Wall clock time and date at job start Tue Mar 9 2021 14:13:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52997 * 109.47303 * 2 1 4 4 C 1.53006 * 109.46782 * 240.00107 * 2 1 3 5 5 Si 1.86299 * 109.47078 * 120.00550 * 2 1 3 6 6 C 1.86293 * 109.47254 * 299.99671 * 5 2 1 7 7 C 1.86301 * 109.47068 * 179.97438 * 5 2 1 8 8 O 1.63108 * 109.47239 * 59.99710 * 5 2 1 9 9 C 1.42897 * 113.99834 * 179.97438 * 8 5 2 10 10 C 1.52999 * 109.46877 * 179.97438 * 9 8 5 11 11 O 1.42898 * 109.47245 * 65.00285 * 10 9 8 12 12 C 1.35954 * 117.00481 * 180.02562 * 11 10 9 13 13 C 1.38783 * 120.06477 * 89.99552 * 12 11 10 14 14 Cl 1.73600 * 120.03260 * 0.02562 * 13 12 11 15 15 C 1.38261 * 119.93597 * 180.02562 * 13 12 11 16 16 C 1.38259 * 120.06294 * 0.02562 * 15 13 12 17 17 C 1.50706 * 119.93402 * 179.97438 * 16 15 13 18 18 O 1.42903 * 109.47186 * 65.00479 * 17 16 15 19 19 Si 1.86302 * 109.46768 * 185.00158 * 17 16 15 20 20 H 1.48499 * 109.47007 * 60.00227 * 19 17 16 21 21 H 1.48496 * 109.47156 * 179.97438 * 19 17 16 22 22 H 1.48499 * 109.47188 * 300.00272 * 19 17 16 23 23 C 1.38253 * 120.12592 * 0.25942 * 16 15 13 24 24 C 1.38264 * 120.06436 * 359.44579 * 23 16 15 25 25 Cl 1.73600 * 120.03240 * 180.27464 * 24 23 16 26 26 H 1.09002 * 109.46773 * 300.00105 * 1 2 3 27 27 H 1.09002 * 109.47038 * 59.99184 * 1 2 3 28 28 H 1.08994 * 109.47628 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.46896 * 179.97438 * 3 2 1 30 30 H 1.08987 * 109.47347 * 300.00587 * 3 2 1 31 31 H 1.09006 * 109.46533 * 60.00683 * 3 2 1 32 32 H 1.08994 * 109.46988 * 300.00329 * 4 2 1 33 33 H 1.09002 * 109.46756 * 60.00536 * 4 2 1 34 34 H 1.09002 * 109.46992 * 179.97438 * 4 2 1 35 35 H 1.09000 * 109.47370 * 180.02562 * 6 5 2 36 36 H 1.09002 * 109.47265 * 300.00056 * 6 5 2 37 37 H 1.09006 * 109.47168 * 59.99863 * 6 5 2 38 38 H 1.08997 * 109.47504 * 300.00043 * 7 5 2 39 39 H 1.09002 * 109.46823 * 60.00329 * 7 5 2 40 40 H 1.09000 * 109.47224 * 179.97438 * 7 5 2 41 41 H 1.09000 * 109.46927 * 60.00360 * 9 8 5 42 42 H 1.08995 * 109.47115 * 299.99896 * 9 8 5 43 43 H 1.09001 * 109.47116 * 304.99934 * 10 9 8 44 44 H 1.09000 * 109.47405 * 185.00007 * 10 9 8 45 45 H 1.08008 * 119.96783 * 180.02562 * 15 13 12 46 46 H 1.08992 * 109.47155 * 305.00075 * 17 16 15 47 47 H 0.96698 * 113.99763 * 59.99746 * 18 17 16 48 48 H 1.08003 * 119.96815 * 179.72302 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2493 5 14 2.1510 -0.8784 1.5210 6 6 1.5301 -0.0003 3.0422 7 6 4.0140 -0.8790 1.5206 8 8 1.6073 -2.4161 1.5210 9 6 2.0294 -3.1819 2.6512 10 6 1.4634 -4.5995 2.5468 11 8 2.0308 -5.2566 1.4117 12 6 1.6302 -6.5338 1.1737 13 6 0.5279 -6.7776 0.3665 14 17 -0.3411 -5.4519 -0.3413 15 6 0.1224 -8.0775 0.1265 16 6 0.8137 -9.1339 0.6903 17 6 0.3689 -10.5496 0.4273 18 8 0.5307 -10.8497 -0.9604 19 14 1.4013 -11.7232 1.4410 20 1 1.2331 -11.4113 2.8831 21 1 0.9627 -13.1181 1.1824 22 1 2.8306 -11.5756 1.0660 23 6 1.9086 -8.8937 1.4996 24 6 2.3223 -7.5961 1.7381 25 17 3.7015 -7.2958 2.7487 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5140 -0.8899 28 1 -0.3634 -1.0276 -0.0005 29 1 3.1301 1.4424 0.0005 30 1 1.6767 1.9563 -0.8898 31 1 1.6768 1.9562 0.8901 32 1 1.6766 -1.7488 -1.2493 33 1 1.6766 -0.2073 -2.1393 34 1 3.1300 -0.7209 -1.2496 35 1 1.8938 -0.5139 3.9322 36 1 1.8935 1.0274 3.0423 37 1 0.4401 -0.0002 3.0423 38 1 4.3770 -1.3930 0.6307 39 1 4.3777 0.1485 1.5206 40 1 4.3774 -1.3926 2.4108 41 1 1.6653 -2.7121 3.5648 42 1 3.1182 -3.2258 2.6741 43 1 0.3803 -4.5510 2.4347 44 1 1.7105 -5.1569 3.4503 45 1 -0.7351 -8.2679 -0.5019 46 1 -0.6801 -10.6579 0.7026 47 1 1.4417 -10.7736 -1.2756 48 1 2.4440 -9.7206 1.9423 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_12913552_10264010.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:13:25 Heat of formation + Delta-G solvation = -157.788756 kcal Electronic energy + Delta-G solvation = -28957.815321 eV Core-core repulsion = 24802.170349 eV Total energy + Delta-G solvation = -4155.644972 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 380.094 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.42310 -39.45692 -38.07164 -37.79656 -37.42405 -36.96241 -36.80691 -32.36702 -31.94729 -30.46730 -29.36190 -29.07544 -27.84121 -27.36071 -26.64933 -24.38403 -23.86962 -22.72667 -20.40167 -19.52427 -18.68514 -18.21454 -17.62991 -17.07926 -16.89556 -16.39298 -16.22344 -15.88071 -15.78922 -15.63609 -15.17796 -14.97151 -14.86164 -14.82567 -14.59125 -14.18126 -14.03503 -13.76657 -13.55849 -13.42671 -13.40958 -13.23794 -13.15361 -12.93383 -12.89922 -12.78014 -12.63548 -12.38474 -12.31213 -12.13781 -12.07029 -12.05457 -11.90330 -11.83456 -11.67100 -11.55501 -11.28703 -11.00987 -10.62281 -10.35718 -10.05055 -9.93550 -9.81565 -0.39278 -0.26332 0.72287 0.95313 1.22319 1.30961 1.38315 1.45389 1.75394 1.79805 1.91331 2.06906 2.42000 2.48848 3.22283 3.37686 3.64346 3.79910 3.84170 3.93061 4.06593 4.10374 4.14423 4.14780 4.22238 4.31917 4.40467 4.48970 4.50808 4.63467 4.66573 4.70224 4.73553 4.74552 4.77809 4.82747 4.88526 4.93327 5.02458 5.12907 5.13892 5.15875 5.20341 5.35242 5.38574 5.44171 5.53058 5.53983 5.61782 6.22896 6.38314 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C -0.373 4.373 3 C -0.136 4.136 4 C -0.133 4.133 5 Si 1.286 2.714 6 C -0.512 4.512 7 C -0.510 4.510 8 O -0.614 6.614 9 C 0.090 3.910 10 C 0.064 3.936 11 O -0.306 6.306 12 C 0.122 3.878 13 C -0.046 4.046 14 Cl -0.030 7.030 15 C -0.065 4.065 16 C -0.103 4.103 17 C -0.078 4.078 18 O -0.533 6.533 19 Si 0.941 3.059 20 H -0.246 1.246 21 H -0.247 1.247 22 H -0.247 1.247 23 C -0.103 4.103 24 C -0.043 4.043 25 Cl -0.040 7.040 26 H 0.053 0.947 27 H 0.052 0.948 28 H 0.059 0.941 29 H 0.056 0.944 30 H 0.056 0.944 31 H 0.055 0.945 32 H 0.061 0.939 33 H 0.052 0.948 34 H 0.054 0.946 35 H 0.065 0.935 36 H 0.074 0.926 37 H 0.072 0.928 38 H 0.073 0.927 39 H 0.072 0.928 40 H 0.065 0.935 41 H 0.076 0.924 42 H 0.068 0.932 43 H 0.070 0.930 44 H 0.069 0.931 45 H 0.150 0.850 46 H 0.126 0.874 47 H 0.379 0.621 48 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.259 -1.160 2.581 2.841 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 C -0.417 4.417 3 C -0.194 4.194 4 C -0.190 4.190 5 Si 1.417 2.583 6 C -0.614 4.614 7 C -0.612 4.612 8 O -0.573 6.573 9 C 0.014 3.986 10 C -0.010 4.010 11 O -0.222 6.222 12 C 0.076 3.924 13 C -0.073 4.073 14 Cl -0.001 7.001 15 C -0.084 4.084 16 C -0.104 4.104 17 C -0.188 4.188 18 O -0.339 6.339 19 Si 0.762 3.238 20 H -0.169 1.169 21 H -0.171 1.171 22 H -0.170 1.170 23 C -0.122 4.122 24 C -0.071 4.071 25 Cl -0.011 7.011 26 H 0.072 0.928 27 H 0.071 0.929 28 H 0.078 0.922 29 H 0.075 0.925 30 H 0.075 0.925 31 H 0.074 0.926 32 H 0.080 0.920 33 H 0.071 0.929 34 H 0.073 0.927 35 H 0.085 0.915 36 H 0.093 0.907 37 H 0.091 0.909 38 H 0.092 0.908 39 H 0.091 0.909 40 H 0.085 0.915 41 H 0.094 0.906 42 H 0.086 0.914 43 H 0.088 0.912 44 H 0.087 0.913 45 H 0.168 0.832 46 H 0.143 0.857 47 H 0.227 0.773 48 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.385 -1.743 2.904 3.409 hybrid contribution 0.535 1.053 0.002 1.182 sum 0.151 -0.689 2.906 2.990 Atomic orbital electron populations 1.21502 0.93884 1.01951 1.01683 1.25765 1.00602 1.02529 1.12787 1.21554 1.00765 0.94969 1.02072 1.21501 1.00595 1.00352 0.96601 0.76754 0.63111 0.53501 0.64972 1.27052 1.06995 1.09550 1.17766 1.27025 1.25052 1.04570 1.04553 1.85416 1.78951 1.45748 1.47213 1.22032 0.99297 0.89643 0.87622 1.23014 0.98848 0.91923 0.87217 1.86168 1.66375 1.21679 1.48015 1.18106 0.92571 0.85165 0.96583 1.21330 0.94800 0.90780 1.00424 1.98429 1.74442 1.45487 1.81732 1.21009 1.00090 0.88956 0.98363 1.20257 0.95377 0.96896 0.97910 1.24986 1.08940 0.95120 0.89781 1.86552 1.33625 1.91281 1.22403 0.85795 0.79191 0.79477 0.79306 1.16909 1.17056 1.17049 1.20996 0.96914 0.95369 0.98881 1.21111 0.93565 0.93704 0.98697 1.98407 1.40145 1.96287 1.66286 0.92780 0.92869 0.92199 0.92540 0.92534 0.92590 0.91996 0.92926 0.92739 0.91537 0.90711 0.90868 0.90751 0.90864 0.91543 0.90587 0.91413 0.91169 0.91291 0.83187 0.85672 0.77340 0.84176 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.07 7.85 37.16 0.29 0.23 16 2 C -0.37 -0.07 0.53 -90.62 -0.05 -0.12 16 3 C -0.14 0.03 7.85 37.16 0.29 0.32 16 4 C -0.13 -0.12 7.85 37.16 0.29 0.17 16 5 Si 1.29 -0.93 8.45 -169.99 -1.44 -2.37 16 6 C -0.51 0.42 8.50 101.05 0.86 1.28 16 7 C -0.51 0.08 8.50 101.05 0.86 0.94 16 8 O -0.61 -0.40 8.52 -40.09 -0.34 -0.74 16 9 C 0.09 -0.07 5.51 37.16 0.20 0.13 16 10 C 0.06 0.00 6.44 37.16 0.24 0.24 16 11 O -0.31 -0.65 8.94 -24.45 -0.22 -0.87 16 12 C 0.12 0.21 5.71 -39.18 -0.22 -0.02 16 13 C -0.05 -0.06 6.33 -39.37 -0.25 -0.31 16 14 Cl -0.03 -0.06 28.50 -51.86 -1.48 -1.53 16 15 C -0.07 0.01 9.46 -39.57 -0.37 -0.36 16 16 C -0.10 0.09 5.35 -104.61 -0.56 -0.47 16 17 C -0.08 0.16 2.80 36.01 0.10 0.26 16 18 O -0.53 0.65 12.83 -35.23 -0.45 0.19 16 19 Si 0.94 -1.77 25.13 -169.99 -4.27 -6.04 16 20 H -0.25 0.34 7.11 56.52 0.40 0.74 16 21 H -0.25 0.10 7.11 56.52 0.40 0.50 16 22 H -0.25 0.41 7.05 56.52 0.40 0.81 16 23 C -0.10 0.03 8.45 -39.57 -0.33 -0.30 16 24 C -0.04 -0.04 6.33 -39.37 -0.25 -0.29 16 25 Cl -0.04 -0.04 28.50 -51.86 -1.48 -1.52 16 26 H 0.05 -0.01 7.79 -51.93 -0.40 -0.42 16 27 H 0.05 0.04 8.14 -51.93 -0.42 -0.38 16 28 H 0.06 0.05 7.97 -51.93 -0.41 -0.36 16 29 H 0.06 -0.04 7.79 -51.93 -0.40 -0.45 16 30 H 0.06 0.01 8.14 -51.94 -0.42 -0.41 16 31 H 0.06 -0.05 7.79 -51.93 -0.40 -0.46 16 32 H 0.06 0.10 7.96 -51.93 -0.41 -0.32 16 33 H 0.05 0.06 8.14 -51.93 -0.42 -0.37 16 34 H 0.05 0.02 7.79 -51.93 -0.40 -0.38 16 35 H 0.07 -0.09 7.48 -51.93 -0.39 -0.48 16 36 H 0.07 -0.07 7.79 -51.93 -0.40 -0.47 16 37 H 0.07 -0.04 7.79 -51.93 -0.40 -0.45 16 38 H 0.07 0.04 7.79 -51.93 -0.40 -0.37 16 39 H 0.07 -0.04 7.79 -51.93 -0.40 -0.44 16 40 H 0.07 -0.04 7.48 -51.93 -0.39 -0.43 16 41 H 0.08 -0.24 7.21 -51.93 -0.37 -0.61 16 42 H 0.07 -0.10 7.21 -51.93 -0.37 -0.47 16 43 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 44 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 45 H 0.15 -0.18 8.06 -52.48 -0.42 -0.61 16 46 H 0.13 -0.40 7.96 -51.93 -0.41 -0.81 16 47 H 0.38 -1.60 8.70 45.56 0.40 -1.21 16 48 H 0.14 -0.21 4.86 -52.48 -0.25 -0.47 16 LS Contribution 417.53 15.07 6.29 6.29 Total: 0.00 -4.66 417.53 -9.48 -14.15 By element: Atomic # 1 Polarization: -2.07 SS G_CDS: -7.20 Total: -9.27 kcal Atomic # 6 Polarization: 0.61 SS G_CDS: 1.10 Total: 1.71 kcal Atomic # 8 Polarization: -0.41 SS G_CDS: -1.01 Total: -1.42 kcal Atomic # 14 Polarization: -2.70 SS G_CDS: -5.71 Total: -8.41 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -2.96 Total: -3.05 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -4.66 -9.48 -14.15 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_12913552_10264010.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -143.642 kcal (2) G-P(sol) polarization free energy of solvation -4.662 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.304 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.484 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.146 kcal (6) G-S(sol) free energy of system = (1) + (5) -157.789 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds