Wall clock time and date at job start Tue Mar 9 2021 14:27:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38243 * 119.97258 * 2 1 4 4 C 1.50698 * 119.94121 * 0.02562 * 3 2 1 5 5 O 1.42895 * 109.47344 * 75.00291 * 4 3 2 6 6 Si 1.86307 * 109.46922 * 194.99978 * 4 3 2 7 7 C 1.38288 * 120.11190 * 180.02562 * 3 2 1 8 8 C 1.38124 * 120.05648 * 359.76309 * 7 3 2 9 9 C 1.38750 * 119.94218 * 0.51485 * 8 7 3 10 10 O 1.35902 * 120.05888 * 179.74206 * 9 8 7 11 11 C 1.42905 * 116.99615 * 359.71817 * 10 9 8 12 12 C 1.52999 * 109.46921 * 180.02562 * 11 10 9 13 13 H 1.09004 * 112.85054 * 43.81173 * 12 11 10 14 14 C 1.53784 * 113.61344 * 175.00473 * 12 11 10 15 15 C 1.53775 * 87.08142 * 139.98514 * 14 12 11 16 16 H 1.08997 * 113.62071 * 89.19973 * 15 14 12 17 17 O 1.42907 * 113.61244 * 220.01958 * 15 14 12 18 18 C 1.42895 * 113.99876 * 209.99628 * 17 15 14 19 19 C 1.53006 * 109.47036 * 60.00359 * 18 17 15 20 20 C 1.52997 * 109.47356 * 300.00216 * 18 17 15 21 21 C 1.52999 * 109.47283 * 179.97438 * 18 17 15 22 22 C 1.53780 * 113.61853 * 272.50142 * 12 11 10 23 23 C 1.38169 * 119.97263 * 180.02562 * 2 1 3 24 24 H 1.09007 * 109.46972 * 269.97523 * 1 2 3 25 25 H 1.08995 * 109.47304 * 29.97829 * 1 2 3 26 26 H 1.08998 * 109.46812 * 149.98249 * 1 2 3 27 27 H 1.08997 * 109.47438 * 314.99578 * 4 3 2 28 28 H 0.96702 * 114.00397 * 59.99280 * 5 4 3 29 29 H 1.48500 * 109.99852 * 58.67632 * 6 4 3 30 30 H 1.48499 * 110.00012 * 180.02562 * 6 4 3 31 31 H 1.08000 * 119.97154 * 180.02562 * 7 3 2 32 32 H 1.08004 * 120.03149 * 180.27525 * 8 7 3 33 33 H 1.09003 * 109.46899 * 60.00553 * 11 10 9 34 34 H 1.08993 * 109.47562 * 300.00717 * 11 10 9 35 35 H 1.09001 * 113.61470 * 25.43168 * 14 12 11 36 36 H 1.09005 * 113.68839 * 254.54433 * 14 12 11 37 37 H 1.09001 * 109.47002 * 299.99477 * 19 18 17 38 38 H 1.08993 * 109.46955 * 59.99914 * 19 18 17 39 39 H 1.09000 * 109.47050 * 179.97438 * 19 18 17 40 40 H 1.09000 * 109.47140 * 180.02562 * 20 18 17 41 41 H 1.09001 * 109.47230 * 299.99260 * 20 18 17 42 42 H 1.09001 * 109.47375 * 60.00099 * 20 18 17 43 43 H 1.09001 * 109.47362 * 300.00863 * 21 18 17 44 44 H 1.09002 * 109.46716 * 60.00223 * 21 18 17 45 45 H 1.09000 * 109.47486 * 180.02562 * 21 18 17 46 46 H 1.08994 * 113.61633 * 105.46851 * 22 12 11 47 47 H 1.09005 * 113.61363 * 334.57025 * 22 12 11 48 48 H 1.07999 * 120.02736 * 0.02562 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1977 1.1975 0.0000 4 6 1.4422 2.5015 0.0006 5 8 0.9023 2.7386 1.3022 6 14 2.5988 3.8895 -0.4542 7 6 3.5805 1.2009 -0.0005 8 6 4.2752 0.0071 0.0039 9 6 3.5844 -1.1962 -0.0020 10 8 4.2656 -2.3722 -0.0029 11 6 5.6926 -2.2953 -0.0040 12 6 6.2794 -3.7083 -0.0057 13 1 5.7718 -4.3766 -0.7012 14 6 7.8119 -3.7387 -0.1296 15 6 7.7940 -4.8803 0.9005 16 1 7.7020 -5.8702 0.4537 17 8 8.8490 -4.8010 1.8612 18 6 9.2808 -6.0701 2.3562 19 6 9.7919 -6.9239 1.1940 20 6 8.1064 -6.7800 3.0328 21 6 10.4069 -5.8652 3.3715 22 6 6.4600 -4.3020 1.4013 23 6 2.1973 -1.1969 -0.0005 24 1 -0.3633 -0.0004 1.0277 25 1 -0.3633 0.8901 -0.5135 26 1 -0.3633 -0.8898 -0.5141 27 1 0.6311 2.4518 -0.7258 28 1 1.5689 2.7948 2.0004 29 1 3.1917 3.6387 -1.7924 30 1 1.8661 5.1811 -0.4566 31 1 4.1178 2.1378 -0.0001 32 1 5.3553 0.0102 0.0079 33 1 6.0284 -1.7631 0.8860 34 1 6.0271 -1.7622 -0.8939 35 1 8.2973 -2.8320 0.2317 36 1 8.1657 -4.0445 -1.1142 37 1 8.9899 -7.0700 0.4703 38 1 10.6284 -6.4181 0.7120 39 1 10.1216 -7.8917 1.5716 40 1 8.4360 -7.7478 3.4108 41 1 7.7424 -6.1719 3.8609 42 1 7.3045 -6.9261 2.3092 43 1 11.2434 -5.3595 2.8892 44 1 10.0432 -5.2567 4.1996 45 1 10.7366 -6.8332 3.7488 46 1 5.7211 -5.0629 1.6524 47 1 6.5758 -3.5494 2.1813 48 1 1.6573 -2.1322 -0.0014 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_13420936_14598384.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:27:39 Heat of formation + Delta-G solvation = -75.531521 kcal Electronic energy + Delta-G solvation = -25295.263890 eV Core-core repulsion = 21703.690788 eV Total energy + Delta-G solvation = -3591.573102 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.187 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -41.46735 -40.82016 -39.39865 -38.18800 -37.04887 -33.93357 -33.55424 -32.05888 -29.61632 -28.44500 -28.40951 -27.90118 -26.69147 -26.10640 -24.05539 -23.02764 -21.67874 -20.83290 -20.66993 -18.71474 -18.29077 -17.77485 -17.17776 -16.97466 -16.58038 -16.51431 -16.08486 -15.78723 -15.56737 -15.36203 -14.65610 -14.55710 -14.42311 -14.33347 -14.22661 -14.02249 -13.61333 -13.47527 -13.41938 -13.30987 -13.18918 -13.00109 -12.91932 -12.82668 -12.69680 -12.40860 -12.23041 -12.10416 -11.93023 -11.80906 -11.71495 -11.63396 -11.38098 -11.21388 -10.37496 -10.35399 -9.75768 -9.10669 -5.01645 0.33804 0.37085 1.33617 1.67315 2.00466 2.10611 2.68651 2.71386 3.41377 3.50946 3.53309 3.69485 3.71836 3.76009 3.85497 3.86246 3.88286 3.93737 4.04308 4.08809 4.17374 4.20454 4.29402 4.36375 4.43321 4.49883 4.53293 4.61245 4.62431 4.71162 4.72508 4.73380 4.74748 4.78760 4.81974 4.85834 4.88631 4.96134 5.00588 5.07007 5.10782 5.13555 5.26238 5.27962 5.30571 5.33960 5.35987 5.63568 5.78331 6.38267 6.44892 6.62450 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.018 4.018 3 C -0.162 4.162 4 C -0.060 4.060 5 O -0.539 6.539 6 Si 0.677 3.323 7 C -0.068 4.068 8 C -0.212 4.212 9 C 0.143 3.857 10 O -0.312 6.312 11 C 0.072 3.928 12 C -0.110 4.110 13 H 0.104 0.896 14 C -0.127 4.127 15 C 0.062 3.938 16 H 0.092 0.908 17 O -0.361 6.361 18 C 0.105 3.895 19 C -0.179 4.179 20 C -0.176 4.176 21 C -0.139 4.139 22 C -0.147 4.147 23 C -0.156 4.156 24 H 0.080 0.920 25 H 0.070 0.930 26 H 0.066 0.934 27 H 0.112 0.888 28 H 0.378 0.622 29 H -0.258 1.258 30 H -0.255 1.255 31 H 0.130 0.870 32 H 0.131 0.869 33 H 0.067 0.933 34 H 0.065 0.935 35 H 0.094 0.906 36 H 0.077 0.923 37 H 0.059 0.941 38 H 0.065 0.935 39 H 0.068 0.932 40 H 0.066 0.934 41 H 0.064 0.936 42 H 0.058 0.942 43 H 0.063 0.937 44 H 0.063 0.937 45 H 0.071 0.929 46 H 0.072 0.928 47 H 0.091 0.909 48 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.092 -1.730 0.963 3.671 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.018 4.018 3 C -0.163 4.163 4 C -0.171 4.171 5 O -0.345 6.345 6 Si 0.579 3.421 7 C -0.086 4.086 8 C -0.231 4.231 9 C 0.097 3.903 10 O -0.225 6.225 11 C -0.003 4.003 12 C -0.128 4.128 13 H 0.122 0.878 14 C -0.164 4.164 15 C 0.004 3.996 16 H 0.110 0.890 17 O -0.281 6.281 18 C 0.066 3.934 19 C -0.237 4.237 20 C -0.234 4.234 21 C -0.196 4.196 22 C -0.185 4.185 23 C -0.174 4.174 24 H 0.098 0.902 25 H 0.089 0.911 26 H 0.085 0.915 27 H 0.129 0.871 28 H 0.225 0.775 29 H -0.182 1.182 30 H -0.179 1.179 31 H 0.147 0.853 32 H 0.149 0.851 33 H 0.085 0.915 34 H 0.084 0.916 35 H 0.112 0.888 36 H 0.096 0.904 37 H 0.078 0.922 38 H 0.084 0.916 39 H 0.087 0.913 40 H 0.085 0.915 41 H 0.083 0.917 42 H 0.077 0.923 43 H 0.082 0.918 44 H 0.083 0.917 45 H 0.089 0.911 46 H 0.091 0.909 47 H 0.109 0.891 48 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 2.736 -1.121 0.118 2.959 hybrid contribution -0.279 -0.616 -0.343 0.758 sum 2.457 -1.737 -0.225 3.017 Atomic orbital electron populations 1.20859 0.90399 1.02800 1.03203 1.19548 0.96227 0.91267 0.94797 1.20058 0.93577 0.95480 1.07170 1.24928 1.03380 0.99792 0.89007 1.86496 1.37232 1.94528 1.16207 0.94974 0.83783 0.77614 0.85696 1.20723 0.93075 0.97312 0.97472 1.21182 1.00388 0.91901 1.09602 1.18993 0.91690 0.84677 0.94943 1.86082 1.20207 1.28018 1.88230 1.22833 0.77966 0.97836 1.01701 1.22318 0.95744 0.95578 0.99201 0.87805 1.23230 0.93989 0.99865 0.99356 1.23571 0.87312 0.98521 0.90196 0.89005 1.88033 1.52998 1.28591 1.58456 1.21540 0.94259 0.84005 0.93617 1.22474 1.01923 1.00604 0.98663 1.22470 0.98288 1.01124 1.01507 1.21771 0.97157 1.02483 0.98211 1.23614 0.97209 1.01147 0.96531 1.20346 0.90928 0.98694 1.07458 0.90178 0.91085 0.91474 0.87061 0.77508 1.18225 1.17950 0.85272 0.85093 0.91477 0.91644 0.88776 0.90402 0.92234 0.91602 0.91343 0.91527 0.91653 0.92282 0.91762 0.91745 0.91057 0.90936 0.89057 0.85010 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.07 9.54 36.01 0.34 0.28 16 2 C -0.02 -0.03 5.88 -104.64 -0.62 -0.65 16 3 C -0.16 -0.17 5.26 -104.60 -0.55 -0.72 16 4 C -0.06 -0.02 2.04 36.00 0.07 0.05 16 5 O -0.54 -0.31 12.81 -35.23 -0.45 -0.77 16 6 Si 0.68 -0.29 29.91 -169.99 -5.08 -5.38 16 7 C -0.07 -0.02 8.65 -39.60 -0.34 -0.36 16 8 C -0.21 -0.17 9.04 -39.43 -0.36 -0.52 16 9 C 0.14 0.31 6.69 -39.22 -0.26 0.05 16 10 O -0.31 -0.65 10.14 -19.43 -0.20 -0.85 16 11 C 0.07 -0.03 4.58 37.16 0.17 0.14 16 12 C -0.11 0.10 4.01 -89.81 -0.36 -0.26 16 13 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 14 C -0.13 0.14 7.47 -25.92 -0.19 -0.05 16 15 C 0.06 -0.02 2.82 -25.92 -0.07 -0.09 16 16 H 0.09 -0.09 5.54 -51.93 -0.29 -0.38 16 17 O -0.36 -0.53 10.00 -35.23 -0.35 -0.88 16 18 C 0.10 0.00 1.11 -90.62 -0.10 -0.10 16 19 C -0.18 0.15 8.38 37.16 0.31 0.46 16 20 C -0.18 0.11 8.39 37.16 0.31 0.42 16 21 C -0.14 0.06 8.84 37.16 0.33 0.39 16 22 C -0.15 0.05 7.46 -25.92 -0.19 -0.15 16 23 C -0.16 -0.34 9.64 -39.43 -0.38 -0.72 16 24 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 25 H 0.07 0.04 6.23 -51.93 -0.32 -0.29 16 26 H 0.07 -0.02 8.08 -51.93 -0.42 -0.44 16 27 H 0.11 0.09 6.49 -51.93 -0.34 -0.25 16 28 H 0.38 -1.16 8.70 45.56 0.40 -0.76 16 29 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 30 H -0.25 -0.70 7.11 56.52 0.40 -0.30 16 31 H 0.13 -0.29 5.12 -52.49 -0.27 -0.56 16 32 H 0.13 -0.14 6.30 -52.48 -0.33 -0.47 16 33 H 0.07 -0.07 7.35 -51.93 -0.38 -0.45 16 34 H 0.07 -0.08 7.67 -51.93 -0.40 -0.48 16 35 H 0.09 -0.09 8.10 -51.93 -0.42 -0.51 16 36 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 37 H 0.06 -0.07 6.24 -51.93 -0.32 -0.39 16 38 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 39 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 40 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 41 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 42 H 0.06 -0.04 7.02 -51.93 -0.36 -0.41 16 43 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 44 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 45 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 46 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 47 H 0.09 0.03 7.90 -51.93 -0.41 -0.38 16 48 H 0.13 0.18 8.06 -52.49 -0.42 -0.24 16 LS Contribution 375.24 15.07 5.65 5.65 Total: 0.00 -5.27 375.24 -10.46 -15.73 By element: Atomic # 1 Polarization: -3.53 SS G_CDS: -8.14 Total: -11.67 kcal Atomic # 6 Polarization: 0.05 SS G_CDS: -1.89 Total: -1.84 kcal Atomic # 8 Polarization: -1.50 SS G_CDS: -1.00 Total: -2.50 kcal Atomic # 14 Polarization: -0.29 SS G_CDS: -5.08 Total: -5.38 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -5.27 -10.46 -15.73 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_13420936_14598384.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.804 kcal (2) G-P(sol) polarization free energy of solvation -5.266 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.070 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.461 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.728 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.532 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds