Wall clock time and date at job start Tue Mar 9 2021 15:56:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52994 * 109.47404 * 2 1 4 4 C 1.53002 * 109.46956 * 239.99495 * 2 1 3 5 5 O 1.45200 * 109.46817 * 119.99797 * 2 1 3 6 6 C 1.34636 * 117.00020 * 59.99962 * 5 2 1 7 7 O 1.21504 * 120.00004 * 359.97438 * 6 5 2 8 8 N 1.34777 * 120.00060 * 179.97438 * 6 5 2 9 9 C 1.46495 * 120.00220 * 179.97438 * 8 6 5 10 10 H 1.09004 * 112.85218 * 336.19332 * 9 8 6 11 11 C 1.53952 * 113.54082 * 107.50187 * 9 8 6 12 12 C 1.53781 * 87.01899 * 89.19193 * 11 9 8 13 13 H 1.09005 * 113.61247 * 270.77483 * 12 11 9 14 14 C 1.52996 * 113.61773 * 139.95652 * 12 11 9 15 15 O 1.42905 * 109.47410 * 85.86001 * 14 12 11 16 16 C 1.35977 * 116.99798 * 180.02562 * 15 14 12 17 17 C 1.38655 * 119.98376 * 180.02562 * 16 15 14 18 18 C 1.50705 * 120.00534 * 0.02562 * 17 16 15 19 19 O 1.42899 * 109.46991 * 123.51558 * 18 17 16 20 20 Si 1.86295 * 109.47391 * 243.52153 * 18 17 16 21 21 C 1.38530 * 119.99277 * 180.02562 * 17 16 15 22 22 C 1.39260 * 119.87777 * 359.97438 * 21 17 16 23 23 C 1.38526 * 119.91902 * 0.03759 * 22 21 17 24 24 C 1.38219 * 120.10292 * 359.96815 * 23 22 21 25 25 O 1.36603 * 108.61585 * 179.97438 * 22 21 17 26 26 C 1.43983 * 105.47424 * 17.28504 * 25 22 21 27 27 O 1.36505 * 131.47162 * 179.97438 * 21 17 16 28 28 C 1.53777 * 87.17458 * 25.36105 * 12 11 9 29 29 H 1.09001 * 109.47273 * 300.00612 * 1 2 3 30 30 H 1.09005 * 109.46715 * 59.99737 * 1 2 3 31 31 H 1.08994 * 109.47545 * 180.02562 * 1 2 3 32 32 H 1.09005 * 109.47127 * 180.02562 * 3 2 1 33 33 H 1.09005 * 109.47399 * 299.99844 * 3 2 1 34 34 H 1.08998 * 109.47814 * 59.99778 * 3 2 1 35 35 H 1.08994 * 109.47081 * 300.00392 * 4 2 1 36 36 H 1.08998 * 109.46943 * 60.00171 * 4 2 1 37 37 H 1.09005 * 109.46799 * 180.02562 * 4 2 1 38 38 H 0.97003 * 119.99898 * 359.97438 * 8 6 5 39 39 H 1.08999 * 113.66379 * 334.66860 * 11 9 8 40 40 H 1.08996 * 113.61669 * 203.70796 * 11 9 8 41 41 H 1.09001 * 109.47209 * 325.86073 * 14 12 11 42 42 H 1.09004 * 109.47495 * 205.86403 * 14 12 11 43 43 H 1.09002 * 109.47092 * 3.52163 * 18 17 16 44 44 H 0.96694 * 114.00446 * 300.00641 * 19 18 17 45 45 H 1.48507 * 109.99537 * 294.56542 * 20 18 17 46 46 H 1.48501 * 110.00243 * 55.88201 * 20 18 17 47 47 H 1.07996 * 119.95244 * 179.97438 * 23 22 21 48 48 H 1.07999 * 119.96315 * 179.97438 * 24 23 22 49 49 H 1.09001 * 110.57129 * 91.43003 * 26 25 22 50 50 H 1.08993 * 110.57628 * 214.15377 * 26 25 22 51 51 H 1.09002 * 113.61440 * 89.15599 * 28 12 11 52 52 H 1.09000 * 113.61850 * 219.97556 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7214 -1.2492 5 8 2.0139 -0.6845 1.1856 6 6 1.6521 -1.9723 1.3384 7 8 0.9508 -2.5094 0.5042 8 7 2.0679 -2.6656 2.4168 9 6 1.6738 -4.0667 2.5834 10 1 0.7589 -4.3159 2.0457 11 6 2.8239 -5.0616 2.3439 12 6 3.1499 -4.9213 3.8402 13 1 3.8468 -4.1128 4.0613 14 6 3.5394 -6.2410 4.5091 15 8 4.9385 -6.4708 4.3305 16 6 5.4505 -7.6100 4.8683 17 6 6.8007 -7.8945 4.7324 18 6 7.7007 -6.9410 3.9892 19 8 8.7768 -6.5408 4.8400 20 14 8.3858 -7.7852 2.4764 21 6 7.3224 -9.0552 5.2797 22 6 6.4885 -9.9341 5.9664 23 6 5.1401 -9.6457 6.0994 24 6 4.6218 -8.4870 5.5523 25 8 7.2349 -10.9912 6.4041 26 6 8.6038 -10.5507 6.3324 27 8 8.5904 -9.5605 5.2875 28 6 1.6753 -4.5372 4.0475 29 1 -0.3634 0.5139 0.8899 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3634 -1.0276 0.0005 32 1 3.1301 1.4424 -0.0005 33 1 1.6768 1.9563 -0.8900 34 1 1.6768 1.9564 0.8899 35 1 1.6766 -1.7490 -1.2491 36 1 1.6766 -0.2076 -2.1392 37 1 3.1300 -0.7218 -1.2490 38 1 2.6281 -2.2369 3.0826 39 1 3.6057 -4.6772 1.6888 40 1 2.4869 -6.0592 2.0622 41 1 2.9764 -7.0575 4.0570 42 1 3.3127 -6.1894 5.5741 43 1 7.1298 -6.0627 3.6879 44 1 8.4932 -6.0936 5.6490 45 1 9.2730 -8.9063 2.8785 46 1 7.2754 -8.2941 1.6319 47 1 4.4929 -10.3271 6.6314 48 1 3.5702 -8.2646 5.6570 49 1 8.9127 -10.1049 7.2779 50 1 9.2598 -11.3803 6.0691 51 1 1.0235 -5.3911 4.2323 52 1 1.5310 -3.7310 4.7667 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_15096578_15734082.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:56:11 Heat of formation + Delta-G solvation = -151.671360 kcal Electronic energy + Delta-G solvation = -35525.261637 eV Core-core repulsion = 30652.462096 eV Total energy + Delta-G solvation = -4872.799541 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -43.25511 -41.91862 -41.20694 -40.24991 -38.24528 -37.75556 -37.37231 -36.83957 -35.27276 -34.10810 -32.52160 -30.62753 -29.33297 -28.32556 -28.28535 -26.98288 -26.80612 -26.72212 -25.03466 -23.69837 -23.18054 -22.65888 -21.11582 -20.45652 -19.81212 -19.22056 -18.98661 -18.74245 -18.00839 -17.64416 -17.51720 -17.28691 -17.03990 -16.78735 -16.48841 -16.46214 -15.78498 -15.70253 -15.52168 -15.37323 -15.17391 -15.07887 -14.89061 -14.37955 -14.25047 -14.20718 -13.91070 -13.83995 -13.80513 -13.58320 -13.46342 -13.39327 -13.11676 -12.86045 -12.82646 -12.78265 -12.65123 -12.39137 -12.26082 -12.11221 -11.95530 -11.82381 -11.56500 -11.30457 -11.28329 -11.27968 -11.04288 -10.97958 -10.21532 -9.72547 -8.88325 -4.76999 -0.08146 0.07547 1.13850 1.45750 1.52471 1.80467 1.85530 2.04012 2.23471 2.41253 2.53425 3.07487 3.19365 3.25103 3.27984 3.58039 3.59118 3.62033 3.68185 3.75965 3.77809 3.83495 3.86902 3.95095 3.97316 3.98964 4.08422 4.14506 4.18060 4.29015 4.37248 4.43063 4.49487 4.50795 4.56850 4.63464 4.72785 4.74313 4.78523 4.81893 4.85684 4.89191 4.91081 4.93404 4.96600 4.97105 5.04865 5.09317 5.10187 5.32201 5.36830 5.47394 5.59873 5.95246 6.17058 6.38134 6.62853 7.40793 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.364 6.364 6 C 0.653 3.347 7 O -0.564 6.564 8 N -0.695 5.695 9 C 0.138 3.862 10 H 0.111 0.889 11 C -0.147 4.147 12 C -0.111 4.111 13 H 0.104 0.896 14 C 0.067 3.933 15 O -0.303 6.303 16 C 0.155 3.845 17 C -0.142 4.142 18 C -0.064 4.064 19 O -0.532 6.532 20 Si 0.741 3.259 21 C 0.091 3.909 22 C -0.008 4.008 23 C -0.053 4.053 24 C -0.202 4.202 25 O -0.307 6.307 26 C 0.210 3.790 27 O -0.290 6.290 28 C -0.135 4.135 29 H 0.060 0.940 30 H 0.072 0.928 31 H 0.087 0.913 32 H 0.067 0.933 33 H 0.082 0.918 34 H 0.067 0.933 35 H 0.087 0.913 36 H 0.072 0.928 37 H 0.060 0.940 38 H 0.407 0.593 39 H 0.079 0.921 40 H 0.096 0.904 41 H 0.070 0.930 42 H 0.069 0.931 43 H 0.084 0.916 44 H 0.363 0.637 45 H -0.242 1.242 46 H -0.255 1.255 47 H 0.142 0.858 48 H 0.146 0.854 49 H 0.087 0.913 50 H 0.134 0.866 51 H 0.103 0.897 52 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.577 2.982 2.305 4.086 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.407 3.593 7 O -0.452 6.452 8 N -0.354 5.354 9 C 0.033 3.967 10 H 0.129 0.871 11 C -0.185 4.185 12 C -0.130 4.130 13 H 0.123 0.877 14 C -0.008 4.008 15 O -0.216 6.216 16 C 0.109 3.891 17 C -0.144 4.144 18 C -0.173 4.173 19 O -0.336 6.336 20 Si 0.638 3.362 21 C 0.046 3.954 22 C -0.052 4.052 23 C -0.072 4.072 24 C -0.221 4.221 25 O -0.223 6.223 26 C 0.098 3.902 27 O -0.206 6.206 28 C -0.173 4.173 29 H 0.079 0.921 30 H 0.091 0.909 31 H 0.106 0.894 32 H 0.086 0.914 33 H 0.101 0.899 34 H 0.086 0.914 35 H 0.106 0.894 36 H 0.091 0.909 37 H 0.079 0.921 38 H 0.242 0.758 39 H 0.098 0.902 40 H 0.115 0.885 41 H 0.088 0.912 42 H 0.087 0.913 43 H 0.102 0.898 44 H 0.210 0.790 45 H -0.166 1.166 46 H -0.180 1.180 47 H 0.160 0.840 48 H 0.164 0.836 49 H 0.105 0.895 50 H 0.152 0.848 51 H 0.122 0.878 52 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -1.294 1.768 0.741 2.313 hybrid contribution -0.821 -0.131 2.024 2.189 sum -2.115 1.637 2.766 3.847 Atomic orbital electron populations 1.22526 0.93839 1.05041 1.02732 1.22128 0.94438 0.91562 0.81822 1.21881 1.02374 0.92320 1.03346 1.22523 1.01660 1.03439 0.96522 1.86306 1.71461 1.23354 1.46795 1.18056 0.78603 0.80590 0.82072 1.90921 1.40857 1.70516 1.42952 1.44347 1.55477 1.11644 1.23942 1.21779 0.99085 0.78642 0.97146 0.87058 1.23600 0.98859 1.00256 0.95831 1.22680 0.97099 0.96640 0.96556 0.87738 1.22978 0.79011 0.97898 1.00940 1.86060 1.25892 1.37126 1.72540 1.18110 0.90875 0.86590 0.93564 1.18437 0.92798 0.95997 1.07154 1.25015 0.91254 0.99921 1.01074 1.86765 1.31597 1.79559 1.35690 0.93867 0.82692 0.82463 0.77169 1.19161 0.84370 0.93601 0.98310 1.19677 0.94112 0.88429 1.02993 1.19878 0.91004 0.96938 0.99383 1.21001 1.00581 0.95887 1.04591 1.87404 1.17458 1.33944 1.83531 1.25720 0.83435 0.90066 0.90931 1.87523 1.26606 1.52659 1.53779 1.23361 0.95332 1.02252 0.96354 0.92126 0.90903 0.89435 0.91352 0.89909 0.91397 0.89426 0.90909 0.92062 0.75800 0.90228 0.88536 0.91217 0.91285 0.89795 0.79045 1.16614 1.17957 0.84009 0.83639 0.89523 0.84843 0.87847 0.89818 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.19 8.37 37.16 0.31 0.12 16 2 C 0.14 0.14 1.13 -90.62 -0.10 0.04 16 3 C -0.14 0.13 8.85 37.15 0.33 0.46 16 4 C -0.18 -0.21 8.37 37.16 0.31 0.10 16 5 O -0.36 -0.74 9.94 -40.31 -0.40 -1.14 16 6 C 0.65 1.49 8.06 54.06 0.44 1.93 16 7 O -0.56 -2.62 11.48 -19.27 -0.22 -2.84 16 8 N -0.70 0.56 5.26 -57.85 -0.30 0.26 16 9 C 0.14 -0.26 4.33 -67.03 -0.29 -0.55 16 10 H 0.11 -0.05 7.46 -51.93 -0.39 -0.44 16 11 C -0.15 0.31 7.44 -25.83 -0.19 0.12 16 12 C -0.11 0.38 3.88 -89.81 -0.35 0.03 16 13 H 0.10 -0.34 8.14 -51.93 -0.42 -0.77 16 14 C 0.07 -0.19 4.56 37.16 0.17 -0.02 16 15 O -0.30 -0.05 8.90 -19.67 -0.18 -0.22 16 16 C 0.15 0.22 6.66 -39.26 -0.26 -0.04 16 17 C -0.14 -0.42 4.48 -104.36 -0.47 -0.89 16 18 C -0.06 -0.14 2.71 36.01 0.10 -0.04 16 19 O -0.53 -1.22 12.49 -35.23 -0.44 -1.66 16 20 Si 0.74 1.73 32.02 -169.99 -5.44 -3.71 16 21 C 0.09 0.37 5.95 -39.09 -0.23 0.14 16 22 C -0.01 -0.03 7.15 -39.10 -0.28 -0.31 16 23 C -0.05 -0.06 10.05 -39.48 -0.40 -0.46 16 24 C -0.20 -0.02 9.03 -39.42 -0.36 -0.37 16 25 O -0.31 -1.05 11.41 -46.03 -0.53 -1.57 16 26 C 0.21 0.24 8.89 101.05 0.90 1.13 16 27 O -0.29 -1.27 10.18 -45.70 -0.47 -1.74 16 28 C -0.13 0.57 7.39 -25.92 -0.19 0.37 16 29 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 30 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.09 0.27 5.88 -51.93 -0.31 -0.03 16 32 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 34 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 35 H 0.09 0.28 5.88 -51.93 -0.31 -0.02 16 36 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 37 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 38 H 0.41 -1.11 8.81 -40.82 -0.36 -1.47 16 39 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.10 -0.24 7.92 -51.93 -0.41 -0.65 16 41 H 0.07 -0.25 7.39 -51.93 -0.38 -0.63 16 42 H 0.07 -0.27 7.66 -51.93 -0.40 -0.66 16 43 H 0.08 0.08 6.82 -51.93 -0.35 -0.27 16 44 H 0.36 -0.23 9.07 45.56 0.41 0.19 16 45 H -0.24 -1.33 6.76 56.52 0.38 -0.95 16 46 H -0.25 -1.05 7.11 56.52 0.40 -0.65 16 47 H 0.14 -0.14 8.06 -52.49 -0.42 -0.56 16 48 H 0.15 -0.40 6.29 -52.49 -0.33 -0.73 16 49 H 0.09 -0.08 8.14 -51.93 -0.42 -0.51 16 50 H 0.13 -0.21 8.14 -51.93 -0.42 -0.63 16 51 H 0.10 -0.54 8.10 -51.93 -0.42 -0.96 16 52 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 LS Contribution 419.89 15.07 6.33 6.33 Total: 0.00 -8.60 419.89 -10.17 -18.77 By element: Atomic # 1 Polarization: -6.28 SS G_CDS: -7.95 Total: -14.23 kcal Atomic # 6 Polarization: 2.34 SS G_CDS: -0.57 Total: 1.77 kcal Atomic # 7 Polarization: 0.56 SS G_CDS: -0.30 Total: 0.26 kcal Atomic # 8 Polarization: -6.96 SS G_CDS: -2.23 Total: -9.18 kcal Atomic # 14 Polarization: 1.73 SS G_CDS: -5.44 Total: -3.71 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -8.60 -10.17 -18.77 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15096578_15734082.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.903 kcal (2) G-P(sol) polarization free energy of solvation -8.600 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.504 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.168 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.768 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.671 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds