Wall clock time and date at job start Tue Mar 9 2021 16:08:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42899 * 114.00339 * 2 1 4 4 C 1.53010 * 112.90632 * 66.33453 * 3 2 1 5 5 F 1.39900 * 109.46741 * 283.27260 * 4 3 2 6 6 F 1.39897 * 109.46941 * 43.27073 * 4 3 2 7 7 F 1.39897 * 109.47005 * 163.27687 * 4 3 2 8 8 C 1.53783 * 113.61484 * 295.08682 * 3 2 1 9 9 C 1.53778 * 87.07832 * 270.88107 * 8 3 2 10 10 H 1.09010 * 113.61524 * 219.93551 * 9 8 3 11 11 C 1.53001 * 113.61797 * 89.11514 * 9 8 3 12 12 O 1.42901 * 109.47409 * 174.99913 * 11 9 8 13 13 C 1.35912 * 117.00252 * 180.02562 * 12 11 9 14 14 C 1.38799 * 120.05061 * 179.97438 * 13 12 11 15 15 Br 1.89102 * 120.00593 * 359.95604 * 14 13 12 16 16 C 1.38237 * 119.98041 * 179.97438 * 14 13 12 17 17 C 1.38215 * 120.07249 * 359.97438 * 16 14 13 18 18 C 1.50700 * 119.95687 * 180.02562 * 17 16 14 19 19 O 1.42903 * 109.47040 * 255.02611 * 18 17 16 20 20 Si 1.86299 * 109.46871 * 15.02019 * 18 17 16 21 21 C 1.38507 * 120.08931 * 0.02562 * 17 16 14 22 22 F 1.35099 * 119.99038 * 179.69658 * 21 17 16 23 23 C 1.38362 * 120.02183 * 359.97276 * 21 17 16 24 24 C 1.53778 * 113.62114 * 197.58645 * 3 2 1 25 25 H 1.09000 * 109.46882 * 182.28484 * 1 2 3 26 26 H 1.08999 * 109.46874 * 302.29147 * 1 2 3 27 27 H 1.09000 * 109.46862 * 62.28462 * 1 2 3 28 28 H 1.09002 * 113.61640 * 156.33048 * 8 3 2 29 29 H 1.08994 * 113.68995 * 25.44014 * 8 3 2 30 30 H 1.09002 * 109.46478 * 55.00019 * 11 9 8 31 31 H 1.08999 * 109.46841 * 295.00121 * 11 9 8 32 32 H 1.07998 * 119.96435 * 179.97438 * 16 14 13 33 33 H 1.08992 * 109.47048 * 135.02435 * 18 17 16 34 34 H 0.96705 * 113.99957 * 59.99204 * 19 18 17 35 35 H 1.48501 * 109.99951 * 58.68369 * 20 18 17 36 36 H 1.48499 * 109.99623 * 180.02562 * 20 18 17 37 37 H 1.07995 * 120.03325 * 179.97438 * 23 21 17 38 38 H 1.09009 * 113.60754 * 334.56785 * 24 3 2 39 39 H 1.08993 * 113.61815 * 203.67009 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7357 2.0796 1.2909 5 9 0.4212 2.5583 1.2769 6 9 1.9116 1.2316 2.3896 7 9 2.6232 3.1568 1.3863 8 6 1.7151 2.1112 -1.2761 9 6 2.9882 1.4863 -1.8707 10 1 3.5814 2.1834 -2.4626 11 6 2.7412 0.1579 -2.5887 12 8 3.9531 -0.2837 -3.2038 13 6 3.9058 -1.4569 -3.8882 14 6 5.0464 -1.9449 -4.5108 15 35 6.6674 -0.9766 -4.4082 16 6 4.9968 -3.1386 -5.2061 17 6 3.8126 -3.8474 -5.2817 18 6 3.7616 -5.1488 -6.0400 19 8 3.0914 -4.9481 -7.2860 20 14 5.4958 -5.7507 -6.3576 21 6 2.6727 -3.3632 -4.6616 22 9 1.5148 -4.0546 -4.7419 23 6 2.7180 -2.1688 -3.9646 24 6 3.4879 1.3219 -0.4257 25 1 -0.3633 -1.0269 0.0410 26 1 -0.3633 0.5490 0.8687 27 1 -0.3633 0.4780 -0.9098 28 1 1.7825 3.1902 -1.1366 29 1 0.8006 1.8065 -1.7847 30 1 1.9751 0.2945 -3.3519 31 1 2.4069 -0.5880 -1.8676 32 1 5.8843 -3.5178 -5.6908 33 1 3.2213 -5.8907 -5.4522 34 1 3.5179 -4.2987 -7.8619 35 1 6.2139 -5.9328 -5.0705 36 1 5.4593 -7.0332 -7.1053 37 1 1.8293 -1.7909 -3.4813 38 1 4.0043 0.3787 -0.2469 39 1 4.0399 2.1850 -0.0537 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_15096606_17321600.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 16:08:27 Heat of formation + Delta-G solvation = -237.304140 kcal Electronic energy + Delta-G solvation = -32404.413545 eV Core-core repulsion = 27054.804407 eV Total energy + Delta-G solvation = -5349.609137 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 415.013 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -51.22721 -50.09559 -48.77445 -48.65667 -41.99128 -41.13271 -39.25874 -37.56297 -37.07740 -33.36857 -32.42413 -30.88841 -29.98708 -28.44972 -27.70776 -27.00659 -26.36545 -24.44716 -23.23358 -22.70859 -20.78969 -20.11379 -19.66212 -19.49759 -19.29603 -18.55334 -18.06427 -17.55102 -17.28296 -17.17044 -16.83701 -16.63891 -16.41131 -16.05338 -15.78355 -15.72970 -15.58811 -15.56316 -15.42367 -15.18617 -15.11425 -14.88613 -14.83238 -14.58351 -14.39367 -14.21243 -14.06747 -13.54540 -13.42516 -13.35231 -12.91818 -12.84208 -12.61527 -12.34094 -12.15432 -12.08893 -12.01724 -11.82732 -11.69230 -11.24275 -10.97833 -10.57315 -10.13639 -9.41826 -5.13934 -0.35220 -0.18671 0.52949 1.15054 1.48518 1.56229 1.64003 1.90268 1.90323 2.05417 2.45442 2.55366 2.76125 2.92103 3.10460 3.23214 3.24978 3.29430 3.39000 3.47080 3.58182 3.64863 3.93875 3.97299 4.01125 4.04970 4.12133 4.19196 4.22253 4.26053 4.38660 4.41649 4.46491 4.53090 4.55079 4.61469 4.65652 4.77518 4.79015 5.26364 5.51362 5.91076 6.47763 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.008 3.992 2 O -0.333 6.333 3 C 0.038 3.962 4 C 0.437 3.563 5 F -0.181 7.181 6 F -0.174 7.174 7 F -0.174 7.174 8 C -0.142 4.142 9 C -0.098 4.098 10 H 0.110 0.890 11 C 0.064 3.936 12 O -0.289 6.289 13 C 0.198 3.802 14 C -0.137 4.137 15 Br -0.018 7.018 16 C -0.018 4.018 17 C -0.191 4.191 18 C -0.061 4.061 19 O -0.535 6.535 20 Si 0.683 3.317 21 C 0.185 3.815 22 F -0.121 7.121 23 C -0.243 4.243 24 C -0.112 4.112 25 H 0.102 0.898 26 H 0.055 0.945 27 H 0.055 0.945 28 H 0.114 0.886 29 H 0.095 0.905 30 H 0.072 0.928 31 H 0.089 0.911 32 H 0.153 0.847 33 H 0.116 0.884 34 H 0.379 0.621 35 H -0.250 1.250 36 H -0.248 1.248 37 H 0.151 0.849 38 H 0.100 0.900 39 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.352 2.592 -2.472 3.599 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 O -0.251 6.251 3 C -0.005 4.005 4 C 0.383 3.617 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.155 7.155 8 C -0.180 4.180 9 C -0.116 4.116 10 H 0.128 0.872 11 C -0.011 4.011 12 O -0.201 6.201 13 C 0.149 3.851 14 C -0.218 4.218 15 Br 0.067 6.933 16 C -0.037 4.037 17 C -0.193 4.193 18 C -0.172 4.172 19 O -0.340 6.340 20 Si 0.583 3.417 21 C 0.165 3.835 22 F -0.099 7.099 23 C -0.263 4.263 24 C -0.149 4.149 25 H 0.121 0.879 26 H 0.074 0.926 27 H 0.074 0.926 28 H 0.133 0.867 29 H 0.113 0.887 30 H 0.091 0.909 31 H 0.107 0.893 32 H 0.170 0.830 33 H 0.134 0.866 34 H 0.227 0.773 35 H -0.174 1.174 36 H -0.172 1.172 37 H 0.169 0.831 38 H 0.118 0.882 39 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges 1.345 1.821 -1.970 3.001 hybrid contribution -1.834 0.004 0.860 2.026 sum -0.489 1.825 -1.110 2.191 Atomic orbital electron populations 1.23169 0.79412 1.04501 1.01653 1.88082 1.21195 1.21949 1.93857 1.24064 1.00140 0.86332 0.89942 1.21151 0.74277 0.78704 0.87601 1.93190 1.37107 1.89140 1.96851 1.93225 1.94941 1.70404 1.56914 1.93184 1.68506 1.57284 1.96569 1.23599 0.99495 1.01263 0.93605 1.22051 0.97687 0.96169 0.95692 0.87186 1.22926 0.85084 0.96283 0.96793 1.86184 1.36030 1.33972 1.63907 1.18198 0.91632 0.85428 0.89828 1.20992 0.92763 0.99305 1.08716 1.96802 1.25065 1.73491 1.97948 1.20641 0.97002 0.91279 0.94825 1.20302 0.92845 1.00756 1.05420 1.24952 1.10250 0.95528 0.86463 1.86563 1.55078 1.65158 1.27196 0.94992 0.76454 0.85196 0.85040 1.17210 0.81624 0.89656 0.95054 1.91571 1.46226 1.78108 1.93961 1.21186 0.99313 0.97454 1.08362 1.23277 0.90899 1.05971 0.94711 0.87933 0.92588 0.92640 0.86746 0.88672 0.90936 0.89318 0.83012 0.86626 0.77331 1.17440 1.17195 0.83090 0.88171 0.86345 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.44 101.05 1.05 1.04 16 2 O -0.33 0.25 8.35 -35.23 -0.29 -0.04 16 3 C 0.04 -0.05 0.85 -89.80 -0.08 -0.13 16 4 C 0.44 0.19 2.52 37.16 0.09 0.28 16 5 F -0.18 -0.13 15.27 2.25 0.03 -0.10 16 6 F -0.17 -0.41 17.09 2.25 0.04 -0.37 16 7 F -0.17 -0.10 15.82 2.25 0.04 -0.06 16 8 C -0.14 0.49 6.51 -25.92 -0.17 0.32 16 9 C -0.10 0.30 4.20 -89.81 -0.38 -0.08 16 10 H 0.11 -0.39 8.14 -51.92 -0.42 -0.81 16 11 C 0.06 -0.15 4.32 37.16 0.16 0.01 16 12 O -0.29 0.07 9.47 -19.46 -0.18 -0.11 16 13 C 0.20 0.04 6.67 -39.21 -0.26 -0.22 16 14 C -0.14 -0.03 6.24 -39.37 -0.25 -0.27 16 15 Br -0.02 -0.01 33.15 -68.01 -2.25 -2.26 16 16 C -0.02 0.02 8.39 -39.59 -0.33 -0.31 16 17 C -0.19 0.01 5.27 -104.53 -0.55 -0.54 16 18 C -0.06 0.02 2.45 36.01 0.09 0.10 16 19 O -0.53 -0.11 12.88 -35.23 -0.45 -0.57 16 20 Si 0.68 -1.02 29.91 -169.99 -5.08 -6.11 16 21 C 0.18 0.18 7.24 -39.44 -0.29 -0.11 16 22 F -0.12 -0.30 16.75 2.25 0.04 -0.26 16 23 C -0.24 0.04 9.02 -39.37 -0.35 -0.32 16 24 C -0.11 0.25 6.89 -25.92 -0.18 0.07 16 25 H 0.10 -0.34 8.14 -51.93 -0.42 -0.77 16 26 H 0.06 -0.09 6.29 -51.93 -0.33 -0.41 16 27 H 0.06 -0.21 6.74 -51.93 -0.35 -0.56 16 28 H 0.11 -0.47 8.07 -51.93 -0.42 -0.89 16 29 H 0.09 -0.42 6.68 -51.93 -0.35 -0.76 16 30 H 0.07 -0.25 7.66 -51.93 -0.40 -0.65 16 31 H 0.09 -0.17 5.64 -51.93 -0.29 -0.47 16 32 H 0.15 -0.49 5.12 -52.49 -0.27 -0.76 16 33 H 0.12 0.07 7.90 -51.93 -0.41 -0.34 16 34 H 0.38 -1.53 8.70 45.56 0.40 -1.13 16 35 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 36 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 37 H 0.15 -0.27 6.30 -52.49 -0.33 -0.60 16 38 H 0.10 -0.15 8.10 -51.92 -0.42 -0.57 16 39 H 0.12 -0.35 7.00 -51.93 -0.36 -0.71 16 LS Contribution 354.40 15.07 5.34 5.34 Total: 0.00 -6.15 354.40 -7.79 -13.94 By element: Atomic # 1 Polarization: -5.67 SS G_CDS: -3.57 Total: -9.24 kcal Atomic # 6 Polarization: 1.28 SS G_CDS: -1.43 Total: -0.15 kcal Atomic # 8 Polarization: 0.21 SS G_CDS: -0.93 Total: -0.72 kcal Atomic # 9 Polarization: -0.94 SS G_CDS: 0.15 Total: -0.79 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.08 Total: -6.11 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -2.25 Total: -2.26 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -6.15 -7.79 -13.94 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15096606_17321600.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -223.365 kcal (2) G-P(sol) polarization free energy of solvation -6.147 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -229.512 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.792 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.939 kcal (6) G-S(sol) free energy of system = (1) + (5) -237.304 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds