.23 -0.45 -1.66 16 21 Si 0.68 0.10 29.92 -169.99 -5.09 -4.98 16 22 C -0.07 -0.03 8.66 -39.60 -0.34 -0.37 16 23 C -0.16 -0.05 9.70 -39.56 -0.38 -0.43 16 24 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 25 H 0.07 -0.14 8.08 -51.93 -0.42 -0.56 16 26 H 0.07 -0.11 8.08 -51.93 -0.42 -0.53 16 27 H 0.13 0.03 6.30 -52.49 -0.33 -0.30 16 28 H 0.07 0.02 7.36 -51.93 -0.38 -0.36 16 29 H 0.06 -0.01 7.66 -51.93 -0.40 -0.41 16 30 H 0.07 0.09 8.14 -51.93 -0.42 -0.34 16 31 H 0.09 0.14 7.89 -51.93 -0.41 -0.27 16 32 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 33 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.06 0.01 7.02 -51.93 -0.36 -0.36 16 35 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 36 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 38 H 0.06 -0.03 6.25 -51.93 -0.32 -0.36 16 39 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 40 H 0.06 0.01 8.14 -51.93 -0.42 -0.42 16 41 H 0.09 -0.01 8.10 -51.93 -0.42 -0.43 16 42 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 43 H 0.11 0.35 7.83 -51.93 -0.41 -0.06 16 44 H 0.37 -0.67 8.70 45.56 0.40 -0.27 16 45 H -0.25 -0.84 7.11 56.52 0.40 -0.44 16 46 H -0.26 -0.66 7.11 56.52 0.40 -0.25 16 47 H 0.13 -0.30 5.14 -52.48 -0.27 -0.57 16 48 H 0.13 -0.21 8.06 -52.49 -0.42 -0.64 16 LS Contribution 378.37 15.07 5.70 5.70 Total: 0.00 -5.70 378.37 -10.53 -16.23 By element: Atomic # 1 Polarization: -2.64 SS G_CDS: -8.31 Total: -10.95 kcal Atomic # 6 Polarization: -0.21 SS G_CDS: -1.85 Total: -2.06 kcal Atomic # 8 Polarization: -2.95 SS G_CDS: -0.99 Total: -3.94 kcal Atomic # 14 Polarization: 0.10 SS G_CDS: -5.09 Total: -4.98 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -5.70 -10.53 -16.23 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_12861320_14598384.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.015 kcal (2) G-P(sol) polarization free energy of solvation -5.697 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.713 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.533 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.230 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.245 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.72 seconds