Wall clock time and date at job start Tue Mar 9 2021 16:08:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42899 * 114.00339 * 2 1 4 4 C 1.53010 * 112.90632 * 66.33453 * 3 2 1 5 5 F 1.39900 * 109.46741 * 283.27260 * 4 3 2 6 6 F 1.39897 * 109.46941 * 43.27073 * 4 3 2 7 7 F 1.39897 * 109.47005 * 163.27687 * 4 3 2 8 8 C 1.53783 * 113.61484 * 295.08682 * 3 2 1 9 9 C 1.53778 * 87.07832 * 270.88107 * 8 3 2 10 10 H 1.09010 * 113.61524 * 219.93551 * 9 8 3 11 11 C 1.53001 * 113.61797 * 89.11514 * 9 8 3 12 12 O 1.42901 * 109.47409 * 174.99913 * 11 9 8 13 13 C 1.35912 * 117.00252 * 180.02562 * 12 11 9 14 14 C 1.38799 * 120.05061 * 179.97438 * 13 12 11 15 15 Br 1.89102 * 120.00593 * 359.95604 * 14 13 12 16 16 C 1.38237 * 119.98041 * 179.97438 * 14 13 12 17 17 C 1.38215 * 120.07249 * 359.97438 * 16 14 13 18 18 C 1.50700 * 119.95687 * 180.02562 * 17 16 14 19 19 O 1.42903 * 109.47040 * 255.02611 * 18 17 16 20 20 Si 1.86299 * 109.46871 * 15.02019 * 18 17 16 21 21 C 1.38507 * 120.08931 * 0.02562 * 17 16 14 22 22 F 1.35099 * 119.99038 * 179.69658 * 21 17 16 23 23 C 1.38362 * 120.02183 * 359.97276 * 21 17 16 24 24 C 1.53778 * 113.62114 * 197.58645 * 3 2 1 25 25 H 1.09000 * 109.46882 * 182.28484 * 1 2 3 26 26 H 1.08999 * 109.46874 * 302.29147 * 1 2 3 27 27 H 1.09000 * 109.46862 * 62.28462 * 1 2 3 28 28 H 1.09002 * 113.61640 * 156.33048 * 8 3 2 29 29 H 1.08994 * 113.68995 * 25.44014 * 8 3 2 30 30 H 1.09002 * 109.46478 * 55.00019 * 11 9 8 31 31 H 1.08999 * 109.46841 * 295.00121 * 11 9 8 32 32 H 1.07998 * 119.96435 * 179.97438 * 16 14 13 33 33 H 1.08992 * 109.47048 * 135.02435 * 18 17 16 34 34 H 0.96705 * 113.99957 * 59.99204 * 19 18 17 35 35 H 1.48501 * 109.99951 * 58.68369 * 20 18 17 36 36 H 1.48499 * 109.99623 * 180.02562 * 20 18 17 37 37 H 1.07995 * 120.03325 * 179.97438 * 23 21 17 38 38 H 1.09009 * 113.60754 * 334.56785 * 24 3 2 39 39 H 1.08993 * 113.61815 * 203.67009 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7357 2.0796 1.2909 5 9 0.4212 2.5583 1.2769 6 9 1.9116 1.2316 2.3896 7 9 2.6232 3.1568 1.3863 8 6 1.7151 2.1112 -1.2761 9 6 2.9882 1.4863 -1.8707 10 1 3.5814 2.1834 -2.4626 11 6 2.7412 0.1579 -2.5887 12 8 3.9531 -0.2837 -3.2038 13 6 3.9058 -1.4569 -3.8882 14 6 5.0464 -1.9449 -4.5108 15 35 6.6674 -0.9766 -4.4082 16 6 4.9968 -3.1386 -5.2061 17 6 3.8126 -3.8474 -5.2817 18 6 3.7616 -5.1488 -6.0400 19 8 3.0914 -4.9481 -7.2860 20 14 5.4958 -5.7507 -6.3576 21 6 2.6727 -3.3632 -4.6616 22 9 1.5148 -4.0546 -4.7419 23 6 2.7180 -2.1688 -3.9646 24 6 3.4879 1.3219 -0.4257 25 1 -0.3633 -1.0269 0.0410 26 1 -0.3633 0.5490 0.8687 27 1 -0.3633 0.4780 -0.9098 28 1 1.7825 3.1902 -1.1366 29 1 0.8006 1.8065 -1.7847 30 1 1.9751 0.2945 -3.3519 31 1 2.4069 -0.5880 -1.8676 32 1 5.8843 -3.5178 -5.6908 33 1 3.2213 -5.8907 -5.4522 34 1 3.5179 -4.2987 -7.8619 35 1 6.2139 -5.9328 -5.0705 36 1 5.4593 -7.0332 -7.1053 37 1 1.8293 -1.7909 -3.4813 38 1 4.0043 0.3787 -0.2469 39 1 4.0399 2.1850 -0.0537 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_15096606_17321600.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 16:08:26 Heat of formation + Delta-G solvation = -232.325194 kcal Electronic energy + Delta-G solvation = -32404.197641 eV Core-core repulsion = 27054.804407 eV Total energy + Delta-G solvation = -5349.393234 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 415.013 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -51.27108 -50.18543 -48.80440 -48.74416 -41.85321 -41.03071 -39.19432 -37.48292 -36.95378 -33.34607 -32.37682 -30.77620 -29.94763 -28.24226 -27.63412 -26.79270 -26.31757 -24.38860 -23.14123 -22.67716 -20.64498 -20.05562 -19.63495 -19.53212 -19.25129 -18.52076 -18.02444 -17.43654 -17.21965 -17.13782 -16.78083 -16.47947 -16.41826 -15.95881 -15.73796 -15.67310 -15.62317 -15.57876 -15.36334 -15.20622 -15.12446 -14.94498 -14.89806 -14.51801 -14.30053 -14.11601 -14.04597 -13.39245 -13.32660 -13.18108 -12.81882 -12.68026 -12.50089 -12.31044 -12.10569 -11.95086 -11.87756 -11.68913 -11.62299 -11.23733 -10.82780 -10.54188 -10.09634 -9.39783 -5.05869 -0.34365 -0.14197 0.54446 1.20989 1.52432 1.62101 1.77063 1.94224 2.07021 2.08675 2.55386 2.61888 2.88188 2.93839 3.29371 3.30005 3.34061 3.38365 3.49408 3.57289 3.71746 3.74252 4.03140 4.22233 4.23355 4.24989 4.29279 4.33870 4.44137 4.44673 4.51164 4.58339 4.62131 4.67324 4.70550 4.79753 4.82893 4.83534 5.02113 5.30067 5.69381 6.00632 6.72987 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.003 3.997 2 O -0.345 6.345 3 C 0.035 3.965 4 C 0.431 3.569 5 F -0.185 7.185 6 F -0.189 7.189 7 F -0.176 7.176 8 C -0.133 4.133 9 C -0.091 4.091 10 H 0.119 0.881 11 C 0.060 3.940 12 O -0.296 6.296 13 C 0.193 3.807 14 C -0.146 4.146 15 Br -0.021 7.021 16 C -0.014 4.014 17 C -0.191 4.191 18 C -0.071 4.071 19 O -0.552 6.552 20 Si 0.777 3.223 21 C 0.166 3.834 22 F -0.134 7.134 23 C -0.240 4.240 24 C -0.114 4.114 25 H 0.110 0.890 26 H 0.045 0.955 27 H 0.073 0.927 28 H 0.124 0.876 29 H 0.108 0.892 30 H 0.088 0.912 31 H 0.084 0.916 32 H 0.174 0.826 33 H 0.103 0.897 34 H 0.397 0.603 35 H -0.278 1.278 36 H -0.291 1.291 37 H 0.165 0.835 38 H 0.090 0.910 39 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.523 3.346 -3.288 4.721 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 O -0.263 6.263 3 C -0.008 4.008 4 C 0.377 3.623 5 F -0.166 7.166 6 F -0.171 7.171 7 F -0.158 7.158 8 C -0.170 4.170 9 C -0.109 4.109 10 H 0.137 0.863 11 C -0.014 4.014 12 O -0.209 6.209 13 C 0.144 3.856 14 C -0.226 4.226 15 Br 0.065 6.935 16 C -0.033 4.033 17 C -0.194 4.194 18 C -0.180 4.180 19 O -0.361 6.361 20 Si 0.681 3.319 21 C 0.146 3.854 22 F -0.112 7.112 23 C -0.260 4.260 24 C -0.151 4.151 25 H 0.128 0.872 26 H 0.063 0.937 27 H 0.091 0.909 28 H 0.142 0.858 29 H 0.126 0.874 30 H 0.106 0.894 31 H 0.102 0.898 32 H 0.191 0.809 33 H 0.120 0.880 34 H 0.247 0.753 35 H -0.204 1.204 36 H -0.218 1.218 37 H 0.182 0.818 38 H 0.108 0.892 39 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 1.501 2.610 -2.791 4.106 hybrid contribution -1.913 -0.237 1.155 2.247 sum -0.412 2.373 -1.636 2.912 Atomic orbital electron populations 1.23293 0.78770 1.05117 1.02048 1.88070 1.22004 1.22411 1.93850 1.24223 1.00704 0.86317 0.89535 1.21566 0.74076 0.78697 0.87967 1.93178 1.37362 1.89200 1.96865 1.93187 1.95025 1.70902 1.57958 1.93172 1.68553 1.57433 1.96611 1.23632 0.99871 1.01497 0.92009 1.22003 0.97907 0.95974 0.94999 0.86338 1.23066 0.84830 0.96435 0.97100 1.86178 1.37114 1.33709 1.63857 1.18290 0.91706 0.85693 0.89918 1.21150 0.92749 0.99686 1.09037 1.96797 1.25131 1.73634 1.97973 1.20824 0.97343 0.90753 0.94371 1.20344 0.92879 1.00810 1.05330 1.25124 1.11143 0.95328 0.86387 1.86519 1.55963 1.66035 1.27557 0.93938 0.73828 0.82444 0.81715 1.17464 0.81569 0.90266 0.96113 1.91534 1.46989 1.78496 1.94199 1.21286 0.99795 0.96965 1.07945 1.23343 0.90531 1.05741 0.95534 0.87179 0.93667 0.90863 0.85807 0.87373 0.89436 0.89762 0.80936 0.87996 0.75264 1.20386 1.21850 0.81768 0.89163 0.85769 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 10.44 113.37 1.18 1.17 16 2 O -0.35 0.49 8.35 -148.98 -1.24 -0.76 16 3 C 0.03 -0.10 0.85 -10.26 -0.01 -0.11 16 4 C 0.43 0.56 2.52 71.99 0.18 0.74 16 5 F -0.18 -0.33 15.27 44.97 0.69 0.36 16 6 F -0.19 -1.10 17.09 44.97 0.77 -0.33 16 7 F -0.18 -0.25 15.82 44.97 0.71 0.46 16 8 C -0.13 1.06 6.51 31.12 0.20 1.27 16 9 C -0.09 0.64 4.20 -10.27 -0.04 0.59 16 10 H 0.12 -0.99 8.14 -2.38 -0.02 -1.01 16 11 C 0.06 -0.32 4.32 71.98 0.31 -0.01 16 12 O -0.30 0.29 9.47 -92.56 -0.88 -0.58 16 13 C 0.19 0.02 6.67 22.51 0.15 0.17 16 14 C -0.15 0.00 6.24 22.40 0.14 0.14 16 15 Br -0.02 0.00 33.15 -20.37 -0.68 -0.68 16 16 C -0.01 0.03 8.39 22.26 0.19 0.22 16 17 C -0.19 0.02 5.27 -19.81 -0.10 -0.08 16 18 C -0.07 0.02 2.45 71.24 0.17 0.19 16 19 O -0.55 -0.26 12.88 -148.98 -1.92 -2.18 16 20 Si 0.78 -2.41 29.91 68.60 2.05 -0.36 16 21 C 0.17 0.37 7.24 22.36 0.16 0.54 16 22 F -0.13 -0.78 16.75 44.97 0.75 -0.02 16 23 C -0.24 0.10 9.02 22.41 0.20 0.30 16 24 C -0.11 0.50 6.89 31.12 0.21 0.72 16 25 H 0.11 -0.74 8.14 -2.39 -0.02 -0.76 16 26 H 0.04 -0.11 6.29 -2.39 -0.02 -0.13 16 27 H 0.07 -0.64 6.74 -2.39 -0.02 -0.65 16 28 H 0.12 -1.19 8.07 -2.39 -0.02 -1.21 16 29 H 0.11 -1.13 6.68 -2.39 -0.02 -1.15 16 30 H 0.09 -0.73 7.66 -2.39 -0.02 -0.75 16 31 H 0.08 -0.36 5.64 -2.39 -0.01 -0.37 16 32 H 0.17 -1.30 5.12 -2.91 -0.01 -1.32 16 33 H 0.10 0.23 7.90 -2.39 -0.02 0.21 16 34 H 0.40 -3.41 8.70 -74.05 -0.64 -4.06 16 35 H -0.28 -0.41 7.11 99.48 0.71 0.30 16 36 H -0.29 -1.21 7.11 99.48 0.71 -0.50 16 37 H 0.16 -0.65 6.30 -2.91 -0.02 -0.67 16 38 H 0.09 -0.21 8.10 -2.38 -0.02 -0.23 16 39 H 0.12 -0.73 7.00 -2.39 -0.02 -0.74 16 Total: 0.00 -15.05 354.40 3.75 -11.30 By element: Atomic # 1 Polarization: -13.59 SS G_CDS: 0.54 Total: -13.05 kcal Atomic # 6 Polarization: 2.90 SS G_CDS: 2.95 Total: 5.85 kcal Atomic # 8 Polarization: 0.52 SS G_CDS: -4.04 Total: -3.52 kcal Atomic # 9 Polarization: -2.46 SS G_CDS: 2.92 Total: 0.46 kcal Atomic # 14 Polarization: -2.41 SS G_CDS: 2.05 Total: -0.36 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -0.68 Total: -0.68 kcal Total: -15.05 3.75 -11.30 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15096606_17321600.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -221.025 kcal (2) G-P(sol) polarization free energy of solvation -15.055 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -236.079 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.754 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.301 kcal (6) G-S(sol) free energy of system = (1) + (5) -232.325 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds