Wall clock time and date at job start Tue Mar 9 2021 16:03:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53002 * 109.46824 * 2 1 4 4 C 1.52996 * 109.47180 * 239.99887 * 2 1 3 5 5 O 1.42906 * 109.46927 * 119.99667 * 2 1 3 6 6 C 1.42896 * 113.99728 * 60.00515 * 5 2 1 7 7 H 1.09004 * 112.90955 * 341.24492 * 6 5 2 8 8 C 1.53784 * 113.61566 * 112.49953 * 6 5 2 9 9 C 1.53778 * 87.08081 * 139.97943 * 8 6 5 10 10 H 1.08999 * 113.69218 * 89.12660 * 9 8 6 11 11 C 1.53001 * 113.61526 * 220.01868 * 9 8 6 12 12 O 1.42901 * 109.47278 * 272.50133 * 11 9 8 13 13 C 1.35914 * 116.99949 * 179.97438 * 12 11 9 14 14 C 1.38805 * 120.04458 * 179.71978 * 13 12 11 15 15 Br 1.89100 * 120.00971 * 0.02562 * 14 13 12 16 16 C 1.38236 * 119.97663 * 179.79400 * 14 13 12 17 17 C 1.38218 * 120.07102 * 0.45985 * 16 14 13 18 18 C 1.50696 * 119.95302 * 179.77248 * 17 16 14 19 19 O 1.42898 * 109.47254 * 255.02221 * 18 17 16 20 20 Si 1.86304 * 109.47297 * 15.02146 * 18 17 16 21 21 C 1.38506 * 120.09172 * 359.79284 * 17 16 14 22 22 F 1.35092 * 119.98880 * 179.97438 * 21 17 16 23 23 C 1.38354 * 120.02058 * 359.97438 * 21 17 16 24 24 C 1.53778 * 87.08449 * 334.56700 * 9 8 6 25 25 H 1.09003 * 109.47430 * 299.99918 * 1 2 3 26 26 H 1.08995 * 109.47096 * 60.00106 * 1 2 3 27 27 H 1.09005 * 109.46779 * 180.02562 * 1 2 3 28 28 H 1.09006 * 109.46951 * 179.97438 * 3 2 1 29 29 H 1.08995 * 109.47197 * 299.99833 * 3 2 1 30 30 H 1.08996 * 109.46976 * 60.00263 * 3 2 1 31 31 H 1.09001 * 109.46946 * 300.00104 * 4 2 1 32 32 H 1.08995 * 109.47100 * 60.00009 * 4 2 1 33 33 H 1.08999 * 109.46832 * 179.97438 * 4 2 1 34 34 H 1.08993 * 113.61313 * 254.52539 * 8 6 5 35 35 H 1.09000 * 113.61578 * 25.43271 * 8 6 5 36 36 H 1.09008 * 109.46870 * 32.49758 * 11 9 8 37 37 H 1.09000 * 109.47055 * 152.49586 * 11 9 8 38 38 H 1.08000 * 119.96585 * 180.21111 * 16 14 13 39 39 H 1.09004 * 109.47356 * 135.02520 * 18 17 16 40 40 H 0.96706 * 114.00287 * 60.00169 * 19 18 17 41 41 H 1.48509 * 109.99793 * 180.02562 * 20 18 17 42 42 H 1.48501 * 109.99906 * 301.31920 * 20 18 17 43 43 H 1.07995 * 120.03547 * 180.02562 * 23 21 17 44 44 H 1.08998 * 113.61879 * 270.88747 * 24 9 8 45 45 H 1.08999 * 113.61887 * 139.97854 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0063 -0.6736 1.1669 6 6 1.5847 -2.0355 1.2645 7 1 0.7242 -2.2595 0.6341 8 6 2.7335 -3.0478 1.1214 9 6 2.0563 -3.8556 2.2410 10 1 1.3245 -4.5778 1.8788 11 6 3.0420 -4.4602 3.2429 12 8 3.4765 -5.7375 2.7721 13 6 4.3619 -6.4136 3.5508 14 6 4.8214 -7.6627 3.1568 15 35 4.2163 -8.4249 1.5354 16 6 5.7252 -8.3472 3.9477 17 6 6.1647 -7.7933 5.1354 18 6 7.1460 -8.5441 5.9981 19 8 6.4657 -9.0875 7.1311 20 14 7.9100 -9.9269 5.0105 21 6 5.7040 -6.5494 5.5339 22 9 6.1346 -6.0102 6.6953 23 6 4.8032 -5.8588 4.7428 24 6 1.4333 -2.5311 2.7124 25 1 -0.3634 0.5138 0.8900 26 1 -0.3633 0.5138 -0.8899 27 1 -0.3633 -1.0277 0.0005 28 1 3.1300 1.4426 0.0005 29 1 1.6766 1.9563 -0.8899 30 1 1.6766 1.9563 0.8900 31 1 1.6767 -1.7489 -1.2491 32 1 1.6767 -0.2075 -2.1391 33 1 3.1300 -0.7208 -1.2494 34 1 2.7463 -3.5604 0.1596 35 1 3.7073 -2.6456 1.4009 36 1 3.9029 -3.8000 3.3490 37 1 2.5520 -4.5765 4.2096 38 1 6.0852 -9.3176 3.6393 39 1 7.9278 -7.8637 6.3356 40 1 5.7550 -9.7033 6.9053 41 1 8.8793 -10.6754 5.8504 42 1 6.8512 -10.8441 4.5177 43 1 4.4442 -4.8887 5.0531 44 1 2.0515 -1.9876 3.4269 45 1 0.3965 -2.6266 3.0350 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_15096606_14598384.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 16:03:07 Heat of formation + Delta-G solvation = -105.866614 kcal Electronic energy + Delta-G solvation = -27900.819640 eV Core-core repulsion = 23654.196750 eV Total energy + Delta-G solvation = -4246.622890 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.072 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -50.06648 -41.64490 -40.84471 -39.40306 -38.28666 -37.34834 -33.96686 -33.31465 -32.35869 -30.35908 -29.52164 -28.44027 -28.36702 -26.76039 -26.49290 -24.78358 -23.27047 -22.66547 -20.90776 -20.74793 -19.80616 -18.62623 -18.20412 -17.69126 -17.37436 -17.19617 -16.83831 -16.63932 -16.43697 -16.04403 -15.89361 -15.78427 -15.45770 -15.31418 -14.85182 -14.59402 -14.54346 -13.99647 -13.91895 -13.67888 -13.52463 -13.38137 -13.11408 -13.09723 -12.89983 -12.79783 -12.70007 -12.58219 -12.40984 -12.24579 -12.00531 -11.82226 -11.78372 -11.67930 -11.44635 -11.27262 -11.21650 -10.71617 -10.40077 -10.11296 -9.38971 -5.04653 -0.31768 -0.15757 0.56127 1.15120 1.47966 1.75464 1.87267 2.08266 2.66929 2.95495 3.23595 3.30259 3.33443 3.44562 3.49768 3.66687 3.68078 3.69187 3.83911 3.90489 3.98659 3.99966 4.03881 4.08783 4.21792 4.27168 4.40010 4.46663 4.52065 4.57154 4.59746 4.66737 4.67565 4.70207 4.71930 4.76537 4.82411 4.84146 4.87099 4.93849 5.04987 5.07171 5.22740 5.26083 5.29568 5.32908 5.97216 6.32132 6.36219 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.176 4.176 5 O -0.361 6.361 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.148 4.148 9 C -0.109 4.109 10 H 0.107 0.893 11 C 0.066 3.934 12 O -0.289 6.289 13 C 0.198 3.802 14 C -0.138 4.138 15 Br -0.021 7.021 16 C -0.027 4.027 17 C -0.188 4.188 18 C -0.069 4.069 19 O -0.524 6.524 20 Si 0.690 3.310 21 C 0.186 3.814 22 F -0.120 7.120 23 C -0.245 4.245 24 C -0.127 4.127 25 H 0.065 0.935 26 H 0.068 0.932 27 H 0.059 0.941 28 H 0.063 0.937 29 H 0.071 0.929 30 H 0.063 0.937 31 H 0.058 0.942 32 H 0.066 0.934 33 H 0.065 0.935 34 H 0.074 0.926 35 H 0.091 0.909 36 H 0.072 0.928 37 H 0.071 0.929 38 H 0.153 0.847 39 H 0.121 0.879 40 H 0.376 0.624 41 H -0.250 1.250 42 H -0.254 1.254 43 H 0.152 0.848 44 H 0.094 0.906 45 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.158 1.753 -3.189 3.819 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.234 4.234 5 O -0.281 6.281 6 C 0.004 3.996 7 H 0.111 0.889 8 C -0.185 4.185 9 C -0.127 4.127 10 H 0.125 0.875 11 C -0.009 4.009 12 O -0.202 6.202 13 C 0.149 3.851 14 C -0.218 4.218 15 Br 0.064 6.936 16 C -0.046 4.046 17 C -0.191 4.191 18 C -0.178 4.178 19 O -0.331 6.331 20 Si 0.590 3.410 21 C 0.166 3.834 22 F -0.098 7.098 23 C -0.265 4.265 24 C -0.164 4.164 25 H 0.084 0.916 26 H 0.087 0.913 27 H 0.078 0.922 28 H 0.083 0.917 29 H 0.090 0.910 30 H 0.082 0.918 31 H 0.077 0.923 32 H 0.085 0.915 33 H 0.084 0.916 34 H 0.092 0.908 35 H 0.110 0.890 36 H 0.090 0.910 37 H 0.089 0.911 38 H 0.170 0.830 39 H 0.139 0.861 40 H 0.224 0.776 41 H -0.175 1.175 42 H -0.179 1.179 43 H 0.169 0.831 44 H 0.112 0.888 45 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -0.808 1.061 -3.560 3.801 hybrid contribution -1.002 0.092 1.180 1.551 sum -1.810 1.153 -2.379 3.205 Atomic orbital electron populations 1.22474 0.95637 1.02452 1.03102 1.21544 0.93103 0.93256 0.85505 1.21771 1.02039 0.93200 1.02624 1.22469 1.02341 1.00772 0.97804 1.88035 1.73744 1.23336 1.42939 1.23558 0.97074 0.81911 0.97038 0.88941 1.23624 0.99422 0.96400 0.99075 1.22317 0.97926 0.95902 0.96579 0.87521 1.23023 0.97872 0.81836 0.98146 1.86239 1.56055 1.32202 1.45656 1.18262 0.88303 0.89979 0.88604 1.20989 1.06413 0.96087 0.98331 1.96789 1.88579 1.82033 1.26170 1.20853 0.92935 0.99289 0.91557 1.20206 1.04698 0.96030 0.98150 1.24917 0.96372 1.04512 0.92043 1.86660 1.52094 1.63688 1.30613 0.94889 0.82851 0.78588 0.84647 1.17203 0.93242 0.91059 0.81905 1.91569 1.87637 1.85386 1.45223 1.21195 1.04785 1.03895 0.96624 1.23239 1.01883 0.94084 0.97233 0.91606 0.91326 0.92228 0.91744 0.91039 0.91768 0.92264 0.91518 0.91642 0.90751 0.89033 0.90991 0.91128 0.83011 0.86110 0.77623 1.17492 1.17856 0.83054 0.88756 0.90304 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.18 8.38 37.16 0.31 0.50 16 2 C 0.10 -0.02 1.11 -90.62 -0.10 -0.12 16 3 C -0.14 0.08 8.84 37.16 0.33 0.41 16 4 C -0.18 0.15 8.38 37.16 0.31 0.46 16 5 O -0.36 -0.41 10.00 -35.23 -0.35 -0.76 16 6 C 0.06 -0.05 2.82 -25.91 -0.07 -0.12 16 7 H 0.09 -0.13 5.55 -51.93 -0.29 -0.42 16 8 C -0.15 0.14 7.46 -25.92 -0.19 -0.05 16 9 C -0.11 0.19 4.01 -89.81 -0.36 -0.17 16 10 H 0.11 -0.18 8.14 -51.93 -0.42 -0.60 16 11 C 0.07 -0.10 4.58 37.16 0.17 0.07 16 12 O -0.29 -0.19 9.47 -19.47 -0.18 -0.37 16 13 C 0.20 0.18 6.68 -39.21 -0.26 -0.08 16 14 C -0.14 -0.14 6.24 -39.37 -0.25 -0.38 16 15 Br -0.02 -0.03 33.15 -68.01 -2.25 -2.28 16 16 C -0.03 0.00 8.39 -39.59 -0.33 -0.33 16 17 C -0.19 -0.06 5.27 -104.53 -0.55 -0.61 16 18 C -0.07 0.00 2.45 36.00 0.09 0.09 16 19 O -0.52 -0.78 12.88 -35.23 -0.45 -1.23 16 20 Si 0.69 -0.91 30.24 -169.99 -5.14 -6.05 16 21 C 0.19 0.24 7.24 -39.44 -0.29 -0.05 16 22 F -0.12 -0.32 16.75 2.25 0.04 -0.28 16 23 C -0.24 -0.08 9.02 -39.37 -0.35 -0.44 16 24 C -0.13 0.21 7.47 -25.92 -0.19 0.02 16 25 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 26 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 27 H 0.06 -0.08 6.25 -51.93 -0.32 -0.41 16 28 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 29 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.06 -0.06 7.02 -51.93 -0.36 -0.42 16 32 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 33 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 35 H 0.09 -0.03 7.90 -51.93 -0.41 -0.44 16 36 H 0.07 -0.15 7.36 -51.92 -0.38 -0.53 16 37 H 0.07 -0.17 7.66 -51.93 -0.40 -0.57 16 38 H 0.15 -0.22 4.85 -52.49 -0.25 -0.48 16 39 H 0.12 -0.04 7.90 -51.93 -0.41 -0.45 16 40 H 0.38 -0.64 8.70 45.56 0.40 -0.24 16 41 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 42 H -0.25 0.02 6.68 56.52 0.38 0.40 16 43 H 0.15 -0.20 6.30 -52.49 -0.33 -0.53 16 44 H 0.09 -0.13 8.10 -51.93 -0.42 -0.55 16 45 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 LS Contribution 383.62 15.07 5.78 5.78 Total: 0.00 -4.85 383.62 -10.95 -15.79 By element: Atomic # 1 Polarization: -3.14 SS G_CDS: -6.64 Total: -9.78 kcal Atomic # 6 Polarization: 0.93 SS G_CDS: -1.74 Total: -0.81 kcal Atomic # 8 Polarization: -1.38 SS G_CDS: -0.99 Total: -2.37 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.04 Total: -0.28 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.14 Total: -6.05 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -2.25 Total: -2.28 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -4.85 -10.95 -15.79 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15096606_14598384.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.076 kcal (2) G-P(sol) polarization free energy of solvation -4.846 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.921 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.945 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.791 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.867 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds