Wall clock time and date at job start Tue Mar 9 2021 16:03:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53001 * 109.47096 * 2 1 4 4 C 1.53000 * 109.47209 * 240.00180 * 2 1 3 5 5 O 1.45194 * 109.47345 * 119.99840 * 2 1 3 6 6 C 1.34642 * 116.99605 * 60.00019 * 5 2 1 7 7 O 1.21500 * 120.00202 * 0.02562 * 6 5 2 8 8 N 1.34774 * 119.99746 * 180.02562 * 6 5 2 9 9 C 1.46506 * 119.99981 * 180.02562 * 8 6 5 10 10 H 1.08998 * 112.85063 * 23.80349 * 9 8 6 11 11 C 1.53781 * 113.61613 * 154.99882 * 9 8 6 12 12 C 1.53786 * 87.17350 * 89.15811 * 11 9 8 13 13 H 1.09000 * 113.60973 * 270.92699 * 12 11 9 14 14 C 1.52990 * 113.61464 * 140.02626 * 12 11 9 15 15 O 1.42903 * 109.47168 * 175.00198 * 14 12 11 16 16 C 1.35917 * 117.00359 * 180.02562 * 15 14 12 17 17 C 1.38792 * 120.04944 * 179.97438 * 16 15 14 18 18 Br 1.89106 * 120.00932 * 359.97438 * 17 16 15 19 19 C 1.38238 * 119.98041 * 179.97438 * 17 16 15 20 20 C 1.38211 * 120.06987 * 359.97355 * 19 17 16 21 21 C 1.50702 * 119.95614 * 180.02562 * 20 19 17 22 22 O 1.42906 * 109.46901 * 15.00159 * 21 20 19 23 23 Si 1.86296 * 109.47130 * 134.99824 * 21 20 19 24 24 C 1.38505 * 120.09359 * 0.02562 * 20 19 17 25 25 F 1.35101 * 119.99155 * 180.02562 * 24 20 19 26 26 C 1.38356 * 120.01825 * 359.78187 * 24 20 19 27 27 C 1.53781 * 113.68810 * 252.53321 * 9 8 6 28 28 H 1.08995 * 109.47142 * 299.99815 * 1 2 3 29 29 H 1.08997 * 109.47172 * 59.99816 * 1 2 3 30 30 H 1.09004 * 109.46814 * 179.97438 * 1 2 3 31 31 H 1.08994 * 109.47632 * 179.97438 * 3 2 1 32 32 H 1.08997 * 109.47260 * 300.00130 * 3 2 1 33 33 H 1.09012 * 109.46937 * 59.99876 * 3 2 1 34 34 H 1.08995 * 109.47029 * 299.99804 * 4 2 1 35 35 H 1.08997 * 109.47050 * 59.99929 * 4 2 1 36 36 H 1.09004 * 109.46966 * 179.97438 * 4 2 1 37 37 H 0.97003 * 120.00744 * 359.97438 * 8 6 5 38 38 H 1.09002 * 113.61445 * 203.74810 * 11 9 8 39 39 H 1.09002 * 113.61408 * 334.56541 * 11 9 8 40 40 H 1.09007 * 109.47036 * 294.99322 * 14 12 11 41 41 H 1.08994 * 109.47734 * 54.99728 * 14 12 11 42 42 H 1.08000 * 119.96695 * 179.97438 * 19 17 16 43 43 H 1.09001 * 109.47702 * 255.00291 * 21 20 19 44 44 H 0.96698 * 113.99982 * 179.97438 * 22 21 20 45 45 H 1.48493 * 110.00367 * 300.00356 * 23 21 20 46 46 H 1.48504 * 110.00072 * 61.32389 * 23 21 20 47 47 H 1.08006 * 120.03591 * 180.23582 * 26 24 20 48 48 H 1.09005 * 113.61471 * 25.42227 * 27 9 8 49 49 H 1.09003 * 113.61469 * 156.32005 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0140 -0.6844 1.1855 6 6 1.6522 -1.9723 1.3383 7 8 0.9517 -2.5096 0.5036 8 7 2.0672 -2.6654 2.4171 9 6 1.6741 -4.0669 2.5830 10 1 1.4225 -4.5506 1.6392 11 6 2.6471 -4.8809 3.4522 12 6 1.8062 -4.4480 4.6648 13 1 2.1341 -3.5090 5.1106 14 6 1.6029 -5.5585 5.6974 15 8 0.9143 -5.0321 6.8336 16 6 0.6530 -5.8947 7.8510 17 6 -0.0122 -5.4505 8.9852 18 35 -0.5552 -3.6438 9.1165 19 6 -0.2777 -6.3291 10.0189 20 6 0.1181 -7.6499 9.9240 21 6 -0.1732 -8.6057 11.0522 22 8 -1.1459 -8.0289 11.9259 23 14 -0.8324 -10.2037 10.3576 24 6 0.7821 -8.0964 8.7934 25 9 1.1676 -9.3881 8.7026 26 6 1.0462 -7.2212 7.7549 27 6 0.6266 -4.2881 3.6870 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1299 1.4426 0.0005 32 1 1.6767 1.9564 -0.8899 33 1 1.6766 1.9564 0.8901 34 1 1.6767 -1.7488 -1.2493 35 1 1.6767 -0.2074 -2.1392 36 1 3.1301 -0.7208 -1.2494 37 1 2.6269 -2.2366 3.0833 38 1 2.6137 -5.9530 3.2580 39 1 3.6621 -4.4837 3.4604 40 1 1.0135 -6.3620 5.2556 41 1 2.5724 -5.9476 6.0083 42 1 -0.7950 -5.9831 10.9016 43 1 0.7436 -8.8019 11.6081 44 1 -1.3824 -8.5906 12.6766 45 1 -2.0824 -9.9499 9.5974 46 1 0.1823 -10.8296 9.4722 47 1 1.5606 -7.5700 6.8716 48 1 0.0101 -3.4115 3.8860 49 1 0.0408 -5.1981 3.5571 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_15096606_15734082.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 16:03:10 Heat of formation + Delta-G solvation = -122.976083 kcal Electronic energy + Delta-G solvation = -33350.493245 eV Core-core repulsion = 28435.256570 eV Total energy + Delta-G solvation = -4915.236674 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.083 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -50.66814 -42.03021 -41.56533 -40.42658 -39.11201 -37.93187 -37.31646 -35.41184 -34.18582 -33.46343 -32.28093 -30.42898 -29.55101 -28.41179 -28.34257 -26.83129 -26.57632 -25.09306 -23.98507 -22.95371 -22.56987 -21.22056 -20.42385 -19.91398 -19.37410 -18.86177 -17.96827 -17.73133 -17.64732 -17.30950 -17.18062 -16.94161 -16.84354 -16.57471 -16.19513 -15.83306 -15.70571 -15.48051 -15.39010 -15.13642 -14.99464 -14.55134 -14.45399 -14.30178 -13.77475 -13.67102 -13.43980 -13.40174 -13.28506 -13.12917 -12.96333 -12.91125 -12.77664 -12.57865 -12.46906 -12.37464 -12.22718 -11.96703 -11.92881 -11.75944 -11.71783 -11.44291 -11.33748 -11.28167 -11.17096 -10.60062 -10.24372 -10.10980 -9.30803 -4.96983 -0.47788 -0.17597 0.45551 1.08198 1.26066 1.63119 1.66828 1.79548 1.94736 2.08213 2.74563 3.01428 3.05940 3.29452 3.34101 3.42164 3.61094 3.62599 3.69721 3.71310 3.76328 3.78298 3.90098 4.09261 4.16975 4.27134 4.32606 4.35224 4.42687 4.44936 4.55284 4.56778 4.57283 4.60154 4.69071 4.70328 4.72269 4.78729 4.83494 4.84142 4.84976 4.92719 4.98659 5.02570 5.12539 5.22758 5.23360 5.27574 5.42719 5.56461 5.97582 6.32092 6.84766 7.27620 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.646 3.354 7 O -0.592 6.592 8 N -0.684 5.684 9 C 0.130 3.870 10 H 0.096 0.904 11 C -0.116 4.116 12 C -0.102 4.102 13 H 0.104 0.896 14 C 0.055 3.945 15 O -0.301 6.301 16 C 0.183 3.817 17 C -0.150 4.150 18 Br -0.027 7.027 19 C -0.003 4.003 20 C -0.159 4.159 21 C -0.063 4.063 22 O -0.559 6.559 23 Si 0.758 3.242 24 C 0.126 3.874 25 F -0.119 7.119 26 C -0.231 4.231 27 C -0.148 4.148 28 H 0.060 0.940 29 H 0.087 0.913 30 H 0.063 0.937 31 H 0.070 0.930 32 H 0.099 0.901 33 H 0.068 0.932 34 H 0.063 0.937 35 H 0.087 0.913 36 H 0.063 0.937 37 H 0.417 0.583 38 H 0.120 0.880 39 H 0.094 0.906 40 H 0.082 0.918 41 H 0.088 0.912 42 H 0.163 0.837 43 H 0.105 0.895 44 H 0.410 0.590 45 H -0.314 1.314 46 H -0.263 1.263 47 H 0.175 0.825 48 H 0.059 0.941 49 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.616 -2.223 2.900 5.141 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.399 3.601 7 O -0.483 6.483 8 N -0.344 5.344 9 C 0.026 3.974 10 H 0.115 0.885 11 C -0.154 4.154 12 C -0.121 4.121 13 H 0.122 0.878 14 C -0.019 4.019 15 O -0.213 6.213 16 C 0.134 3.866 17 C -0.230 4.230 18 Br 0.058 6.942 19 C -0.023 4.023 20 C -0.161 4.161 21 C -0.173 4.173 22 O -0.370 6.370 23 Si 0.663 3.337 24 C 0.107 3.893 25 F -0.097 7.097 26 C -0.251 4.251 27 C -0.186 4.186 28 H 0.079 0.921 29 H 0.106 0.894 30 H 0.082 0.918 31 H 0.089 0.911 32 H 0.117 0.883 33 H 0.087 0.913 34 H 0.082 0.918 35 H 0.106 0.894 36 H 0.082 0.918 37 H 0.254 0.746 38 H 0.139 0.861 39 H 0.113 0.887 40 H 0.100 0.900 41 H 0.106 0.894 42 H 0.181 0.819 43 H 0.122 0.878 44 H 0.262 0.738 45 H -0.243 1.243 46 H -0.189 1.189 47 H 0.192 0.808 48 H 0.078 0.922 49 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 2.883 -1.520 1.311 3.513 hybrid contribution 0.430 -0.013 -0.125 0.448 sum 3.313 -1.533 1.186 3.838 Atomic orbital electron populations 1.22474 0.94141 1.03653 1.03482 1.22365 0.94393 0.92629 0.81532 1.21894 1.02514 0.90833 1.04235 1.22471 1.01695 1.02232 0.97272 1.86313 1.71533 1.23223 1.47343 1.18318 0.78566 0.80805 0.82370 1.90903 1.42111 1.70892 1.44411 1.44377 1.54889 1.12056 1.23030 1.21837 0.97044 0.79212 0.99344 0.88546 1.23321 0.98644 1.01917 0.91543 1.22648 0.97632 0.99020 0.92782 0.87807 1.23289 0.97239 0.97616 0.83756 1.86244 1.72591 1.36322 1.26176 1.18313 0.92306 0.88274 0.87743 1.21337 1.10115 0.94151 0.97408 1.96758 1.89787 1.09271 1.98343 1.20742 0.94224 0.90221 0.97118 1.19617 1.04096 0.95876 0.96502 1.24512 0.96779 1.02609 0.93355 1.86320 1.60038 1.48660 1.41940 0.95168 0.75377 0.78754 0.84413 1.17394 0.98106 0.79002 0.94846 1.91504 1.88581 1.33505 1.96124 1.21274 1.09689 0.92143 1.02037 1.23627 0.96789 1.02989 0.95225 0.92101 0.89391 0.91833 0.91074 0.88254 0.91287 0.91766 0.89436 0.91823 0.74647 0.86143 0.88699 0.90029 0.89415 0.81945 0.87767 0.73772 1.24256 1.18909 0.80781 0.92209 0.88012 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.74 8.37 71.98 0.60 -0.13 16 2 C 0.13 0.44 1.13 -10.79 -0.01 0.43 16 3 C -0.14 0.22 8.85 71.98 0.64 0.86 16 4 C -0.18 -0.62 8.37 71.98 0.60 -0.01 16 5 O -0.37 -2.22 9.94 -55.52 -0.55 -2.77 16 6 C 0.65 4.55 8.06 129.79 1.05 5.59 16 7 O -0.59 -7.34 11.48 19.84 0.23 -7.11 16 8 N -0.68 -0.27 5.27 -567.60 -2.99 -3.26 16 9 C 0.13 -0.26 4.32 45.52 0.20 -0.06 16 10 H 0.10 0.13 7.46 -2.39 -0.02 0.12 16 11 C -0.12 0.96 7.38 31.12 0.23 1.19 16 12 C -0.10 0.58 3.90 -10.18 -0.04 0.54 16 13 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 14 C 0.06 -0.28 4.58 71.98 0.33 0.05 16 15 O -0.30 -0.55 9.47 -92.62 -0.88 -1.43 16 16 C 0.18 0.65 6.67 22.51 0.15 0.80 16 17 C -0.15 -0.82 6.24 22.40 0.14 -0.68 16 18 Br -0.03 -0.15 33.16 -20.37 -0.68 -0.83 16 19 C 0.00 -0.02 9.10 22.26 0.20 0.19 16 20 C -0.16 -0.62 5.16 -19.81 -0.10 -0.72 16 21 C -0.06 0.08 2.96 71.24 0.21 0.29 16 22 O -0.56 1.46 11.48 -148.98 -1.71 -0.25 16 23 Si 0.76 -0.75 30.73 68.60 2.11 1.36 16 24 C 0.13 0.50 6.66 22.36 0.15 0.65 16 25 F -0.12 -0.58 12.87 44.97 0.58 0.00 16 26 C -0.23 -0.35 9.02 22.41 0.20 -0.15 16 27 C -0.15 0.33 7.45 31.21 0.23 0.56 16 28 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 29 H 0.09 0.04 8.14 -2.39 -0.02 0.02 16 30 H 0.06 0.60 5.88 -2.38 -0.01 0.59 16 31 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 32 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 33 H 0.07 -0.11 8.14 -2.38 -0.02 -0.13 16 34 H 0.06 0.56 5.88 -2.39 -0.01 0.54 16 35 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 36 H 0.06 0.16 8.14 -2.38 -0.02 0.14 16 37 H 0.42 -1.60 8.81 -92.71 -0.82 -2.41 16 38 H 0.12 -1.34 8.10 -2.39 -0.02 -1.36 16 39 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 40 H 0.08 -0.57 7.36 -2.38 -0.02 -0.59 16 41 H 0.09 -0.71 7.67 -2.39 -0.02 -0.73 16 42 H 0.16 0.59 7.13 -2.91 -0.02 0.57 16 43 H 0.10 -0.56 7.96 -2.39 -0.02 -0.58 16 44 H 0.41 -5.29 8.74 -74.06 -0.65 -5.93 16 45 H -0.31 -2.66 7.11 99.48 0.71 -1.95 16 46 H -0.26 -1.04 5.40 99.48 0.54 -0.51 16 47 H 0.17 -0.69 6.30 -2.91 -0.02 -0.71 16 48 H 0.06 0.12 8.14 -2.38 -0.02 0.10 16 49 H 0.10 -0.35 7.90 -2.39 -0.02 -0.37 16 Total: 0.00 -20.31 415.74 0.29 -20.02 By element: Atomic # 1 Polarization: -14.55 SS G_CDS: -0.59 Total: -15.15 kcal Atomic # 6 Polarization: 4.63 SS G_CDS: 4.78 Total: 9.41 kcal Atomic # 7 Polarization: -0.27 SS G_CDS: -2.99 Total: -3.26 kcal Atomic # 8 Polarization: -8.64 SS G_CDS: -2.91 Total: -11.55 kcal Atomic # 9 Polarization: -0.58 SS G_CDS: 0.58 Total: 0.00 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: 2.11 Total: 1.36 kcal Atomic # 35 Polarization: -0.15 SS G_CDS: -0.68 Total: -0.83 kcal Total: -20.31 0.29 -20.02 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15096606_15734082.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.953 kcal (2) G-P(sol) polarization free energy of solvation -20.315 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.268 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.292 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.023 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.976 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds