Wall clock time and date at job start Tue Mar 9 2021 15:07:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 C 1.53005 * 109.46939 * 2 1 4 4 C 1.52995 * 109.47373 * 240.00058 * 2 1 3 5 5 O 1.45201 * 109.47159 * 119.99860 * 2 1 3 6 6 C 1.34626 * 117.00108 * 60.00650 * 5 2 1 7 7 O 1.21513 * 119.99942 * 359.97438 * 6 5 2 8 8 N 1.34776 * 120.00021 * 180.02562 * 6 5 2 9 9 C 1.46506 * 119.99831 * 179.97438 * 8 6 5 10 10 H 1.08997 * 112.85420 * 23.80069 * 9 8 6 11 11 C 1.53781 * 113.61405 * 154.99784 * 9 8 6 12 12 C 1.53786 * 87.17350 * 140.02258 * 11 9 8 13 13 H 1.08993 * 113.61491 * 89.15923 * 12 11 9 14 14 C 1.52999 * 113.61361 * 220.06273 * 12 11 9 15 15 O 1.42904 * 109.47219 * 184.99801 * 14 12 11 16 16 C 1.35945 * 116.99754 * 180.02562 * 15 14 12 17 17 C 1.38683 * 120.01321 * 180.02562 * 16 15 14 18 18 C 1.50695 * 119.99854 * 359.94860 * 17 16 15 19 19 O 1.42902 * 109.47280 * 285.00568 * 18 17 16 20 20 Si 1.86295 * 109.47547 * 165.00143 * 18 17 16 21 21 C 1.38213 * 120.01024 * 179.97438 * 17 16 15 22 22 C 1.38363 * 120.05289 * 359.97438 * 21 17 16 23 23 F 1.35103 * 119.97704 * 180.02562 * 22 21 17 24 24 C 1.38691 * 120.04356 * 359.97438 * 22 21 17 25 25 F 1.35097 * 120.00953 * 180.02562 * 24 22 21 26 26 C 1.38316 * 119.98349 * 359.79234 * 24 22 21 27 27 C 1.53782 * 113.68817 * 252.53351 * 9 8 6 28 28 H 1.09005 * 109.47550 * 299.99843 * 1 2 3 29 29 H 1.08996 * 109.47695 * 60.00060 * 1 2 3 30 30 H 1.09002 * 109.47152 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47457 * 179.97438 * 3 2 1 32 32 H 1.09004 * 109.47113 * 300.00297 * 3 2 1 33 33 H 1.09005 * 109.46871 * 59.99741 * 3 2 1 34 34 H 1.09002 * 109.46975 * 300.00100 * 4 2 1 35 35 H 1.09004 * 109.46806 * 59.99626 * 4 2 1 36 36 H 1.09005 * 109.47447 * 179.97438 * 4 2 1 37 37 H 0.96990 * 120.00286 * 359.97438 * 8 6 5 38 38 H 1.09002 * 113.61445 * 254.61257 * 11 9 8 39 39 H 1.09002 * 113.61408 * 25.42988 * 11 9 8 40 40 H 1.09002 * 109.47053 * 305.00261 * 14 12 11 41 41 H 1.09004 * 109.47121 * 64.99898 * 14 12 11 42 42 H 1.09003 * 109.46840 * 45.00452 * 18 17 16 43 43 H 0.96701 * 113.99929 * 59.99589 * 19 18 17 44 44 H 1.48498 * 110.00404 * 178.68257 * 20 18 17 45 45 H 1.48501 * 110.00211 * 300.00567 * 20 18 17 46 46 H 1.08002 * 119.97374 * 180.02562 * 21 17 16 47 47 H 1.08008 * 120.02854 * 180.25178 * 26 24 22 48 48 H 1.08997 * 113.61668 * 334.55345 * 27 9 8 49 49 H 1.08998 * 113.61674 * 105.37854 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0139 -0.6845 1.1856 6 6 1.6523 -1.9722 1.3383 7 8 0.9510 -2.5094 0.5040 8 7 2.0673 -2.6653 2.4172 9 6 1.6733 -4.0665 2.5836 10 1 1.4210 -4.5503 1.6401 11 6 2.6462 -4.8809 3.4526 12 6 1.4100 -5.5558 4.0700 13 1 1.0856 -6.4474 3.5336 14 6 1.5224 -5.7770 5.5798 15 8 0.3848 -6.5093 6.0399 16 6 0.3286 -6.7914 7.3686 17 6 -0.7474 -7.4994 7.8826 18 6 -1.8552 -7.9552 6.9683 19 8 -2.6748 -6.8379 6.6192 20 14 -2.8903 -9.2370 7.8378 21 6 -0.8042 -7.7866 9.2333 22 6 0.2123 -7.3688 10.0739 23 9 0.1554 -7.6508 11.3940 24 6 1.2899 -6.6614 9.5621 25 9 2.2822 -6.2542 10.3834 26 6 1.3508 -6.3773 8.2099 27 6 0.6262 -4.2868 3.6881 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1299 1.4427 0.0005 32 1 1.6765 1.9564 -0.8900 33 1 1.6765 1.9564 0.8900 34 1 1.6766 -1.7489 -1.2492 35 1 1.6766 -0.2073 -2.1392 36 1 3.1300 -0.7208 -1.2494 37 1 2.6268 -2.2364 3.0834 38 1 3.2761 -5.5627 2.8811 39 1 3.2119 -4.2747 4.1602 40 1 2.4297 -6.3404 5.7978 41 1 1.5630 -4.8127 6.0863 42 1 -1.4257 -8.3873 6.0644 43 1 -2.2006 -6.1299 6.1620 44 1 -4.0053 -9.6715 6.9584 45 1 -2.0496 -10.4043 8.2063 46 1 -1.6423 -8.3384 9.6329 47 1 2.1917 -5.8300 7.8099 48 1 0.6385 -3.5185 4.4611 49 1 -0.3750 -4.4876 3.3068 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_14425792_15734236.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:07:48 Heat of formation + Delta-G solvation = -189.679276 kcal Electronic energy + Delta-G solvation = -33947.365161 eV Core-core repulsion = 28899.600047 eV Total energy + Delta-G solvation = -5047.765115 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.163 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -50.52438 -49.57856 -41.97346 -41.66572 -40.47129 -38.71100 -37.79181 -37.41027 -35.35462 -34.27963 -32.75972 -31.26942 -29.48216 -28.35107 -28.31078 -27.03270 -26.78855 -25.36562 -23.98639 -23.06694 -22.41987 -21.47741 -20.69542 -19.87345 -19.10582 -18.94032 -18.70983 -18.00422 -17.76424 -17.62092 -17.28232 -17.14395 -17.04675 -16.75822 -16.36317 -16.00756 -15.91026 -15.72700 -15.54851 -15.37447 -15.32437 -15.26718 -14.48802 -14.43092 -14.32809 -14.11060 -13.93273 -13.78725 -13.46229 -13.33982 -13.15879 -13.04836 -12.92636 -12.86607 -12.85040 -12.56551 -12.45759 -12.25103 -12.16708 -12.01754 -11.99163 -11.56378 -11.43476 -11.32567 -11.23610 -10.99645 -10.31324 -10.23107 -9.39639 -4.94361 -0.39799 -0.22905 1.13825 1.30945 1.59128 1.68999 1.83246 1.96545 2.02600 2.60510 3.03414 3.06053 3.13218 3.20123 3.23033 3.36486 3.48987 3.51017 3.66752 3.75214 3.80161 3.80903 3.89596 3.92750 3.94829 3.97153 4.11514 4.29825 4.36386 4.38390 4.42730 4.45434 4.47656 4.54158 4.60795 4.64161 4.67591 4.69192 4.75958 4.80548 4.82627 4.84382 4.90819 4.97943 5.06861 5.26352 5.34120 5.34394 5.43652 5.56628 5.91267 6.35796 6.49933 7.38002 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.651 3.349 7 O -0.565 6.565 8 N -0.703 5.703 9 C 0.141 3.859 10 H 0.123 0.877 11 C -0.136 4.136 12 C -0.107 4.107 13 H 0.110 0.890 14 C 0.066 3.934 15 O -0.302 6.302 16 C 0.163 3.837 17 C -0.128 4.128 18 C -0.068 4.068 19 O -0.531 6.531 20 Si 0.739 3.261 21 C -0.077 4.077 22 C 0.040 3.960 23 F -0.123 7.123 24 C 0.115 3.885 25 F -0.121 7.121 26 C -0.218 4.218 27 C -0.147 4.147 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.087 0.913 31 H 0.067 0.933 32 H 0.082 0.918 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.406 0.594 38 H 0.086 0.914 39 H 0.093 0.907 40 H 0.071 0.929 41 H 0.071 0.929 42 H 0.081 0.919 43 H 0.368 0.632 44 H -0.251 1.251 45 H -0.247 1.247 46 H 0.159 0.841 47 H 0.153 0.847 48 H 0.089 0.911 49 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.165 1.791 -0.751 2.908 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.404 3.596 7 O -0.454 6.454 8 N -0.361 5.361 9 C 0.037 3.963 10 H 0.141 0.859 11 C -0.174 4.174 12 C -0.126 4.126 13 H 0.129 0.871 14 C -0.008 4.008 15 O -0.215 6.215 16 C 0.117 3.883 17 C -0.129 4.129 18 C -0.177 4.177 19 O -0.337 6.337 20 Si 0.637 3.363 21 C -0.095 4.095 22 C 0.020 3.980 23 F -0.102 7.102 24 C 0.095 3.905 25 F -0.099 7.099 26 C -0.237 4.237 27 C -0.186 4.186 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.106 0.894 31 H 0.086 0.914 32 H 0.101 0.899 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.091 0.909 36 H 0.079 0.921 37 H 0.242 0.758 38 H 0.105 0.895 39 H 0.111 0.889 40 H 0.089 0.911 41 H 0.089 0.911 42 H 0.098 0.902 43 H 0.216 0.784 44 H -0.175 1.175 45 H -0.172 1.172 46 H 0.176 0.824 47 H 0.171 0.829 48 H 0.108 0.892 49 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 0.969 0.400 -1.069 1.497 hybrid contribution 1.957 0.943 -0.427 2.214 sum 2.926 1.343 -1.496 3.550 Atomic orbital electron populations 1.22522 0.93806 1.05063 1.02747 1.22123 0.94469 0.91559 0.81821 1.21884 1.02327 0.92349 1.03370 1.22525 1.01596 1.03442 0.96571 1.86305 1.71475 1.23454 1.46780 1.18165 0.78668 0.80662 0.82087 1.90921 1.40799 1.70404 1.43270 1.44728 1.55588 1.12089 1.23680 1.22482 0.95444 0.79044 0.99298 0.85929 1.23402 0.96436 0.98822 0.98774 1.22379 0.98048 0.99132 0.93035 0.87143 1.22988 0.87315 0.95748 0.94785 1.86098 1.45080 1.70832 1.19523 1.18430 0.92751 0.93950 0.83189 1.19600 0.96766 1.02462 0.94120 1.25328 0.95542 0.96773 1.00013 1.86755 1.37017 1.29857 1.80038 0.93032 0.80523 0.74986 0.87797 1.20735 0.97759 0.99392 0.91601 1.17412 0.96760 1.04414 0.79458 1.91571 1.96330 1.91898 1.30363 1.17355 0.86335 0.98552 0.88266 1.91577 1.58715 1.88111 1.71482 1.21101 1.02316 1.08434 0.91877 1.23668 0.99654 0.96680 0.98622 0.92107 0.90904 0.89420 0.91397 0.89896 0.91391 0.89442 0.90896 0.92122 0.75839 0.89507 0.88875 0.91060 0.91071 0.90159 0.78426 1.17505 1.17184 0.82365 0.82901 0.89218 0.89965 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.20 8.37 37.15 0.31 0.11 16 2 C 0.14 0.14 1.13 -90.62 -0.10 0.03 16 3 C -0.14 0.14 8.85 37.16 0.33 0.47 16 4 C -0.18 -0.19 8.37 37.16 0.31 0.13 16 5 O -0.37 -0.71 9.94 -40.29 -0.40 -1.11 16 6 C 0.65 1.36 8.06 54.05 0.44 1.79 16 7 O -0.57 -2.53 11.48 -19.28 -0.22 -2.75 16 8 N -0.70 0.84 5.36 -57.93 -0.31 0.53 16 9 C 0.14 -0.33 4.24 -67.11 -0.28 -0.61 16 10 H 0.12 -0.09 7.46 -51.93 -0.39 -0.48 16 11 C -0.14 0.62 7.39 -25.92 -0.19 0.43 16 12 C -0.11 0.44 4.02 -89.71 -0.36 0.08 16 13 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 14 C 0.07 -0.26 4.58 37.16 0.17 -0.09 16 15 O -0.30 0.51 9.03 -19.57 -0.18 0.34 16 16 C 0.16 -0.12 6.61 -39.24 -0.26 -0.38 16 17 C -0.13 0.04 5.28 -104.47 -0.55 -0.51 16 18 C -0.07 0.02 2.33 36.00 0.08 0.10 16 19 O -0.53 -0.27 12.65 -35.23 -0.45 -0.72 16 20 Si 0.74 -0.53 30.17 -169.99 -5.13 -5.66 16 21 C -0.08 0.03 8.63 -39.54 -0.34 -0.31 16 22 C 0.04 0.05 7.30 -39.37 -0.29 -0.24 16 23 F -0.12 -0.31 17.18 2.25 0.04 -0.27 16 24 C 0.12 0.12 7.30 -39.39 -0.29 -0.17 16 25 F -0.12 -0.28 17.18 2.25 0.04 -0.25 16 26 C -0.22 0.19 9.01 -39.38 -0.35 -0.17 16 27 C -0.15 0.45 7.44 -25.82 -0.19 0.26 16 28 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 29 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 30 H 0.09 0.28 5.88 -51.93 -0.31 -0.03 16 31 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 32 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 33 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 34 H 0.09 0.27 5.88 -51.93 -0.31 -0.04 16 35 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 36 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 37 H 0.41 -1.33 8.84 -40.82 -0.36 -1.69 16 38 H 0.09 -0.40 8.14 -51.93 -0.42 -0.83 16 39 H 0.09 -0.53 8.08 -51.93 -0.42 -0.95 16 40 H 0.07 -0.33 7.65 -51.93 -0.40 -0.72 16 41 H 0.07 -0.34 7.38 -51.93 -0.38 -0.72 16 42 H 0.08 -0.03 7.82 -51.93 -0.41 -0.44 16 43 H 0.37 -0.57 8.60 45.56 0.39 -0.17 16 44 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 45 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 46 H 0.16 -0.41 5.13 -52.49 -0.27 -0.68 16 47 H 0.15 -0.46 6.30 -52.48 -0.33 -0.79 16 48 H 0.09 -0.30 7.90 -51.93 -0.41 -0.71 16 49 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 LS Contribution 404.46 15.07 6.10 6.10 Total: 0.00 -6.55 404.46 -9.09 -15.64 By element: Atomic # 1 Polarization: -5.77 SS G_CDS: -7.01 Total: -12.78 kcal Atomic # 6 Polarization: 2.49 SS G_CDS: -1.57 Total: 0.92 kcal Atomic # 7 Polarization: 0.84 SS G_CDS: -0.31 Total: 0.53 kcal Atomic # 8 Polarization: -2.99 SS G_CDS: -1.24 Total: -4.24 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 0.08 Total: -0.52 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: -5.13 Total: -5.66 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -6.55 -9.09 -15.64 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_14425792_15734236.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -174.035 kcal (2) G-P(sol) polarization free energy of solvation -6.553 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -180.588 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.091 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.644 kcal (6) G-S(sol) free energy of system = (1) + (5) -189.679 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds