Wall clock time and date at job start Tue Mar 9 2021 14:19:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86302 * 1 3 3 C 1.86296 * 109.47118 * 2 1 4 4 C 1.86303 * 109.47220 * 240.00426 * 2 1 3 5 5 C 1.86794 * 109.47380 * 120.00266 * 2 1 3 6 6 C 1.38229 * 120.00392 * 89.99634 * 5 2 1 7 7 C 1.38234 * 120.00615 * 180.02562 * 6 5 2 8 8 C 1.38239 * 119.99681 * 0.02562 * 7 6 5 9 9 C 1.50699 * 120.00049 * 179.97438 * 8 7 6 10 10 O 1.42905 * 109.46972 * 90.00114 * 9 8 7 11 11 C 1.35950 * 116.99802 * 180.02562 * 10 9 8 12 12 C 1.38787 * 120.06263 * 269.72179 * 11 10 9 13 13 Cl 1.73602 * 120.03283 * 0.02562 * 12 11 10 14 14 C 1.38259 * 119.93644 * 179.74283 * 12 11 10 15 15 C 1.38262 * 120.06080 * 0.51241 * 14 12 11 16 16 C 1.50703 * 119.93312 * 179.73964 * 15 14 12 17 17 O 1.42891 * 109.47598 * 245.02126 * 16 15 14 18 18 Si 1.86295 * 109.47365 * 5.02617 * 16 15 14 19 19 H 1.48506 * 109.47191 * 299.99626 * 18 16 15 20 20 H 1.48497 * 109.47288 * 59.99639 * 18 16 15 21 21 H 1.48506 * 109.47277 * 179.97438 * 18 16 15 22 22 C 1.38248 * 120.13175 * 359.76679 * 15 14 12 23 23 C 1.38275 * 120.05806 * 359.97438 * 22 15 14 24 24 Cl 1.73604 * 120.02782 * 180.02562 * 23 22 15 25 25 C 1.38236 * 119.99618 * 0.24824 * 8 7 6 26 26 C 1.38231 * 120.00348 * 359.49741 * 25 8 7 27 27 H 1.08993 * 109.47055 * 299.99634 * 1 2 3 28 28 H 1.09003 * 109.47023 * 60.00078 * 1 2 3 29 29 H 1.09000 * 109.46948 * 179.97438 * 1 2 3 30 30 H 1.09003 * 109.47404 * 180.02562 * 3 2 1 31 31 H 1.09003 * 109.47567 * 300.00144 * 3 2 1 32 32 H 1.09001 * 109.47166 * 60.00245 * 3 2 1 33 33 H 1.09005 * 109.46656 * 299.99464 * 4 2 1 34 34 H 1.08997 * 109.47190 * 59.99193 * 4 2 1 35 35 H 1.08993 * 109.47404 * 180.02562 * 4 2 1 36 36 H 1.08006 * 120.00063 * 0.02562 * 6 5 2 37 37 H 1.07993 * 120.00649 * 179.97438 * 7 6 5 38 38 H 1.09000 * 109.47247 * 330.00049 * 9 8 7 39 39 H 1.09001 * 109.47358 * 209.99475 * 9 8 7 40 40 H 1.08000 * 119.97328 * 180.23436 * 14 12 11 41 41 H 1.09005 * 109.46683 * 125.02623 * 16 15 14 42 42 H 0.96701 * 114.00695 * 180.02562 * 17 16 15 43 43 H 1.07999 * 119.97558 * 179.97438 * 22 15 14 44 44 H 1.08004 * 119.99728 * 179.72715 * 25 8 7 45 45 H 1.08001 * 119.99970 * 180.22692 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4841 -0.8781 -1.5212 5 6 2.4857 -0.8806 1.5251 6 6 2.7161 -2.2431 1.4909 7 6 3.1764 -2.8950 2.6197 8 6 3.4059 -2.1842 3.7829 9 6 3.9072 -2.8948 5.0137 10 8 5.3363 -2.8948 5.0148 11 6 5.9526 -3.5011 6.0640 12 6 6.2725 -2.7700 7.1995 13 17 5.8855 -1.0797 7.2822 14 6 6.8945 -3.3905 8.2671 15 6 7.2073 -4.7356 8.2001 16 6 7.8905 -5.4076 9.3631 17 8 9.1949 -5.8356 8.9668 18 14 8.0349 -4.2045 10.7782 19 1 8.8324 -3.0279 10.3482 20 1 6.6792 -3.7598 11.1901 21 1 8.7076 -4.8670 11.9245 22 6 6.8950 -5.4651 7.0680 23 6 6.2682 -4.8511 5.9994 24 17 5.8759 -5.7681 4.5785 25 6 3.1701 -0.8226 3.8187 26 6 2.7148 -0.1699 2.6885 27 1 -0.3633 0.5137 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 3.5740 1.7565 -0.0005 31 1 2.1207 2.2703 -0.8900 32 1 2.1207 2.2702 0.8900 33 1 2.1208 -1.9058 -1.5212 34 1 2.1206 -0.3643 -2.4111 35 1 3.5740 -0.8785 -1.5210 36 1 2.5364 -2.7986 0.5822 37 1 3.3560 -3.9595 2.5931 38 1 3.5439 -3.9225 5.0132 39 1 3.5433 -2.3811 5.9035 40 1 7.1402 -2.8229 9.1525 41 1 7.3051 -6.2712 9.6787 42 1 9.6936 -6.2780 9.6674 43 1 7.1409 -6.5156 7.0182 44 1 3.3452 -0.2680 4.7288 45 1 2.5342 0.8945 2.7155 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_12913552_9276060.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:19:33 Heat of formation + Delta-G solvation = -74.334013 kcal Electronic energy + Delta-G solvation = -27360.820849 eV Core-core repulsion = 23325.647615 eV Total energy + Delta-G solvation = -4035.173234 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 384.063 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.44599 -40.12867 -38.95016 -37.82522 -37.72463 -37.09530 -33.27781 -32.01235 -31.82674 -31.69179 -29.55925 -28.42136 -28.39827 -27.51244 -26.18263 -24.39373 -23.40984 -22.70793 -22.06610 -19.40022 -18.73816 -18.04662 -17.84515 -17.54499 -16.55225 -16.41065 -16.18411 -15.95697 -15.48414 -15.37632 -14.87854 -14.74932 -14.43721 -14.38485 -14.28401 -14.16470 -14.07356 -13.82310 -13.74476 -13.43784 -13.42918 -13.24700 -13.23988 -13.16779 -13.08344 -12.80138 -12.61082 -12.25472 -12.14173 -12.12267 -12.07163 -11.93257 -11.87726 -11.03528 -11.03139 -10.88468 -10.79229 -10.55993 -9.95203 -9.92041 -9.71981 -9.52570 -0.43754 -0.25148 0.28923 0.60741 0.70212 0.92807 1.18998 1.29105 1.36050 1.73235 1.76747 1.87041 1.87939 2.03002 2.46727 2.56957 3.06352 3.09701 3.54508 3.66919 3.75908 3.82361 3.90186 3.96439 4.04782 4.16638 4.28978 4.29593 4.35979 4.55279 4.56584 4.69963 4.72029 4.73034 4.74415 4.77066 4.77730 4.78197 4.81458 4.96068 5.06246 5.15025 5.21223 5.43689 5.49398 5.52919 5.55188 5.66824 5.69658 6.16037 6.19892 6.39906 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.449 4.449 2 Si 1.059 2.941 3 C -0.450 4.450 4 C -0.450 4.450 5 C -0.361 4.361 6 C -0.092 4.092 7 C -0.104 4.104 8 C -0.084 4.084 9 C 0.107 3.893 10 O -0.309 6.309 11 C 0.120 3.880 12 C -0.040 4.040 13 Cl -0.038 7.038 14 C -0.099 4.099 15 C -0.057 4.057 16 C -0.080 4.080 17 O -0.542 6.542 18 Si 0.935 3.065 19 H -0.242 1.242 20 H -0.244 1.244 21 H -0.249 1.249 22 C -0.063 4.063 23 C -0.045 4.045 24 Cl -0.038 7.038 25 C -0.104 4.104 26 C -0.092 4.092 27 H 0.069 0.931 28 H 0.070 0.930 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.069 0.931 33 H 0.069 0.931 34 H 0.071 0.929 35 H 0.071 0.929 36 H 0.122 0.878 37 H 0.120 0.880 38 H 0.066 0.934 39 H 0.066 0.934 40 H 0.142 0.858 41 H 0.085 0.915 42 H 0.385 0.615 43 H 0.150 0.850 44 H 0.120 0.880 45 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.462 -1.557 2.508 3.294 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.556 4.556 2 Si 1.251 2.749 3 C -0.557 4.557 4 C -0.557 4.557 5 C -0.403 4.403 6 C -0.110 4.110 7 C -0.122 4.122 8 C -0.084 4.084 9 C 0.034 3.966 10 O -0.226 6.226 11 C 0.074 3.926 12 C -0.068 4.068 13 Cl -0.008 7.008 14 C -0.118 4.118 15 C -0.057 4.057 16 C -0.190 4.190 17 O -0.348 6.348 18 Si 0.757 3.243 19 H -0.166 1.166 20 H -0.168 1.168 21 H -0.173 1.173 22 C -0.082 4.082 23 C -0.073 4.073 24 Cl -0.008 7.008 25 C -0.122 4.122 26 C -0.110 4.110 27 H 0.088 0.912 28 H 0.090 0.910 29 H 0.088 0.912 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.088 0.912 33 H 0.088 0.912 34 H 0.090 0.910 35 H 0.090 0.910 36 H 0.140 0.860 37 H 0.138 0.862 38 H 0.085 0.915 39 H 0.085 0.915 40 H 0.159 0.841 41 H 0.103 0.897 42 H 0.233 0.767 43 H 0.168 0.832 44 H 0.138 0.862 45 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -1.569 -0.573 2.408 2.930 hybrid contribution 0.128 -0.687 0.361 0.786 sum -1.440 -1.259 2.768 3.365 Atomic orbital electron populations 1.26119 1.20449 1.04566 1.04476 0.78187 0.66832 0.66136 0.63757 1.26136 1.06516 1.18557 1.04530 1.26134 1.06516 1.08032 1.15054 1.27449 1.03140 0.99505 1.10160 1.21062 0.97625 0.94661 0.97680 1.21133 0.98628 0.99869 0.92553 1.19399 1.00544 0.94103 0.94315 1.21655 0.78311 1.00104 0.96570 1.86213 1.19866 1.76121 1.40410 1.18070 0.97928 0.88874 0.87689 1.21031 1.03727 0.87444 0.94570 1.98408 1.92588 1.11618 1.98222 1.20939 0.98542 0.94105 0.98183 1.19128 0.98646 0.92411 0.95543 1.24670 0.86732 1.05407 1.02200 1.86506 1.26040 1.80237 1.42027 0.85881 0.82404 0.79629 0.76427 1.16563 1.16775 1.17257 1.20958 0.95436 1.01444 0.90368 1.21241 1.03717 0.91103 0.91236 1.98408 1.92455 1.72487 1.37492 1.21131 0.98663 0.93562 0.98847 1.21062 0.97653 0.99674 0.92639 0.91174 0.91042 0.91172 0.91025 0.90973 0.91183 0.91182 0.90970 0.91024 0.85977 0.86215 0.91526 0.91548 0.84083 0.89694 0.76706 0.83223 0.86228 0.85982 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.54 8.65 101.05 0.87 1.42 16 2 Si 1.06 -2.15 12.32 -169.99 -2.09 -4.24 16 3 C -0.45 0.57 8.53 101.05 0.86 1.43 16 4 C -0.45 0.57 8.53 101.05 0.86 1.43 16 5 C -0.36 -0.16 4.59 -39.58 -0.18 -0.34 16 6 C -0.09 -0.09 9.29 -39.59 -0.37 -0.46 16 7 C -0.10 -0.19 9.70 -39.58 -0.38 -0.58 16 8 C -0.08 -0.18 5.51 -104.62 -0.58 -0.76 16 9 C 0.11 0.17 6.19 36.01 0.22 0.40 16 10 O -0.31 -1.01 8.96 -19.58 -0.18 -1.19 16 11 C 0.12 0.32 5.71 -39.18 -0.22 0.10 16 12 C -0.04 -0.09 6.33 -39.37 -0.25 -0.34 16 13 Cl -0.04 -0.08 28.50 -51.86 -1.48 -1.56 16 14 C -0.10 -0.10 8.45 -39.56 -0.33 -0.44 16 15 C -0.06 -0.02 5.38 -104.61 -0.56 -0.59 16 16 C -0.08 0.14 2.79 36.01 0.10 0.24 16 17 O -0.54 0.64 12.81 -35.23 -0.45 0.18 16 18 Si 0.94 -1.55 25.13 -169.99 -4.27 -5.83 16 19 H -0.24 0.04 7.04 56.52 0.40 0.43 16 20 H -0.24 0.29 7.11 56.52 0.40 0.69 16 21 H -0.25 0.41 7.11 56.52 0.40 0.81 16 22 C -0.06 -0.04 9.46 -39.56 -0.37 -0.42 16 23 C -0.05 -0.09 6.33 -39.37 -0.25 -0.34 16 24 Cl -0.04 -0.07 28.50 -51.86 -1.48 -1.55 16 25 C -0.10 -0.19 9.70 -39.58 -0.38 -0.58 16 26 C -0.09 -0.09 9.29 -39.58 -0.37 -0.46 16 27 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 28 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 29 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 30 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 31 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 32 H 0.07 -0.10 7.69 -51.93 -0.40 -0.50 16 33 H 0.07 -0.10 7.69 -51.93 -0.40 -0.50 16 34 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 35 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 36 H 0.12 -0.11 7.43 -52.48 -0.39 -0.50 16 37 H 0.12 0.10 8.06 -52.49 -0.42 -0.33 16 38 H 0.07 0.05 8.09 -51.93 -0.42 -0.37 16 39 H 0.07 0.05 8.08 -51.93 -0.42 -0.37 16 40 H 0.14 -0.03 4.85 -52.49 -0.25 -0.29 16 41 H 0.09 -0.34 7.96 -51.93 -0.41 -0.75 16 42 H 0.38 -2.14 8.74 45.56 0.40 -1.75 16 43 H 0.15 -0.11 8.06 -52.49 -0.42 -0.54 16 44 H 0.12 0.09 8.06 -52.48 -0.42 -0.33 16 45 H 0.12 -0.11 7.43 -52.49 -0.39 -0.50 16 LS Contribution 409.81 15.07 6.18 6.18 Total: 0.00 -5.76 409.81 -10.76 -16.52 By element: Atomic # 1 Polarization: -2.59 SS G_CDS: -5.65 Total: -8.24 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: -1.33 Total: -0.27 kcal Atomic # 8 Polarization: -0.38 SS G_CDS: -0.63 Total: -1.01 kcal Atomic # 14 Polarization: -3.70 SS G_CDS: -6.37 Total: -10.07 kcal Atomic # 17 Polarization: -0.15 SS G_CDS: -2.96 Total: -3.10 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -5.76 -10.76 -16.52 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_12913552_9276060.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.818 kcal (2) G-P(sol) polarization free energy of solvation -5.758 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.575 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.759 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.516 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.334 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds