Wall clock time and date at job start Tue Mar 9 2021 14:48:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86298 * 1 3 3 C 1.86297 * 109.46975 * 2 1 4 4 C 1.86298 * 109.47214 * 240.00064 * 2 1 3 5 5 C 1.86301 * 109.47309 * 119.99803 * 2 1 3 6 6 O 1.42905 * 109.47040 * 66.60171 * 5 2 1 7 7 C 1.35897 * 116.99764 * 282.06750 * 6 5 2 8 8 C 1.38695 * 120.05018 * 353.84064 * 7 6 5 9 9 C 1.38279 * 119.92941 * 179.97438 * 8 7 6 10 10 Cl 1.73599 * 119.98217 * 179.97438 * 9 8 7 11 11 C 1.38362 * 120.03214 * 0.02562 * 9 8 7 12 12 C 1.38271 * 120.09573 * 359.74621 * 11 9 8 13 13 C 1.38126 * 120.06985 * 0.50937 * 12 11 9 14 14 C 1.50695 * 120.01627 * 179.77100 * 13 12 11 15 15 O 1.42908 * 109.47342 * 254.71959 * 14 13 12 16 16 Si 1.86305 * 109.47252 * 14.71952 * 14 13 12 17 17 H 1.48494 * 109.46833 * 60.00285 * 16 14 13 18 18 H 1.48498 * 109.46977 * 180.02562 * 16 14 13 19 19 H 1.48495 * 109.47054 * 300.00071 * 16 14 13 20 20 H 1.08996 * 109.47211 * 295.56988 * 1 2 3 21 21 H 1.09001 * 109.47173 * 55.57227 * 1 2 3 22 22 H 1.09005 * 109.46658 * 175.56927 * 1 2 3 23 23 H 1.09003 * 109.47474 * 179.97438 * 3 2 1 24 24 H 1.09005 * 109.47584 * 300.00060 * 3 2 1 25 25 H 1.09001 * 109.47272 * 59.99996 * 3 2 1 26 26 H 1.08993 * 109.47140 * 305.00149 * 4 2 1 27 27 H 1.09001 * 109.47306 * 65.00077 * 4 2 1 28 28 H 1.09004 * 109.47363 * 184.99764 * 4 2 1 29 29 H 1.09000 * 109.47193 * 306.60065 * 5 2 1 30 30 H 1.09003 * 109.47151 * 186.60007 * 5 2 1 31 31 H 1.07997 * 120.03213 * 359.96184 * 8 7 6 32 32 H 1.08000 * 119.95440 * 179.97438 * 11 9 8 33 33 H 1.08007 * 119.96473 * 180.27651 * 12 11 9 34 34 H 1.09008 * 109.47339 * 134.72159 * 14 13 12 35 35 H 0.96693 * 113.99394 * 300.00664 * 15 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4839 1.7564 0.0000 4 6 2.4840 -0.8782 -1.5211 5 6 2.4840 -0.8782 1.5212 6 8 2.1384 -2.2628 1.4463 7 6 0.8534 -2.5945 1.7390 8 6 -0.0222 -1.6293 2.2135 9 6 -1.3293 -1.9695 2.5100 10 17 -2.4263 -0.7626 3.1046 11 6 -1.7630 -3.2716 2.3339 12 6 -0.8923 -4.2337 1.8564 13 6 0.4157 -3.8996 1.5639 14 6 1.3650 -4.9504 1.0485 15 8 2.2699 -5.3263 2.0887 16 14 0.3979 -6.4442 0.4969 17 1 -0.5424 -6.0535 -0.5840 18 1 1.3334 -7.4798 -0.0104 19 1 -0.3681 -6.9899 1.6461 20 1 -0.3633 0.4435 0.9270 21 1 -0.3633 0.5810 -0.8477 22 1 -0.3633 -1.0247 -0.0794 23 1 3.5739 1.7565 0.0005 24 1 2.1206 2.2704 -0.8900 25 1 2.1206 2.2703 0.8900 26 1 2.0494 -1.8767 -1.5671 27 1 2.1957 -0.3153 -2.4089 28 1 3.5704 -0.9564 -1.4775 29 1 2.0275 -0.4371 2.4072 30 1 3.5676 -0.7770 1.5821 31 1 0.3165 -0.6132 2.3515 32 1 -2.7840 -3.5360 2.5662 33 1 -1.2342 -5.2485 1.7155 34 1 1.9273 -4.5497 0.2049 35 1 2.8075 -4.5963 2.4250 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_13616168_3095236.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:48:43 Heat of formation + Delta-G solvation = -88.049800 kcal Electronic energy + Delta-G solvation = -17888.229087 eV Core-core repulsion = 15036.240685 eV Total energy + Delta-G solvation = -2851.988403 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 274.070 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -41.61383 -38.78517 -37.86517 -37.01208 -32.73942 -31.43488 -29.85812 -28.58250 -28.51265 -27.94309 -26.58769 -23.45331 -22.65671 -19.46434 -18.29136 -17.70967 -17.07845 -16.71994 -16.26493 -15.90100 -15.54637 -14.95800 -14.61450 -14.43032 -14.15799 -14.07929 -13.96763 -13.58942 -13.57490 -13.41779 -13.31120 -13.21504 -12.99853 -12.58528 -12.35566 -12.12444 -12.05206 -11.71416 -11.24592 -11.06429 -10.98667 -10.96147 -10.85710 -9.87671 -9.16926 -0.05575 0.19264 1.05527 1.22603 1.31874 1.51754 1.54249 1.57296 1.62168 2.00455 2.24261 2.35608 2.45694 3.56248 3.61435 3.87263 3.92713 4.02320 4.11929 4.26605 4.38673 4.50279 4.55494 4.55888 4.63809 4.64514 4.66447 4.67174 4.70489 4.90715 5.11303 5.18938 5.31656 5.42213 5.45084 5.46863 6.15507 6.62823 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.451 4.451 2 Si 0.986 3.014 3 C -0.448 4.448 4 C -0.442 4.442 5 C -0.248 4.248 6 O -0.287 6.287 7 C 0.147 3.853 8 C -0.195 4.195 9 C 0.006 3.994 10 Cl -0.061 7.061 11 C -0.140 4.140 12 C -0.074 4.074 13 C -0.142 4.142 14 C -0.084 4.084 15 O -0.537 6.537 16 Si 1.011 2.989 17 H -0.247 1.247 18 H -0.254 1.254 19 H -0.251 1.251 20 H 0.072 0.928 21 H 0.073 0.927 22 H 0.073 0.927 23 H 0.072 0.928 24 H 0.075 0.925 25 H 0.071 0.929 26 H 0.072 0.928 27 H 0.071 0.929 28 H 0.071 0.929 29 H 0.074 0.926 30 H 0.113 0.887 31 H 0.147 0.853 32 H 0.139 0.861 33 H 0.140 0.860 34 H 0.079 0.921 35 H 0.370 0.630 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.710 1.968 -1.493 2.570 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.558 4.558 2 Si 1.182 2.818 3 C -0.556 4.556 4 C -0.550 4.550 5 C -0.368 4.368 6 O -0.200 6.200 7 C 0.101 3.899 8 C -0.214 4.214 9 C -0.021 4.021 10 Cl -0.032 7.032 11 C -0.159 4.159 12 C -0.092 4.092 13 C -0.143 4.143 14 C -0.192 4.192 15 O -0.342 6.342 16 Si 0.830 3.170 17 H -0.170 1.170 18 H -0.178 1.178 19 H -0.175 1.175 20 H 0.091 0.909 21 H 0.092 0.908 22 H 0.092 0.908 23 H 0.091 0.909 24 H 0.094 0.906 25 H 0.090 0.910 26 H 0.091 0.909 27 H 0.090 0.910 28 H 0.090 0.910 29 H 0.092 0.908 30 H 0.131 0.869 31 H 0.164 0.836 32 H 0.157 0.843 33 H 0.157 0.843 34 H 0.097 0.903 35 H 0.218 0.782 Dipole moment (debyes) X Y Z Total from point charges 0.077 0.652 -1.822 1.936 hybrid contribution 0.396 1.575 0.569 1.721 sum 0.473 2.227 -1.252 2.598 Atomic orbital electron populations 1.26459 1.19554 1.04996 1.04826 0.79892 0.68163 0.66959 0.66758 1.26056 1.06479 1.18064 1.04987 1.25991 1.06359 1.08182 1.14505 1.28251 1.07119 0.85520 1.15894 1.86010 1.23744 1.26726 1.83524 1.18616 0.84189 0.92528 0.94612 1.21204 0.93025 1.00936 1.06235 1.20658 0.90911 0.90534 0.99973 1.98401 1.62848 1.55596 1.86398 1.20952 1.01188 0.90955 1.02769 1.20923 0.91901 0.99685 0.96721 1.19733 0.95735 0.92961 1.05917 1.25223 0.94871 1.05785 0.93308 1.86688 1.54507 1.38524 1.54528 0.84521 0.77861 0.75075 0.79522 1.16998 1.17823 1.17468 0.90917 0.90806 0.90777 0.90927 0.90590 0.90997 0.90905 0.90979 0.91013 0.90766 0.86901 0.83558 0.84274 0.84267 0.90275 0.78220 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.72 7.04 101.05 0.71 1.43 16 2 Si 0.99 -3.13 11.68 -169.99 -1.99 -5.11 16 3 C -0.45 1.21 8.65 101.05 0.87 2.08 16 4 C -0.44 0.78 8.65 101.05 0.87 1.65 16 5 C -0.25 0.59 5.31 101.05 0.54 1.13 16 6 O -0.29 0.07 8.70 -19.42 -0.17 -0.10 16 7 C 0.15 0.09 5.72 -39.22 -0.22 -0.13 16 8 C -0.19 -0.06 5.42 -39.40 -0.21 -0.28 16 9 C 0.01 0.01 6.32 -39.52 -0.25 -0.24 16 10 Cl -0.06 -0.06 28.95 -51.86 -1.50 -1.56 16 11 C -0.14 -0.08 9.83 -39.52 -0.39 -0.47 16 12 C -0.07 -0.05 8.66 -39.61 -0.34 -0.39 16 13 C -0.14 -0.15 5.28 -104.47 -0.55 -0.70 16 14 C -0.08 -0.06 2.33 36.00 0.08 0.03 16 15 O -0.54 -0.94 12.65 -35.23 -0.45 -1.39 16 16 Si 1.01 0.37 25.74 -169.99 -4.37 -4.01 16 17 H -0.25 0.06 7.11 56.52 0.40 0.46 16 18 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 19 H -0.25 -0.20 6.74 56.52 0.38 0.18 16 20 H 0.07 -0.12 6.51 -51.93 -0.34 -0.45 16 21 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 22 H 0.07 -0.04 6.54 -51.93 -0.34 -0.38 16 23 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 24 H 0.07 -0.18 7.96 -51.93 -0.41 -0.60 16 25 H 0.07 -0.20 7.96 -51.93 -0.41 -0.62 16 26 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 27 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 28 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 29 H 0.07 -0.22 6.06 -51.93 -0.31 -0.53 16 30 H 0.11 -0.41 7.96 -51.93 -0.41 -0.83 16 31 H 0.15 -0.19 4.24 -52.49 -0.22 -0.41 16 32 H 0.14 -0.14 8.06 -52.49 -0.42 -0.56 16 33 H 0.14 -0.10 4.88 -52.48 -0.26 -0.36 16 34 H 0.08 -0.03 7.83 -51.92 -0.41 -0.44 16 35 H 0.37 -0.12 8.61 45.56 0.39 0.27 16 LS Contribution 298.32 15.07 4.50 4.50 Total: 0.00 -3.64 298.32 -6.90 -10.55 By element: Atomic # 1 Polarization: -2.95 SS G_CDS: -4.03 Total: -6.99 kcal Atomic # 6 Polarization: 3.01 SS G_CDS: 1.11 Total: 4.12 kcal Atomic # 8 Polarization: -0.87 SS G_CDS: -0.61 Total: -1.49 kcal Atomic # 14 Polarization: -2.76 SS G_CDS: -6.36 Total: -9.12 kcal Atomic # 17 Polarization: -0.06 SS G_CDS: -1.50 Total: -1.56 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -3.64 -6.90 -10.55 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_13616168_3095236.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.502 kcal (2) G-P(sol) polarization free energy of solvation -3.643 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.145 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.905 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -10.547 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.050 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds