Wall clock time and date at job start Tue Mar 9 2021 14:13:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52997 * 109.47303 * 2 1 4 4 C 1.53006 * 109.46782 * 240.00107 * 2 1 3 5 5 Si 1.86299 * 109.47078 * 120.00550 * 2 1 3 6 6 C 1.86293 * 109.47254 * 299.99671 * 5 2 1 7 7 C 1.86301 * 109.47068 * 179.97438 * 5 2 1 8 8 O 1.63108 * 109.47239 * 59.99710 * 5 2 1 9 9 C 1.42897 * 113.99834 * 179.97438 * 8 5 2 10 10 C 1.52999 * 109.46877 * 179.97438 * 9 8 5 11 11 O 1.42898 * 109.47245 * 65.00285 * 10 9 8 12 12 C 1.35954 * 117.00481 * 180.02562 * 11 10 9 13 13 C 1.38783 * 120.06477 * 89.99552 * 12 11 10 14 14 Cl 1.73600 * 120.03260 * 0.02562 * 13 12 11 15 15 C 1.38261 * 119.93597 * 180.02562 * 13 12 11 16 16 C 1.38259 * 120.06294 * 0.02562 * 15 13 12 17 17 C 1.50706 * 119.93402 * 179.97438 * 16 15 13 18 18 O 1.42903 * 109.47186 * 65.00479 * 17 16 15 19 19 Si 1.86302 * 109.46768 * 185.00158 * 17 16 15 20 20 H 1.48499 * 109.47007 * 60.00227 * 19 17 16 21 21 H 1.48496 * 109.47156 * 179.97438 * 19 17 16 22 22 H 1.48499 * 109.47188 * 300.00272 * 19 17 16 23 23 C 1.38253 * 120.12592 * 0.25942 * 16 15 13 24 24 C 1.38264 * 120.06436 * 359.44579 * 23 16 15 25 25 Cl 1.73600 * 120.03240 * 180.27464 * 24 23 16 26 26 H 1.09002 * 109.46773 * 300.00105 * 1 2 3 27 27 H 1.09002 * 109.47038 * 59.99184 * 1 2 3 28 28 H 1.08994 * 109.47628 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.46896 * 179.97438 * 3 2 1 30 30 H 1.08987 * 109.47347 * 300.00587 * 3 2 1 31 31 H 1.09006 * 109.46533 * 60.00683 * 3 2 1 32 32 H 1.08994 * 109.46988 * 300.00329 * 4 2 1 33 33 H 1.09002 * 109.46756 * 60.00536 * 4 2 1 34 34 H 1.09002 * 109.46992 * 179.97438 * 4 2 1 35 35 H 1.09000 * 109.47370 * 180.02562 * 6 5 2 36 36 H 1.09002 * 109.47265 * 300.00056 * 6 5 2 37 37 H 1.09006 * 109.47168 * 59.99863 * 6 5 2 38 38 H 1.08997 * 109.47504 * 300.00043 * 7 5 2 39 39 H 1.09002 * 109.46823 * 60.00329 * 7 5 2 40 40 H 1.09000 * 109.47224 * 179.97438 * 7 5 2 41 41 H 1.09000 * 109.46927 * 60.00360 * 9 8 5 42 42 H 1.08995 * 109.47115 * 299.99896 * 9 8 5 43 43 H 1.09001 * 109.47116 * 304.99934 * 10 9 8 44 44 H 1.09000 * 109.47405 * 185.00007 * 10 9 8 45 45 H 1.08008 * 119.96783 * 180.02562 * 15 13 12 46 46 H 1.08992 * 109.47155 * 305.00075 * 17 16 15 47 47 H 0.96698 * 113.99763 * 59.99746 * 18 17 16 48 48 H 1.08003 * 119.96815 * 179.72302 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2493 5 14 2.1510 -0.8784 1.5210 6 6 1.5301 -0.0003 3.0422 7 6 4.0140 -0.8790 1.5206 8 8 1.6073 -2.4161 1.5210 9 6 2.0294 -3.1819 2.6512 10 6 1.4634 -4.5995 2.5468 11 8 2.0308 -5.2566 1.4117 12 6 1.6302 -6.5338 1.1737 13 6 0.5279 -6.7776 0.3665 14 17 -0.3411 -5.4519 -0.3413 15 6 0.1224 -8.0775 0.1265 16 6 0.8137 -9.1339 0.6903 17 6 0.3689 -10.5496 0.4273 18 8 0.5307 -10.8497 -0.9604 19 14 1.4013 -11.7232 1.4410 20 1 1.2331 -11.4113 2.8831 21 1 0.9627 -13.1181 1.1824 22 1 2.8306 -11.5756 1.0660 23 6 1.9086 -8.8937 1.4996 24 6 2.3223 -7.5961 1.7381 25 17 3.7015 -7.2958 2.7487 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5140 -0.8899 28 1 -0.3634 -1.0276 -0.0005 29 1 3.1301 1.4424 0.0005 30 1 1.6767 1.9563 -0.8898 31 1 1.6768 1.9562 0.8901 32 1 1.6766 -1.7488 -1.2493 33 1 1.6766 -0.2073 -2.1393 34 1 3.1300 -0.7209 -1.2496 35 1 1.8938 -0.5139 3.9322 36 1 1.8935 1.0274 3.0423 37 1 0.4401 -0.0002 3.0423 38 1 4.3770 -1.3930 0.6307 39 1 4.3777 0.1485 1.5206 40 1 4.3774 -1.3926 2.4108 41 1 1.6653 -2.7121 3.5648 42 1 3.1182 -3.2258 2.6741 43 1 0.3803 -4.5510 2.4347 44 1 1.7105 -5.1569 3.4503 45 1 -0.7351 -8.2679 -0.5019 46 1 -0.6801 -10.6579 0.7026 47 1 1.4417 -10.7736 -1.2756 48 1 2.4440 -9.7206 1.9423 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_12913552_10264010.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:13:24 Heat of formation + Delta-G solvation = -148.349081 kcal Electronic energy + Delta-G solvation = -28957.405986 eV Core-core repulsion = 24802.170349 eV Total energy + Delta-G solvation = -4155.235637 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 380.094 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.42601 -39.42751 -38.01661 -37.85074 -37.44544 -36.92635 -36.82358 -32.33963 -31.94618 -30.41874 -29.30940 -29.05914 -27.83824 -27.38129 -26.57317 -24.38748 -23.80482 -22.69596 -20.41986 -19.52211 -18.61889 -18.17847 -17.59542 -17.03506 -16.89260 -16.30027 -16.13009 -15.88441 -15.75144 -15.58561 -15.13943 -14.94993 -14.86485 -14.83480 -14.59707 -14.13327 -14.00334 -13.74803 -13.51983 -13.47095 -13.36450 -13.17389 -13.12079 -12.96008 -12.93265 -12.74046 -12.56844 -12.40637 -12.22401 -12.15651 -12.10696 -12.05400 -11.85589 -11.76244 -11.69254 -11.54160 -11.24579 -11.02163 -10.49368 -10.30216 -10.04852 -9.96163 -9.82217 -0.39195 -0.27208 0.68503 1.05022 1.22713 1.45435 1.51300 1.54084 1.79631 1.92495 1.93613 2.14780 2.44572 2.50964 3.32253 3.55229 3.67918 3.82593 3.87173 4.01714 4.11454 4.12429 4.14041 4.15180 4.30593 4.44171 4.46725 4.53193 4.59054 4.69536 4.74560 4.75250 4.78933 4.80157 4.80238 4.82079 4.82838 4.96084 4.99614 5.08720 5.08973 5.19709 5.21189 5.33607 5.40361 5.43739 5.51018 5.59948 5.64881 6.22036 6.67123 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.382 4.382 3 C -0.140 4.140 4 C -0.134 4.134 5 Si 1.313 2.687 6 C -0.514 4.514 7 C -0.518 4.518 8 O -0.632 6.632 9 C 0.080 3.920 10 C 0.058 3.942 11 O -0.321 6.321 12 C 0.111 3.889 13 C -0.056 4.056 14 Cl -0.042 7.042 15 C -0.063 4.063 16 C -0.096 4.096 17 C -0.072 4.072 18 O -0.547 6.547 19 Si 0.966 3.034 20 H -0.251 1.251 21 H -0.269 1.269 22 H -0.249 1.249 23 C -0.102 4.102 24 C -0.052 4.052 25 Cl -0.044 7.044 26 H 0.063 0.937 27 H 0.046 0.954 28 H 0.052 0.948 29 H 0.061 0.939 30 H 0.049 0.951 31 H 0.065 0.935 32 H 0.051 0.949 33 H 0.046 0.954 34 H 0.057 0.943 35 H 0.074 0.926 36 H 0.077 0.923 37 H 0.071 0.929 38 H 0.064 0.936 39 H 0.076 0.924 40 H 0.070 0.930 41 H 0.102 0.898 42 H 0.073 0.927 43 H 0.067 0.933 44 H 0.082 0.918 45 H 0.160 0.840 46 H 0.139 0.861 47 H 0.391 0.609 48 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.224 -1.381 3.382 3.660 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.192 4.192 2 C -0.425 4.425 3 C -0.197 4.197 4 C -0.192 4.192 5 Si 1.443 2.557 6 C -0.616 4.616 7 C -0.619 4.619 8 O -0.592 6.592 9 C 0.005 3.995 10 C -0.015 4.015 11 O -0.238 6.238 12 C 0.065 3.935 13 C -0.084 4.084 14 Cl -0.012 7.012 15 C -0.082 4.082 16 C -0.097 4.097 17 C -0.183 4.183 18 O -0.354 6.354 19 Si 0.790 3.210 20 H -0.174 1.174 21 H -0.193 1.193 22 H -0.172 1.172 23 C -0.120 4.120 24 C -0.079 4.079 25 Cl -0.014 7.014 26 H 0.081 0.919 27 H 0.065 0.935 28 H 0.071 0.929 29 H 0.080 0.920 30 H 0.068 0.932 31 H 0.084 0.916 32 H 0.070 0.930 33 H 0.066 0.934 34 H 0.076 0.924 35 H 0.093 0.907 36 H 0.096 0.904 37 H 0.090 0.910 38 H 0.083 0.917 39 H 0.095 0.905 40 H 0.090 0.910 41 H 0.119 0.881 42 H 0.091 0.909 43 H 0.085 0.915 44 H 0.100 0.900 45 H 0.178 0.822 46 H 0.156 0.844 47 H 0.241 0.759 48 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -0.336 -1.955 3.690 4.190 hybrid contribution 0.532 1.077 -0.267 1.231 sum 0.197 -0.879 3.423 3.539 Atomic orbital electron populations 1.21515 0.94254 1.01546 1.01839 1.25923 1.00375 1.03012 1.13140 1.21594 1.01191 0.94651 1.02251 1.21507 1.00825 0.99833 0.97000 0.76257 0.62303 0.52873 0.64277 1.27045 1.06952 1.09794 1.17843 1.27118 1.25690 1.04761 1.04331 1.85406 1.79246 1.46445 1.48056 1.22280 0.99771 0.89302 0.88184 1.23180 0.98712 0.92471 0.87164 1.86142 1.66781 1.21994 1.48915 1.18246 0.92937 0.85297 0.97011 1.21427 0.95061 0.90975 1.00940 1.98420 1.74671 1.46195 1.81948 1.21153 1.00293 0.88521 0.98205 1.20368 0.94837 0.97311 0.97212 1.25009 1.09767 0.93995 0.89497 1.86528 1.34964 1.91216 1.22671 0.85437 0.78840 0.77978 0.78779 1.17439 1.19341 1.17229 1.21168 0.96968 0.95219 0.98686 1.21183 0.93663 0.94026 0.99070 1.98400 1.40308 1.96356 1.66379 0.91852 0.93493 0.92870 0.91958 0.93199 0.91613 0.92973 0.93443 0.92375 0.90652 0.90391 0.90957 0.91710 0.90477 0.91036 0.88075 0.90922 0.91509 0.90029 0.82201 0.84354 0.75940 0.83072 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.23 7.85 71.98 0.56 0.33 16 2 C -0.38 -0.36 0.53 -10.79 -0.01 -0.37 16 3 C -0.14 0.04 7.85 71.98 0.56 0.60 16 4 C -0.13 -0.41 7.85 71.98 0.56 0.15 16 5 Si 1.31 -1.93 8.45 68.60 0.58 -1.35 16 6 C -0.51 1.32 8.50 113.37 0.96 2.28 16 7 C -0.52 0.18 8.50 113.37 0.96 1.14 16 8 O -0.63 -1.05 8.52 -144.34 -1.23 -2.28 16 9 C 0.08 -0.14 5.51 71.98 0.40 0.26 16 10 C 0.06 0.02 6.44 71.98 0.46 0.48 16 11 O -0.32 -1.61 8.94 -88.39 -0.79 -2.40 16 12 C 0.11 0.44 5.71 22.53 0.13 0.57 16 13 C -0.06 -0.17 6.33 22.41 0.14 -0.03 16 14 Cl -0.04 -0.19 28.50 -2.72 -0.08 -0.27 16 15 C -0.06 0.03 9.46 22.28 0.21 0.24 16 16 C -0.10 0.23 5.35 -19.85 -0.11 0.12 16 17 C -0.07 0.36 2.80 71.24 0.20 0.56 16 18 O -0.55 1.77 12.83 -148.98 -1.91 -0.14 16 19 Si 0.97 -4.10 25.13 68.60 1.72 -2.38 16 20 H -0.25 0.85 7.11 99.48 0.71 1.55 16 21 H -0.27 0.15 7.11 99.48 0.71 0.86 16 22 H -0.25 1.00 7.05 99.48 0.70 1.70 16 23 C -0.10 0.10 8.45 22.28 0.19 0.29 16 24 C -0.05 -0.11 6.33 22.41 0.14 0.03 16 25 Cl -0.04 -0.09 28.50 -2.72 -0.08 -0.17 16 26 H 0.06 -0.02 7.79 -2.39 -0.02 -0.04 16 27 H 0.05 0.13 8.14 -2.39 -0.02 0.11 16 28 H 0.05 0.16 7.97 -2.39 -0.02 0.14 16 29 H 0.06 -0.10 7.79 -2.39 -0.02 -0.12 16 30 H 0.05 0.05 8.14 -2.39 -0.02 0.03 16 31 H 0.06 -0.15 7.79 -2.38 -0.02 -0.17 16 32 H 0.05 0.25 7.96 -2.39 -0.02 0.23 16 33 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16 34 H 0.06 0.11 7.79 -2.39 -0.02 0.09 16 35 H 0.07 -0.32 7.48 -2.39 -0.02 -0.33 16 36 H 0.08 -0.23 7.79 -2.39 -0.02 -0.25 16 37 H 0.07 -0.15 7.79 -2.38 -0.02 -0.17 16 38 H 0.06 0.11 7.79 -2.39 -0.02 0.09 16 39 H 0.08 -0.10 7.79 -2.39 -0.02 -0.12 16 40 H 0.07 -0.10 7.48 -2.39 -0.02 -0.12 16 41 H 0.10 -0.74 7.21 -2.39 -0.02 -0.75 16 42 H 0.07 -0.22 7.21 -2.39 -0.02 -0.24 16 43 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 44 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 45 H 0.16 -0.45 8.06 -2.91 -0.02 -0.48 16 46 H 0.14 -1.05 7.96 -2.39 -0.02 -1.07 16 47 H 0.39 -3.58 8.70 -74.06 -0.64 -4.23 16 48 H 0.15 -0.56 4.86 -2.91 -0.01 -0.57 16 Total: 0.00 -10.91 417.53 4.66 -6.26 By element: Atomic # 1 Polarization: -5.00 SS G_CDS: 1.06 Total: -3.94 kcal Atomic # 6 Polarization: 1.29 SS G_CDS: 5.38 Total: 6.67 kcal Atomic # 8 Polarization: -0.89 SS G_CDS: -3.93 Total: -4.82 kcal Atomic # 14 Polarization: -6.03 SS G_CDS: 2.30 Total: -3.73 kcal Atomic # 17 Polarization: -0.28 SS G_CDS: -0.16 Total: -0.44 kcal Total: -10.91 4.66 -6.26 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_12913552_10264010.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -142.090 kcal (2) G-P(sol) polarization free energy of solvation -10.915 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -153.005 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.656 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -6.259 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.349 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds