Wall clock time and date at job start Tue Mar 9 2021 14:20:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53003 * 109.46946 * 2 1 4 4 C 1.53004 * 109.47071 * 240.00903 * 2 1 3 5 5 O 1.42897 * 109.47558 * 120.00066 * 2 1 3 6 6 C 1.42902 * 113.99340 * 60.00393 * 5 2 1 7 7 H 1.08995 * 112.85471 * 18.79722 * 6 5 2 8 8 C 1.53781 * 113.61460 * 150.00345 * 6 5 2 9 9 C 1.53773 * 87.08759 * 140.05904 * 8 6 5 10 10 H 1.09002 * 113.61389 * 89.19526 * 9 8 6 11 11 C 1.53002 * 113.61938 * 220.01853 * 9 8 6 12 12 O 1.42901 * 109.47158 * 183.46568 * 11 9 8 13 13 C 1.35960 * 116.99769 * 179.97438 * 12 11 9 14 14 C 1.38829 * 120.04655 * 180.02562 * 13 12 11 15 15 F 1.35098 * 120.05990 * 0.02562 * 14 13 12 16 16 C 1.38536 * 119.88532 * 180.02562 * 14 13 12 17 17 F 1.35104 * 120.00880 * 179.97438 * 16 14 13 18 18 C 1.38458 * 119.98790 * 0.25088 * 16 14 13 19 19 C 1.50693 * 119.95290 * 179.75189 * 18 16 14 20 20 O 1.42899 * 109.47305 * 75.00002 * 19 18 16 21 21 Si 1.86302 * 109.47099 * 195.00015 * 19 18 16 22 22 C 1.38262 * 120.09358 * 359.47390 * 18 16 14 23 23 C 1.38168 * 120.11340 * 0.54902 * 22 18 16 24 24 C 1.53790 * 87.17237 * 334.60827 * 9 8 6 25 25 H 1.09007 * 109.47458 * 299.99520 * 1 2 3 26 26 H 1.08998 * 109.47471 * 59.99615 * 1 2 3 27 27 H 1.09000 * 109.47386 * 180.02562 * 1 2 3 28 28 H 1.08999 * 109.47302 * 179.97438 * 3 2 1 29 29 H 1.08998 * 109.47350 * 300.00459 * 3 2 1 30 30 H 1.09009 * 109.47096 * 60.00606 * 3 2 1 31 31 H 1.09006 * 109.46535 * 299.99486 * 4 2 1 32 32 H 1.08998 * 109.47396 * 59.99436 * 4 2 1 33 33 H 1.09004 * 109.46982 * 180.02562 * 4 2 1 34 34 H 1.09004 * 113.61482 * 25.50622 * 8 6 5 35 35 H 1.09004 * 113.61596 * 254.61276 * 8 6 5 36 36 H 1.09003 * 109.46575 * 63.46825 * 11 9 8 37 37 H 1.08998 * 109.46857 * 303.46890 * 11 9 8 38 38 H 1.09003 * 109.46983 * 314.99770 * 19 18 16 39 39 H 0.96701 * 114.00130 * 60.00392 * 20 19 18 40 40 H 1.48508 * 109.99898 * 58.67760 * 21 19 18 41 41 H 1.48497 * 110.00204 * 179.97438 * 21 19 18 42 42 H 1.08000 * 119.93853 * 180.27477 * 22 18 16 43 43 H 1.07997 * 119.99530 * 179.72413 * 23 22 18 44 44 H 1.09004 * 113.61272 * 139.93348 * 24 9 8 45 45 H 1.09001 * 113.61376 * 270.83816 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7211 -1.2494 5 8 2.0064 -0.6736 1.1667 6 6 1.5848 -2.0355 1.2643 7 1 1.2523 -2.4451 0.3105 8 6 2.5838 -2.9379 2.0076 9 6 1.3669 -3.6136 2.6612 10 1 0.9757 -4.4555 2.0899 11 6 1.5703 -3.9432 4.1414 12 8 0.4236 -4.6371 4.6368 13 6 0.4431 -5.0062 5.9453 14 6 -0.6378 -5.6841 6.4925 15 9 -1.7105 -5.9785 5.7258 16 6 -0.6146 -6.0580 7.8262 17 9 -1.6654 -6.7173 8.3615 18 6 0.4832 -5.7509 8.6121 19 6 0.5052 -6.1532 10.0641 20 8 0.7446 -7.5583 10.1657 21 14 1.8610 -5.2271 10.9446 22 6 1.5617 -5.0808 8.0649 23 6 1.5427 -4.7055 6.7353 24 6 0.6046 -2.2995 2.4219 25 1 -0.3634 0.5138 0.8901 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3634 -1.0276 0.0005 28 1 3.1299 1.4426 0.0005 29 1 1.6765 1.9564 -0.8899 30 1 1.6766 1.9564 0.8901 31 1 1.6766 -1.7488 -1.2494 32 1 1.6766 -0.2072 -2.1393 33 1 3.1300 -0.7215 -1.2491 34 1 3.2163 -2.4001 2.7138 35 1 3.1489 -3.5983 1.3497 36 1 1.7072 -3.0196 4.7037 37 1 2.4531 -4.5723 4.2554 38 1 -0.4547 -5.9141 10.5220 39 1 1.5833 -7.8435 9.7779 40 1 1.6409 -3.7638 10.8191 41 1 1.8928 -5.6144 12.3778 42 1 2.4186 -4.8464 8.6791 43 1 2.3843 -4.1782 6.3111 44 1 -0.4259 -2.4453 2.0979 45 1 0.6949 -1.5868 3.2416 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_13025868_14598384.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:20:33 Heat of formation + Delta-G solvation = -154.181118 kcal Electronic energy + Delta-G solvation = -28272.488227 eV Core-core repulsion = 23894.134291 eV Total energy + Delta-G solvation = -4378.353936 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.152 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -50.40631 -49.46241 -41.54616 -40.79656 -39.35394 -38.25385 -37.21656 -33.96971 -32.19803 -31.60657 -29.70689 -28.44998 -28.37918 -26.79037 -26.54900 -24.74162 -23.54988 -22.73281 -20.91909 -20.78895 -19.79088 -18.88856 -18.50033 -17.91533 -17.68947 -17.66511 -17.12321 -16.87937 -16.67164 -16.18611 -16.13189 -15.86732 -15.78891 -15.57788 -15.38020 -15.12149 -14.69229 -14.48975 -14.44707 -14.05492 -13.62016 -13.54028 -13.52658 -13.38264 -13.15772 -13.03711 -12.92172 -12.79898 -12.69566 -12.53359 -12.32486 -12.18687 -12.05862 -11.93878 -11.79624 -11.46576 -11.28623 -10.58387 -10.41539 -9.94738 -9.49424 -5.15625 -0.28639 -0.21222 1.14164 1.55282 1.64046 1.89566 2.08881 2.62809 2.79308 3.18477 3.32267 3.32849 3.37030 3.44345 3.53222 3.65732 3.67362 3.70474 3.82540 3.89448 3.94762 3.98475 4.02923 4.07040 4.22947 4.29096 4.39527 4.51176 4.53367 4.58459 4.62513 4.65565 4.67950 4.70837 4.75163 4.76361 4.82860 4.85919 4.87924 4.92606 5.03704 5.06052 5.21469 5.25008 5.29467 5.38067 6.01778 6.34550 6.49242 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.361 6.361 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.125 4.125 9 C -0.111 4.111 10 H 0.106 0.894 11 C 0.069 3.931 12 O -0.298 6.298 13 C 0.137 3.863 14 C 0.032 3.968 15 F -0.118 7.118 16 C 0.134 3.866 17 F -0.113 7.113 18 C -0.170 4.170 19 C -0.066 4.066 20 O -0.534 6.534 21 Si 0.694 3.306 22 C -0.052 4.052 23 C -0.189 4.189 24 C -0.149 4.149 25 H 0.064 0.936 26 H 0.066 0.934 27 H 0.058 0.942 28 H 0.063 0.937 29 H 0.071 0.929 30 H 0.063 0.937 31 H 0.059 0.941 32 H 0.068 0.932 33 H 0.065 0.935 34 H 0.095 0.905 35 H 0.079 0.921 36 H 0.072 0.928 37 H 0.072 0.928 38 H 0.116 0.884 39 H 0.379 0.621 40 H -0.253 1.253 41 H -0.250 1.250 42 H 0.149 0.851 43 H 0.151 0.849 44 H 0.073 0.927 45 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.290 2.247 -2.867 7.268 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.280 6.280 6 C 0.004 3.996 7 H 0.110 0.890 8 C -0.163 4.163 9 C -0.129 4.129 10 H 0.124 0.876 11 C -0.006 4.006 12 O -0.211 6.211 13 C 0.089 3.911 14 C 0.011 3.989 15 F -0.097 7.097 16 C 0.113 3.887 17 F -0.091 7.091 18 C -0.171 4.171 19 C -0.176 4.176 20 O -0.339 6.339 21 Si 0.594 3.406 22 C -0.070 4.070 23 C -0.208 4.208 24 C -0.187 4.187 25 H 0.083 0.917 26 H 0.085 0.915 27 H 0.077 0.923 28 H 0.083 0.917 29 H 0.090 0.910 30 H 0.082 0.918 31 H 0.078 0.922 32 H 0.087 0.913 33 H 0.084 0.916 34 H 0.113 0.887 35 H 0.098 0.902 36 H 0.090 0.910 37 H 0.091 0.909 38 H 0.133 0.867 39 H 0.227 0.773 40 H -0.177 1.177 41 H -0.175 1.175 42 H 0.166 0.834 43 H 0.168 0.832 44 H 0.092 0.908 45 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 5.785 2.871 -1.964 6.750 hybrid contribution -1.176 -0.325 -0.460 1.304 sum 4.609 2.546 -2.424 5.797 Atomic orbital electron populations 1.22474 0.95439 1.02560 1.02954 1.21544 0.93255 0.93271 0.85332 1.21773 1.02003 0.93201 1.02650 1.22475 1.02324 1.00865 0.98000 1.88028 1.73786 1.23242 1.42992 1.23593 0.95502 0.82877 0.97633 0.88953 1.23221 0.96240 0.97282 0.99521 1.22335 0.98820 0.98301 0.93475 0.87608 1.23007 0.86786 0.96135 0.94673 1.86173 1.42754 1.71261 1.20905 1.18683 0.92915 0.94600 0.84893 1.16833 0.86494 1.07078 0.88449 1.91556 1.52264 1.91618 1.74254 1.17125 0.86173 0.96048 0.89350 1.91582 1.54353 1.77555 1.85647 1.20275 0.94304 1.04604 0.97948 1.25053 1.09940 0.88537 0.94084 1.86576 1.44342 1.20555 1.82463 0.94973 0.85404 0.79041 0.81183 1.20708 0.96728 0.95077 0.94501 1.21197 0.98802 1.06205 0.94613 1.23663 0.99195 0.96150 0.99656 0.91668 0.91494 0.92271 0.91743 0.91034 0.91764 0.92224 0.91318 0.91578 0.88683 0.90239 0.90984 0.90935 0.86653 0.77349 1.17721 1.17460 0.83409 0.83153 0.90819 0.89036 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.14 8.38 37.16 0.31 0.45 16 2 C 0.10 -0.03 1.11 -90.62 -0.10 -0.13 16 3 C -0.14 0.10 8.84 37.16 0.33 0.43 16 4 C -0.18 0.21 8.38 37.16 0.31 0.52 16 5 O -0.36 -0.34 10.00 -35.23 -0.35 -0.70 16 6 C 0.06 -0.05 2.82 -25.82 -0.07 -0.13 16 7 H 0.09 -0.14 5.54 -51.93 -0.29 -0.42 16 8 C -0.13 0.27 7.47 -25.92 -0.19 0.07 16 9 C -0.11 0.20 4.00 -89.81 -0.36 -0.16 16 10 H 0.11 -0.17 8.14 -51.93 -0.42 -0.59 16 11 C 0.07 -0.13 4.57 37.16 0.17 0.04 16 12 O -0.30 -0.38 10.00 -19.61 -0.20 -0.58 16 13 C 0.14 0.15 6.69 -39.19 -0.26 -0.11 16 14 C 0.03 0.11 7.32 -39.25 -0.29 -0.18 16 15 F -0.12 -0.64 17.03 2.25 0.04 -0.60 16 16 C 0.13 0.38 7.25 -39.39 -0.29 0.10 16 17 F -0.11 -0.55 16.66 2.25 0.04 -0.51 16 18 C -0.17 -0.03 5.26 -104.54 -0.55 -0.58 16 19 C -0.07 0.01 2.45 36.00 0.09 0.09 16 20 O -0.53 -0.28 12.88 -35.23 -0.45 -0.74 16 21 Si 0.69 -1.44 29.92 -169.99 -5.09 -6.52 16 22 C -0.05 0.12 8.65 -39.60 -0.34 -0.22 16 23 C -0.19 0.34 9.04 -39.44 -0.36 -0.02 16 24 C -0.15 0.13 7.48 -25.82 -0.19 -0.07 16 25 H 0.06 -0.01 8.14 -51.92 -0.42 -0.43 16 26 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.06 -0.05 7.02 -51.93 -0.36 -0.42 16 28 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 29 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.06 -0.02 8.14 -51.92 -0.42 -0.44 16 31 H 0.06 -0.09 6.24 -51.93 -0.32 -0.41 16 32 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.09 -0.21 8.10 -51.93 -0.42 -0.63 16 35 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 36 H 0.07 -0.21 7.39 -51.93 -0.38 -0.59 16 37 H 0.07 -0.26 7.66 -51.93 -0.40 -0.66 16 38 H 0.12 0.12 7.90 -51.93 -0.41 -0.29 16 39 H 0.38 -1.52 8.70 45.56 0.40 -1.12 16 40 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 41 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 42 H 0.15 -0.81 5.13 -52.49 -0.27 -1.08 16 43 H 0.15 -0.68 6.30 -52.49 -0.33 -1.01 16 44 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 45 H 0.09 -0.03 7.92 -51.93 -0.41 -0.44 16 LS Contribution 369.74 15.07 5.57 5.57 Total: 0.00 -6.89 369.74 -8.86 -15.75 By element: Atomic # 1 Polarization: -5.14 SS G_CDS: -6.63 Total: -11.77 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: -1.79 Total: 0.10 kcal Atomic # 8 Polarization: -1.01 SS G_CDS: -1.00 Total: -2.01 kcal Atomic # 9 Polarization: -1.19 SS G_CDS: 0.08 Total: -1.11 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.09 Total: -6.52 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -6.89 -8.86 -15.75 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_13025868_14598384.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -138.433 kcal (2) G-P(sol) polarization free energy of solvation -6.885 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.318 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.863 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.748 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.181 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds