Wall clock time and date at job start Tue Mar 9 2021 14:48:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86298 * 1 3 3 C 1.86297 * 109.46975 * 2 1 4 4 C 1.86298 * 109.47214 * 240.00064 * 2 1 3 5 5 C 1.86301 * 109.47309 * 119.99803 * 2 1 3 6 6 O 1.42905 * 109.47040 * 66.60171 * 5 2 1 7 7 C 1.35897 * 116.99764 * 282.06750 * 6 5 2 8 8 C 1.38695 * 120.05018 * 353.84064 * 7 6 5 9 9 C 1.38279 * 119.92941 * 179.97438 * 8 7 6 10 10 Cl 1.73599 * 119.98217 * 179.97438 * 9 8 7 11 11 C 1.38362 * 120.03214 * 0.02562 * 9 8 7 12 12 C 1.38271 * 120.09573 * 359.74621 * 11 9 8 13 13 C 1.38126 * 120.06985 * 0.50937 * 12 11 9 14 14 C 1.50695 * 120.01627 * 179.77100 * 13 12 11 15 15 O 1.42908 * 109.47342 * 254.71959 * 14 13 12 16 16 Si 1.86305 * 109.47252 * 14.71952 * 14 13 12 17 17 H 1.48494 * 109.46833 * 60.00285 * 16 14 13 18 18 H 1.48498 * 109.46977 * 180.02562 * 16 14 13 19 19 H 1.48495 * 109.47054 * 300.00071 * 16 14 13 20 20 H 1.08996 * 109.47211 * 295.56988 * 1 2 3 21 21 H 1.09001 * 109.47173 * 55.57227 * 1 2 3 22 22 H 1.09005 * 109.46658 * 175.56927 * 1 2 3 23 23 H 1.09003 * 109.47474 * 179.97438 * 3 2 1 24 24 H 1.09005 * 109.47584 * 300.00060 * 3 2 1 25 25 H 1.09001 * 109.47272 * 59.99996 * 3 2 1 26 26 H 1.08993 * 109.47140 * 305.00149 * 4 2 1 27 27 H 1.09001 * 109.47306 * 65.00077 * 4 2 1 28 28 H 1.09004 * 109.47363 * 184.99764 * 4 2 1 29 29 H 1.09000 * 109.47193 * 306.60065 * 5 2 1 30 30 H 1.09003 * 109.47151 * 186.60007 * 5 2 1 31 31 H 1.07997 * 120.03213 * 359.96184 * 8 7 6 32 32 H 1.08000 * 119.95440 * 179.97438 * 11 9 8 33 33 H 1.08007 * 119.96473 * 180.27651 * 12 11 9 34 34 H 1.09008 * 109.47339 * 134.72159 * 14 13 12 35 35 H 0.96693 * 113.99394 * 300.00664 * 15 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4839 1.7564 0.0000 4 6 2.4840 -0.8782 -1.5211 5 6 2.4840 -0.8782 1.5212 6 8 2.1384 -2.2628 1.4463 7 6 0.8534 -2.5945 1.7390 8 6 -0.0222 -1.6293 2.2135 9 6 -1.3293 -1.9695 2.5100 10 17 -2.4263 -0.7626 3.1046 11 6 -1.7630 -3.2716 2.3339 12 6 -0.8923 -4.2337 1.8564 13 6 0.4157 -3.8996 1.5639 14 6 1.3650 -4.9504 1.0485 15 8 2.2699 -5.3263 2.0887 16 14 0.3979 -6.4442 0.4969 17 1 -0.5424 -6.0535 -0.5840 18 1 1.3334 -7.4798 -0.0104 19 1 -0.3681 -6.9899 1.6461 20 1 -0.3633 0.4435 0.9270 21 1 -0.3633 0.5810 -0.8477 22 1 -0.3633 -1.0247 -0.0794 23 1 3.5739 1.7565 0.0005 24 1 2.1206 2.2704 -0.8900 25 1 2.1206 2.2703 0.8900 26 1 2.0494 -1.8767 -1.5671 27 1 2.1957 -0.3153 -2.4089 28 1 3.5704 -0.9564 -1.4775 29 1 2.0275 -0.4371 2.4072 30 1 3.5676 -0.7770 1.5821 31 1 0.3165 -0.6132 2.3515 32 1 -2.7840 -3.5360 2.5662 33 1 -1.2342 -5.2485 1.7155 34 1 1.9273 -4.5497 0.2049 35 1 2.8075 -4.5963 2.4250 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_13616168_3095236.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:48:42 Heat of formation + Delta-G solvation = -79.565654 kcal Electronic energy + Delta-G solvation = -17887.861187 eV Core-core repulsion = 15036.240685 eV Total energy + Delta-G solvation = -2851.620503 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 274.070 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -41.58449 -38.74751 -37.91647 -37.05957 -32.75024 -31.41200 -29.68063 -28.40387 -28.33679 -27.79108 -26.60958 -23.41915 -22.66641 -19.43547 -18.33613 -17.68008 -17.03912 -16.67485 -16.23726 -15.90980 -15.54239 -14.90760 -14.59053 -14.38700 -14.01965 -13.94543 -13.83128 -13.52326 -13.43747 -13.24365 -13.23261 -13.06653 -12.92282 -12.48496 -12.35800 -12.15321 -12.09004 -11.78584 -11.26608 -11.02250 -10.87195 -10.79667 -10.72115 -9.89071 -9.13764 -0.07998 0.19484 1.01724 1.19648 1.49666 1.52544 1.54934 1.74601 1.82576 1.96110 2.36918 2.42204 2.56767 3.56934 3.63311 3.92671 3.96952 4.03949 4.26236 4.28714 4.42230 4.65046 4.71142 4.75997 4.76628 4.79971 4.81680 4.82037 4.87192 4.91196 5.11754 5.18602 5.45715 5.52509 5.60953 5.61766 6.21858 6.64755 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.466 4.466 2 Si 1.050 2.950 3 C -0.457 4.457 4 C -0.459 4.459 5 C -0.264 4.264 6 O -0.293 6.293 7 C 0.144 3.856 8 C -0.197 4.197 9 C -0.004 4.004 10 Cl -0.065 7.065 11 C -0.147 4.147 12 C -0.082 4.082 13 C -0.154 4.154 14 C -0.087 4.087 15 O -0.551 6.551 16 Si 1.027 2.973 17 H -0.237 1.237 18 H -0.273 1.273 19 H -0.258 1.258 20 H 0.072 0.928 21 H 0.072 0.928 22 H 0.062 0.938 23 H 0.076 0.924 24 H 0.073 0.927 25 H 0.075 0.925 26 H 0.064 0.936 27 H 0.070 0.930 28 H 0.073 0.927 29 H 0.082 0.918 30 H 0.129 0.871 31 H 0.160 0.840 32 H 0.151 0.849 33 H 0.149 0.851 34 H 0.088 0.912 35 H 0.377 0.623 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.998 2.545 -1.422 3.081 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.572 4.572 2 Si 1.242 2.758 3 C -0.565 4.565 4 C -0.566 4.566 5 C -0.383 4.383 6 O -0.206 6.206 7 C 0.097 3.903 8 C -0.216 4.216 9 C -0.030 4.030 10 Cl -0.036 7.036 11 C -0.166 4.166 12 C -0.100 4.100 13 C -0.155 4.155 14 C -0.195 4.195 15 O -0.358 6.358 16 Si 0.848 3.152 17 H -0.159 1.159 18 H -0.198 1.198 19 H -0.182 1.182 20 H 0.091 0.909 21 H 0.092 0.908 22 H 0.081 0.919 23 H 0.095 0.905 24 H 0.092 0.908 25 H 0.094 0.906 26 H 0.083 0.917 27 H 0.089 0.911 28 H 0.092 0.908 29 H 0.100 0.900 30 H 0.147 0.853 31 H 0.177 0.823 32 H 0.169 0.831 33 H 0.167 0.833 34 H 0.106 0.894 35 H 0.226 0.774 Dipole moment (debyes) X Y Z Total from point charges 0.354 1.236 -1.760 2.179 hybrid contribution 0.332 1.405 0.535 1.539 sum 0.686 2.640 -1.225 2.990 Atomic orbital electron populations 1.26665 1.21517 1.04224 1.04827 0.78913 0.65939 0.65875 0.65030 1.26148 1.06874 1.18341 1.05088 1.26210 1.06622 1.08063 1.15744 1.28537 1.08357 0.84623 1.16806 1.86008 1.23206 1.27976 1.83366 1.18674 0.84605 0.92480 0.94494 1.21362 0.92807 1.01573 1.05875 1.20786 0.91184 0.90669 1.00409 1.98396 1.63010 1.55744 1.86485 1.21140 1.01843 0.90890 1.02680 1.21098 0.91933 1.00244 0.96753 1.19862 0.96000 0.93330 1.06311 1.25293 0.94912 1.05924 0.93343 1.86658 1.54875 1.39329 1.54931 0.84316 0.77365 0.74233 0.79316 1.15941 1.19795 1.18203 0.90880 0.90850 0.91906 0.90483 0.90806 0.90623 0.91719 0.91074 0.90807 0.90002 0.85342 0.82281 0.83116 0.83321 0.89375 0.77380 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.47 1.43 7.04 113.37 0.80 2.23 16 2 Si 1.05 -7.13 11.68 68.60 0.80 -6.33 16 3 C -0.46 2.86 8.65 113.37 0.98 3.84 16 4 C -0.46 1.59 8.65 113.37 0.98 2.57 16 5 C -0.26 1.48 5.31 113.37 0.60 2.09 16 6 O -0.29 0.23 8.70 -92.39 -0.80 -0.58 16 7 C 0.14 0.19 5.72 22.50 0.13 0.32 16 8 C -0.20 -0.13 5.42 22.39 0.12 0.00 16 9 C 0.00 -0.01 6.32 22.31 0.14 0.13 16 10 Cl -0.07 -0.14 28.95 -2.72 -0.08 -0.22 16 11 C -0.15 -0.20 9.83 22.31 0.22 0.02 16 12 C -0.08 -0.13 8.66 22.25 0.19 0.06 16 13 C -0.15 -0.36 5.28 -19.77 -0.10 -0.47 16 14 C -0.09 -0.15 2.33 71.23 0.17 0.02 16 15 O -0.55 -2.15 12.65 -148.98 -1.89 -4.03 16 16 Si 1.03 1.16 25.74 68.60 1.77 2.93 16 17 H -0.24 0.16 7.11 99.48 0.71 0.87 16 18 H -0.27 -1.10 7.11 99.48 0.71 -0.39 16 19 H -0.26 -0.53 6.74 99.48 0.67 0.14 16 20 H 0.07 -0.24 6.51 -2.39 -0.02 -0.25 16 21 H 0.07 -0.23 7.96 -2.39 -0.02 -0.25 16 22 H 0.06 -0.03 6.54 -2.38 -0.02 -0.05 16 23 H 0.08 -0.52 7.96 -2.39 -0.02 -0.54 16 24 H 0.07 -0.40 7.96 -2.38 -0.02 -0.42 16 25 H 0.07 -0.50 7.96 -2.39 -0.02 -0.52 16 26 H 0.06 -0.11 7.96 -2.39 -0.02 -0.13 16 27 H 0.07 -0.24 7.96 -2.39 -0.02 -0.26 16 28 H 0.07 -0.29 7.96 -2.39 -0.02 -0.31 16 29 H 0.08 -0.57 6.06 -2.39 -0.01 -0.58 16 30 H 0.13 -1.12 7.96 -2.39 -0.02 -1.14 16 31 H 0.16 -0.47 4.24 -2.91 -0.01 -0.48 16 32 H 0.15 -0.28 8.06 -2.91 -0.02 -0.31 16 33 H 0.15 -0.18 4.88 -2.91 -0.01 -0.20 16 34 H 0.09 -0.05 7.83 -2.38 -0.02 -0.07 16 35 H 0.38 -0.11 8.61 -74.06 -0.64 -0.75 16 Total: 0.00 -8.27 298.32 5.21 -3.06 By element: Atomic # 1 Polarization: -6.81 SS G_CDS: 1.18 Total: -5.63 kcal Atomic # 6 Polarization: 6.58 SS G_CDS: 4.23 Total: 10.81 kcal Atomic # 8 Polarization: -1.92 SS G_CDS: -2.69 Total: -4.61 kcal Atomic # 14 Polarization: -5.97 SS G_CDS: 2.57 Total: -3.40 kcal Atomic # 17 Polarization: -0.14 SS G_CDS: -0.08 Total: -0.22 kcal Total: -8.27 5.21 -3.06 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_13616168_3095236.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.505 kcal (2) G-P(sol) polarization free energy of solvation -8.266 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.771 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.205 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -3.061 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.566 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds