Wall clock time and date at job start Tue Mar 9 2021 16:12:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35919 * 117.00019 * 2 1 4 4 C 1.38622 * 120.01372 * 359.72197 * 3 2 1 5 5 C 1.38630 * 119.90318 * 179.77352 * 4 3 2 6 6 O 1.35927 * 120.03442 * 180.23184 * 5 4 3 7 7 C 1.42902 * 116.99896 * 0.27127 * 6 5 4 8 8 C 1.52996 * 109.47103 * 179.97438 * 7 6 5 9 9 H 1.09002 * 112.85171 * 314.67031 * 8 7 6 10 10 C 1.53788 * 113.60988 * 85.86156 * 8 7 6 11 11 C 1.53959 * 87.01447 * 139.95391 * 10 8 7 12 12 H 1.08997 * 113.61540 * 89.19993 * 11 10 8 13 13 O 1.42905 * 113.66169 * 220.06816 * 11 10 8 14 14 C 1.42902 * 114.00026 * 247.55646 * 13 11 10 15 15 C 1.53001 * 109.47068 * 60.00079 * 14 13 11 16 16 C 1.52990 * 109.47280 * 180.02562 * 14 13 11 17 17 C 1.53001 * 109.47036 * 300.00457 * 14 13 11 18 18 C 1.53773 * 113.61382 * 183.46682 * 8 7 6 19 19 C 1.38840 * 119.93466 * 0.50357 * 5 4 3 20 20 Cl 1.73603 * 119.98091 * 179.74988 * 19 5 4 21 21 C 1.38268 * 120.03355 * 359.72153 * 19 5 4 22 22 C 1.38176 * 120.09961 * 0.05021 * 21 19 5 23 23 C 1.50693 * 119.97315 * 179.97438 * 22 21 19 24 24 O 1.42899 * 109.47177 * 104.97806 * 23 22 21 25 25 Si 1.86303 * 109.47059 * 344.97795 * 23 22 21 26 26 H 1.09001 * 109.46558 * 60.00263 * 1 2 3 27 27 H 1.09001 * 109.47103 * 179.97438 * 1 2 3 28 28 H 1.09000 * 109.47187 * 300.00215 * 1 2 3 29 29 H 1.08006 * 120.05181 * 0.02562 * 4 3 2 30 30 H 1.08998 * 109.46630 * 300.00504 * 7 6 5 31 31 H 1.08995 * 109.46769 * 59.99818 * 7 6 5 32 32 H 1.08995 * 113.61452 * 254.52763 * 10 8 7 33 33 H 1.08998 * 113.61807 * 25.43897 * 10 8 7 34 34 H 1.08999 * 109.46988 * 59.99781 * 15 14 13 35 35 H 1.08992 * 109.47171 * 180.02562 * 15 14 13 36 36 H 1.09005 * 109.46964 * 300.00161 * 15 14 13 37 37 H 1.09004 * 109.47558 * 60.00167 * 16 14 13 38 38 H 1.09004 * 109.47249 * 180.02562 * 16 14 13 39 39 H 1.09003 * 109.47428 * 300.00076 * 16 14 13 40 40 H 1.08999 * 109.47122 * 59.99835 * 17 14 13 41 41 H 1.09001 * 109.47167 * 179.97438 * 17 14 13 42 42 H 1.09000 * 109.47268 * 300.00036 * 17 14 13 43 43 H 1.09004 * 113.61704 * 334.57401 * 18 8 7 44 44 H 1.09004 * 113.61150 * 105.47053 * 18 8 7 45 45 H 1.08006 * 119.95295 * 180.02562 * 21 19 5 46 46 H 1.09001 * 109.47485 * 224.97630 * 23 22 21 47 47 H 0.96699 * 113.99958 * 300.00063 * 24 23 22 48 48 H 1.48508 * 109.99898 * 58.68152 * 25 23 22 49 49 H 1.48502 * 109.99958 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0461 1.2110 0.0000 4 6 1.2914 2.3738 -0.0058 5 6 1.9231 3.6078 -0.0011 6 8 1.1857 4.7496 -0.0020 7 6 -0.2359 4.6038 -0.0020 8 6 -0.8904 5.9867 -0.0024 9 1 -0.4332 6.6717 0.7117 10 6 -1.0619 6.5865 -1.4081 11 6 -2.4369 7.0935 -0.9362 12 1 -2.4041 8.0821 -0.4783 13 8 -3.4625 6.9732 -1.9241 14 6 -3.9429 8.2249 -2.4186 15 6 -2.7879 8.9976 -3.0587 16 6 -5.0320 7.9762 -3.4638 17 6 -4.5235 9.0411 -1.2620 18 6 -2.4251 5.9419 0.0828 19 6 3.3099 3.6762 -0.0010 20 17 4.1022 5.2209 -0.0016 21 6 4.0601 2.5148 0.0000 22 6 3.4319 1.2841 0.0001 23 6 4.2523 0.0200 0.0007 24 8 4.2190 -0.5688 1.3023 25 14 6.0136 0.4226 -0.4540 26 1 -0.3632 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3633 0.5139 0.8900 29 1 0.2128 2.3185 -0.0099 30 1 -0.5447 4.0548 -0.8915 31 1 -0.5448 4.0563 0.8884 32 1 -0.3543 7.3848 -1.6315 33 1 -1.1203 5.8378 -2.1982 34 1 -2.3742 8.4161 -3.8826 35 1 -3.1542 9.9525 -3.4354 36 1 -2.0122 9.1748 -2.3136 37 1 -5.8549 7.4259 -3.0075 38 1 -5.3982 8.9310 -3.8413 39 1 -4.6188 7.3945 -4.2879 40 1 -3.7478 9.2183 -0.5170 41 1 -4.8896 9.9961 -1.6391 42 1 -5.3464 8.4907 -0.8059 43 1 -2.8568 5.0166 -0.2989 44 1 -2.8164 6.2205 1.0612 45 1 5.1387 2.5695 0.0005 46 1 3.8406 -0.6807 -0.7257 47 1 4.5710 0.0002 2.0005 48 1 6.5760 1.4017 0.5107 49 1 6.8332 -0.8157 -0.4563 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_15096628_14598384.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 16:12:44 Heat of formation + Delta-G solvation = -101.181249 kcal Electronic energy + Delta-G solvation = -30127.262196 eV Core-core repulsion = 25856.094854 eV Total energy + Delta-G solvation = -4271.167342 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.147 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -41.93451 -40.97312 -40.01223 -38.73907 -38.19959 -37.60641 -36.79351 -33.92209 -32.23052 -31.31773 -29.69174 -28.43253 -28.35834 -28.17635 -26.65930 -26.30174 -24.31177 -23.19726 -22.57399 -20.84766 -20.68904 -19.95731 -18.53797 -18.21953 -17.67675 -17.44460 -17.28443 -16.78596 -16.58191 -16.49235 -16.05760 -15.97143 -15.76405 -15.50395 -15.46483 -15.03184 -14.57614 -14.52520 -14.21419 -14.03771 -13.76514 -13.44543 -13.32628 -13.27710 -13.06879 -12.91705 -12.87058 -12.76695 -12.68098 -12.65159 -12.60057 -12.37124 -12.22603 -11.96889 -11.86040 -11.73237 -11.68094 -11.51902 -11.33425 -11.18299 -10.57644 -10.36358 -9.91635 -9.06616 -4.93116 -0.04582 0.05685 1.14106 1.28997 1.56409 1.89405 1.93460 2.18453 2.30557 2.73597 3.41987 3.45274 3.46988 3.54490 3.67265 3.73263 3.76452 3.80388 3.90447 3.97474 4.05154 4.07827 4.11267 4.19330 4.21632 4.27422 4.30418 4.36527 4.45751 4.51926 4.61362 4.66154 4.67336 4.73941 4.77403 4.77823 4.78334 4.83286 4.84933 4.91372 4.93687 4.98912 5.01577 5.12127 5.15913 5.27441 5.31209 5.32639 5.38336 6.00448 6.26149 6.41039 6.52344 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.315 6.315 3 C 0.192 3.808 4 C -0.288 4.288 5 C 0.182 3.818 6 O -0.307 6.307 7 C 0.066 3.934 8 C -0.103 4.103 9 H 0.105 0.895 10 C -0.148 4.148 11 C 0.059 3.941 12 H 0.098 0.902 13 O -0.380 6.380 14 C 0.099 3.901 15 C -0.174 4.174 16 C -0.139 4.139 17 C -0.177 4.177 18 C -0.120 4.120 19 C -0.118 4.118 20 Cl -0.061 7.061 21 C -0.035 4.035 22 C -0.183 4.183 23 C -0.064 4.064 24 O -0.544 6.544 25 Si 0.760 3.240 26 H 0.070 0.930 27 H 0.117 0.883 28 H 0.066 0.934 29 H 0.163 0.837 30 H 0.075 0.925 31 H 0.079 0.921 32 H 0.069 0.931 33 H 0.083 0.917 34 H 0.056 0.944 35 H 0.074 0.926 36 H 0.059 0.941 37 H 0.059 0.941 38 H 0.083 0.917 39 H 0.057 0.943 40 H 0.062 0.938 41 H 0.076 0.924 42 H 0.060 0.940 43 H 0.093 0.907 44 H 0.088 0.912 45 H 0.160 0.840 46 H 0.117 0.883 47 H 0.383 0.617 48 H -0.271 1.271 49 H -0.297 1.297 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.178 2.169 -1.243 4.869 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.227 6.227 3 C 0.144 3.856 4 C -0.308 4.308 5 C 0.134 3.866 6 O -0.220 6.220 7 C -0.009 4.009 8 C -0.121 4.121 9 H 0.124 0.876 10 C -0.185 4.185 11 C 0.001 3.999 12 H 0.116 0.884 13 O -0.300 6.300 14 C 0.060 3.940 15 C -0.231 4.231 16 C -0.197 4.197 17 C -0.234 4.234 18 C -0.157 4.157 19 C -0.146 4.146 20 Cl -0.032 7.032 21 C -0.053 4.053 22 C -0.184 4.184 23 C -0.173 4.173 24 O -0.352 6.352 25 Si 0.664 3.336 26 H 0.089 0.911 27 H 0.135 0.865 28 H 0.084 0.916 29 H 0.181 0.819 30 H 0.093 0.907 31 H 0.097 0.903 32 H 0.088 0.912 33 H 0.101 0.899 34 H 0.076 0.924 35 H 0.093 0.907 36 H 0.078 0.922 37 H 0.078 0.922 38 H 0.102 0.898 39 H 0.076 0.924 40 H 0.081 0.919 41 H 0.095 0.905 42 H 0.079 0.921 43 H 0.112 0.888 44 H 0.106 0.894 45 H 0.177 0.823 46 H 0.135 0.865 47 H 0.232 0.768 48 H -0.198 1.198 49 H -0.224 1.224 Dipole moment (debyes) X Y Z Total from point charges -3.518 1.643 -1.397 4.127 hybrid contribution -0.426 0.347 1.261 1.375 sum -3.944 1.990 -0.136 4.420 Atomic orbital electron populations 1.23433 0.76305 1.05884 1.02482 1.86186 1.23403 1.25964 1.87146 1.18719 0.91520 0.84340 0.90985 1.21406 1.01935 0.90469 1.16965 1.18485 0.89496 0.85833 0.92745 1.86181 1.20479 1.28076 1.87274 1.23071 0.76394 0.98751 1.02660 1.22260 0.95504 0.95512 0.98842 0.87644 1.23612 0.97070 1.01160 0.96703 1.23702 0.87141 0.99263 0.89794 0.88410 1.88005 1.54937 1.29831 1.57202 1.21660 0.94093 0.84144 0.94087 1.22444 0.98331 1.01000 1.01365 1.21792 0.97258 1.02963 0.97645 1.22451 1.01603 1.00940 0.98433 1.23191 0.93349 0.99585 0.99619 1.20051 0.89729 0.88160 1.16636 1.98369 1.79612 1.27843 1.97377 1.20798 1.00707 0.88778 0.95067 1.19474 0.91528 0.95493 1.11948 1.24961 1.10068 0.94315 0.87907 1.86607 1.85502 1.45922 1.17191 0.94132 0.71905 0.78274 0.89247 0.91133 0.86456 0.91553 0.81930 0.90687 0.90266 0.91223 0.89872 0.92445 0.90657 0.92198 0.92176 0.89844 0.92394 0.91890 0.90516 0.92056 0.88815 0.89388 0.82302 0.86506 0.76765 1.19768 1.22432 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.31 -0.98 9.82 -92.64 -0.91 -1.89 16 3 C 0.19 0.60 6.66 22.49 0.15 0.75 16 4 C -0.29 -0.31 8.02 22.46 0.18 -0.13 16 5 C 0.18 0.66 6.68 22.51 0.15 0.81 16 6 O -0.31 -0.96 9.59 -92.72 -0.89 -1.85 16 7 C 0.07 -0.17 4.56 71.98 0.33 0.16 16 8 C -0.10 0.30 4.00 -10.27 -0.04 0.26 16 9 H 0.11 -0.29 8.14 -2.39 -0.02 -0.30 16 10 C -0.15 0.14 7.48 31.18 0.23 0.37 16 11 C 0.06 -0.07 2.82 31.18 0.09 0.01 16 12 H 0.10 -0.26 5.54 -2.39 -0.01 -0.28 16 13 O -0.38 -0.98 10.00 -148.98 -1.49 -2.47 16 14 C 0.10 -0.03 1.11 -10.80 -0.01 -0.04 16 15 C -0.17 0.24 8.39 71.98 0.60 0.84 16 16 C -0.14 0.14 8.84 71.98 0.64 0.78 16 17 C -0.18 0.41 8.38 71.98 0.60 1.01 16 18 C -0.12 0.45 7.47 31.12 0.23 0.68 16 19 C -0.12 -0.53 6.33 22.42 0.14 -0.39 16 20 Cl -0.06 -0.33 28.50 -2.72 -0.08 -0.41 16 21 C -0.04 -0.07 8.43 22.26 0.19 0.11 16 22 C -0.18 -0.48 5.27 -19.75 -0.10 -0.58 16 23 C -0.06 -0.13 2.37 71.23 0.17 0.04 16 24 O -0.54 -2.72 12.88 -148.98 -1.92 -4.64 16 25 Si 0.76 -0.38 30.24 68.60 2.07 1.69 16 26 H 0.07 -0.49 7.65 -2.39 -0.02 -0.50 16 27 H 0.12 -0.82 8.14 -2.39 -0.02 -0.84 16 28 H 0.07 -0.41 7.67 -2.39 -0.02 -0.43 16 29 H 0.16 -0.61 4.53 -2.91 -0.01 -0.62 16 30 H 0.07 -0.30 7.38 -2.39 -0.02 -0.31 16 31 H 0.08 -0.40 7.67 -2.39 -0.02 -0.42 16 32 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 33 H 0.08 0.05 7.92 -2.39 -0.02 0.03 16 34 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 35 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 36 H 0.06 -0.09 7.02 -2.38 -0.02 -0.11 16 37 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 38 H 0.08 -0.31 8.14 -2.38 -0.02 -0.33 16 39 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 40 H 0.06 -0.19 6.24 -2.39 -0.01 -0.21 16 41 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 42 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 43 H 0.09 -0.33 8.10 -2.38 -0.02 -0.35 16 44 H 0.09 -0.48 8.14 -2.38 -0.02 -0.50 16 45 H 0.16 -0.11 4.85 -2.91 -0.01 -0.13 16 46 H 0.12 0.25 7.82 -2.39 -0.02 0.23 16 47 H 0.38 -0.40 8.70 -74.06 -0.64 -1.05 16 48 H -0.27 -0.50 6.68 99.48 0.66 0.17 16 49 H -0.30 -1.98 7.11 99.48 0.71 -1.27 16 Total: 0.00 -13.55 402.14 1.76 -11.79 By element: Atomic # 1 Polarization: -8.30 SS G_CDS: 0.31 Total: -7.99 kcal Atomic # 6 Polarization: 1.11 SS G_CDS: 4.66 Total: 5.76 kcal Atomic # 8 Polarization: -5.64 SS G_CDS: -5.21 Total: -10.85 kcal Atomic # 14 Polarization: -0.38 SS G_CDS: 2.07 Total: 1.69 kcal Atomic # 17 Polarization: -0.33 SS G_CDS: -0.08 Total: -0.41 kcal Total: -13.55 1.76 -11.79 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15096628_14598384.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.388 kcal (2) G-P(sol) polarization free energy of solvation -13.554 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.942 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.761 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.793 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.181 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds