Wall clock time and date at job start Tue Mar 9 2021 14:20:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.38205 * 119.95487 * 254.99881 * 4 2 1 6 6 C 1.38219 * 120.11770 * 179.97438 * 5 4 2 7 7 C 1.38654 * 120.01254 * 0.02562 * 6 5 4 8 8 O 1.35947 * 120.04956 * 179.97438 * 7 6 5 9 9 C 1.42905 * 117.00290 * 0.02562 * 8 7 6 10 10 C 1.52994 * 109.47169 * 180.02562 * 9 8 7 11 11 H 1.09003 * 109.47154 * 304.99709 * 10 9 8 12 12 C 1.53001 * 109.47450 * 65.00232 * 10 9 8 13 13 C 1.53002 * 109.47033 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47051 * 299.99608 * 13 12 10 15 15 H 1.09003 * 109.47115 * 300.00148 * 14 13 12 16 16 O 1.42899 * 109.46950 * 180.02562 * 14 13 12 17 17 C 1.52999 * 109.47194 * 60.00510 * 14 13 12 18 18 C 1.53002 * 109.46705 * 299.99701 * 17 14 13 19 19 C 1.38879 * 119.90270 * 359.97438 * 7 6 5 20 20 F 1.35096 * 120.06080 * 180.02562 * 19 7 6 21 21 C 1.38497 * 119.94905 * 74.72785 * 4 2 1 22 22 F 1.35099 * 120.00950 * 359.97438 * 21 4 2 23 23 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 24 24 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 25 25 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 26 26 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 27 27 H 1.08004 * 119.94019 * 0.02562 * 5 4 2 28 28 H 1.08000 * 119.99097 * 179.97438 * 6 5 4 29 29 H 1.08996 * 109.46696 * 300.00135 * 9 8 7 30 30 H 1.08998 * 109.47003 * 59.99930 * 9 8 7 31 31 H 1.09001 * 109.46571 * 299.99194 * 12 10 9 32 32 H 1.08989 * 109.47282 * 59.99636 * 12 10 9 33 33 H 1.08999 * 109.46753 * 179.97438 * 13 12 10 34 34 H 1.08997 * 109.47421 * 60.00068 * 13 12 10 35 35 H 0.96704 * 113.99853 * 59.99676 * 16 14 13 36 36 H 1.08995 * 109.46825 * 179.97438 * 17 14 13 37 37 H 1.08997 * 109.46978 * 59.99724 * 17 14 13 38 38 H 1.08997 * 109.47421 * 299.99751 * 18 17 14 39 39 H 1.08999 * 109.46753 * 180.02562 * 18 17 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.4535 -1.9858 -1.1260 6 6 2.9148 -2.6407 -2.2524 7 6 2.8546 -2.0183 -3.4900 8 8 3.3085 -2.6616 -4.5983 9 6 3.8344 -3.9776 -4.4149 10 6 4.2927 -4.5362 -5.7635 11 1 3.4672 -4.4931 -6.4740 12 6 5.4627 -3.7025 -6.2898 13 6 5.9214 -4.2616 -7.6382 14 6 6.3686 -5.7141 -7.4625 15 1 7.1939 -5.7568 -6.7517 16 8 6.7975 -6.2360 -8.7217 17 6 5.1986 -6.5479 -6.9362 18 6 4.7399 -5.9888 -5.5879 19 6 2.3299 -0.7368 -3.5957 20 9 2.2693 -0.1276 -4.7999 21 6 1.8638 -0.0866 -2.4651 22 9 1.3474 1.1578 -2.5660 23 1 -0.3934 0.4417 -0.7651 24 1 1.7923 -0.5139 0.8900 25 1 1.5879 2.4585 -1.2243 26 1 1.5615 2.4679 1.2085 27 1 2.5006 -2.4718 -0.1627 28 1 3.3229 -3.6371 -2.1684 29 1 4.6825 -3.9379 -3.7313 30 1 3.0614 -4.6229 -3.9977 31 1 5.1442 -2.6676 -6.4146 32 1 6.2881 -3.7456 -5.5793 33 1 6.7546 -3.6674 -8.0133 34 1 5.0962 -4.2188 -8.3489 35 1 7.5384 -5.7549 -9.1151 36 1 5.5171 -7.5827 -6.8115 37 1 4.3734 -6.5051 -7.6470 38 1 5.5652 -6.0315 -4.8771 39 1 3.9067 -6.5830 -5.2127 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_13025868_16737254.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:20:45 Heat of formation + Delta-G solvation = -183.847801 kcal Electronic energy + Delta-G solvation = -24810.309233 eV Core-core repulsion = 20741.744091 eV Total energy + Delta-G solvation = -4068.565142 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 301.121 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -50.74484 -49.64795 -41.48696 -40.21465 -39.15235 -37.52030 -36.70686 -32.61206 -31.96445 -31.62866 -31.40022 -27.40555 -26.24873 -24.25690 -23.91317 -23.19458 -22.16108 -21.03524 -19.84623 -19.11334 -18.56267 -18.25976 -17.87801 -17.74811 -17.40388 -17.07560 -16.57520 -16.19525 -16.04866 -15.90856 -15.77375 -15.58018 -15.38716 -14.89378 -14.64579 -14.24548 -14.00820 -13.67754 -13.62361 -13.46322 -13.34850 -13.31671 -12.77900 -12.73537 -12.51057 -12.25332 -12.06664 -11.76848 -11.72811 -11.29049 -11.22490 -10.80214 -10.77620 -9.98851 -9.44321 -4.96034 -0.34621 -0.20508 1.20953 1.62406 1.64234 1.95484 2.14878 2.69104 3.07055 3.09256 3.28401 3.37690 3.39978 3.46472 3.56629 3.63621 3.71787 3.84013 3.92727 3.97525 4.11568 4.18807 4.20251 4.30218 4.34232 4.34542 4.40702 4.44309 4.65383 4.71092 4.73851 4.82504 4.92231 4.96246 4.98521 5.03493 5.04901 5.18840 5.28858 5.33996 5.99535 6.25989 6.65288 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.066 4.066 3 Si 0.670 3.330 4 C -0.158 4.158 5 C -0.036 4.036 6 C -0.190 4.190 7 C 0.133 3.867 8 O -0.298 6.298 9 C 0.060 3.940 10 C -0.088 4.088 11 H 0.087 0.913 12 C -0.112 4.112 13 C -0.153 4.153 14 C 0.103 3.897 15 H 0.055 0.945 16 O -0.569 6.569 17 C -0.112 4.112 18 C -0.109 4.109 19 C 0.040 3.960 20 F -0.118 7.118 21 C 0.100 3.900 22 F -0.112 7.112 23 H 0.377 0.623 24 H 0.125 0.875 25 H -0.232 1.232 26 H -0.258 1.258 27 H 0.148 0.852 28 H 0.149 0.851 29 H 0.071 0.929 30 H 0.070 0.930 31 H 0.075 0.925 32 H 0.065 0.935 33 H 0.067 0.933 34 H 0.072 0.928 35 H 0.379 0.621 36 H 0.074 0.926 37 H 0.072 0.928 38 H 0.070 0.930 39 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.311 -3.039 2.296 5.752 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.175 4.175 3 Si 0.570 3.430 4 C -0.159 4.159 5 C -0.054 4.054 6 C -0.209 4.209 7 C 0.085 3.915 8 O -0.211 6.211 9 C -0.015 4.015 10 C -0.107 4.107 11 H 0.105 0.895 12 C -0.150 4.150 13 C -0.190 4.190 14 C 0.044 3.956 15 H 0.073 0.927 16 O -0.375 6.375 17 C -0.149 4.149 18 C -0.147 4.147 19 C 0.019 3.981 20 F -0.097 7.097 21 C 0.079 3.921 22 F -0.091 7.091 23 H 0.225 0.775 24 H 0.143 0.857 25 H -0.156 1.156 26 H -0.183 1.183 27 H 0.166 0.834 28 H 0.166 0.834 29 H 0.089 0.911 30 H 0.089 0.911 31 H 0.094 0.906 32 H 0.084 0.916 33 H 0.086 0.914 34 H 0.091 0.909 35 H 0.227 0.773 36 H 0.093 0.907 37 H 0.091 0.909 38 H 0.089 0.911 39 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 3.684 -2.801 2.695 5.355 hybrid contribution -0.688 0.411 -0.764 1.108 sum 2.996 -2.390 1.931 4.291 Atomic orbital electron populations 1.86633 1.17153 1.79923 1.49415 1.24877 0.84246 1.11197 0.97182 0.95499 0.91466 0.74997 0.81060 1.20093 1.05420 0.96896 0.93519 1.20793 0.93691 0.91777 0.99161 1.21298 1.06385 1.02256 0.90939 1.18686 0.94943 0.90393 0.87439 1.86150 1.74898 1.30546 1.29526 1.23085 0.98335 0.80740 0.99307 1.21252 0.99230 0.94923 0.95286 0.89499 1.21526 0.97174 0.99853 0.96423 1.22279 1.02179 0.96363 0.98219 1.21843 0.96216 0.92223 0.85308 0.92697 1.86518 1.55216 1.59410 1.36359 1.21439 0.97642 0.99531 0.96320 1.21474 1.01643 0.94038 0.97524 1.16729 1.08832 0.91315 0.81209 1.91558 1.94601 1.82313 1.41189 1.17258 1.00336 0.81555 0.92922 1.91595 1.84279 1.36930 1.96253 0.77539 0.85689 1.15593 1.18338 0.83402 0.83386 0.91120 0.91143 0.90650 0.91636 0.91429 0.90900 0.77324 0.90733 0.90897 0.91148 0.90671 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.70 12.88 -35.23 -0.45 -1.15 16 2 C -0.07 0.04 2.80 36.01 0.10 0.14 16 3 Si 0.67 -0.19 30.83 -169.99 -5.24 -5.43 16 4 C -0.16 0.07 4.78 -104.54 -0.50 -0.43 16 5 C -0.04 0.08 9.66 -39.60 -0.38 -0.30 16 6 C -0.19 0.37 9.04 -39.43 -0.36 0.02 16 7 C 0.13 0.08 6.69 -39.19 -0.26 -0.18 16 8 O -0.30 -0.21 9.54 -19.57 -0.19 -0.39 16 9 C 0.06 -0.15 4.12 37.15 0.15 0.01 16 10 C -0.09 0.19 2.43 -90.62 -0.22 -0.03 16 11 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 12 C -0.11 0.18 5.10 -26.73 -0.14 0.05 16 13 C -0.15 0.20 5.54 -26.73 -0.15 0.05 16 14 C 0.10 -0.09 3.47 -26.73 -0.09 -0.18 16 15 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 16 O -0.57 -0.36 13.32 -35.23 -0.47 -0.83 16 17 C -0.11 0.13 5.57 -26.73 -0.15 -0.02 16 18 C -0.11 0.32 5.20 -26.73 -0.14 0.18 16 19 C 0.04 0.09 7.32 -39.25 -0.29 -0.19 16 20 F -0.12 -0.53 17.03 2.25 0.04 -0.49 16 21 C 0.10 0.15 6.61 -39.39 -0.26 -0.11 16 22 F -0.11 -0.31 12.50 2.25 0.03 -0.28 16 23 H 0.38 -0.24 8.38 45.56 0.38 0.14 16 24 H 0.13 -0.32 7.77 -51.93 -0.40 -0.72 16 25 H -0.23 -0.53 5.29 56.52 0.30 -0.23 16 26 H -0.26 -0.72 7.11 56.52 0.40 -0.32 16 27 H 0.15 -0.69 8.00 -52.48 -0.42 -1.11 16 28 H 0.15 -0.66 6.30 -52.49 -0.33 -0.99 16 29 H 0.07 -0.27 7.66 -51.93 -0.40 -0.67 16 30 H 0.07 -0.26 7.66 -51.93 -0.40 -0.66 16 31 H 0.07 -0.02 7.82 -51.93 -0.41 -0.43 16 32 H 0.06 -0.15 8.14 -51.94 -0.42 -0.57 16 33 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 34 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.38 -1.19 9.08 45.56 0.41 -0.78 16 36 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 38 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 39 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 LS Contribution 322.76 15.07 4.86 4.86 Total: 0.00 -6.61 322.76 -8.76 -15.38 By element: Atomic # 1 Polarization: -5.99 SS G_CDS: -4.66 Total: -10.65 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -2.68 Total: -1.01 kcal Atomic # 8 Polarization: -1.27 SS G_CDS: -1.11 Total: -2.38 kcal Atomic # 9 Polarization: -0.83 SS G_CDS: 0.07 Total: -0.77 kcal Atomic # 14 Polarization: -0.19 SS G_CDS: -5.24 Total: -5.43 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -6.61 -8.76 -15.38 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_13025868_16737254.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -168.473 kcal (2) G-P(sol) polarization free energy of solvation -6.612 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -175.084 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.764 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.375 kcal (6) G-S(sol) free energy of system = (1) + (5) -183.848 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds