Wall clock time and date at job start Tue Mar 9 2021 16:35:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35915 * 117.00092 * 2 1 4 4 C 1.38627 * 120.01996 * 5.27811 * 3 2 1 5 5 C 1.38616 * 119.90743 * 180.27999 * 4 3 2 6 6 O 1.35922 * 120.03740 * 179.72697 * 5 4 3 7 7 C 1.42908 * 116.99550 * 6.14798 * 6 5 4 8 8 Si 1.86305 * 109.46972 * 77.84642 * 7 6 5 9 9 C 1.86292 * 109.47150 * 65.57729 * 8 7 6 10 10 C 1.86296 * 109.46917 * 185.58173 * 8 7 6 11 11 C 1.86300 * 109.46825 * 305.57735 * 8 7 6 12 12 C 1.38843 * 119.93844 * 359.47478 * 5 4 3 13 13 Cl 1.73601 * 119.98660 * 180.25166 * 12 5 4 14 14 C 1.38281 * 120.02985 * 0.53053 * 12 5 4 15 15 C 1.38168 * 120.09476 * 359.74137 * 14 12 5 16 16 C 1.50696 * 119.97069 * 179.97438 * 15 14 12 17 17 O 1.42894 * 109.47745 * 254.98588 * 16 15 14 18 18 Si 1.86310 * 109.46860 * 14.98563 * 16 15 14 19 19 H 1.48496 * 109.46927 * 59.99721 * 18 16 15 20 20 H 1.48498 * 109.46974 * 179.97438 * 18 16 15 21 21 H 1.48506 * 109.46698 * 299.99723 * 18 16 15 22 22 H 1.09004 * 109.46757 * 301.51677 * 1 2 3 23 23 H 1.08993 * 109.47043 * 61.51754 * 1 2 3 24 24 H 1.08998 * 109.47222 * 181.51777 * 1 2 3 25 25 H 1.08003 * 120.04363 * 0.02562 * 4 3 2 26 26 H 1.08993 * 109.47211 * 197.84074 * 7 6 5 27 27 H 1.08997 * 109.46757 * 317.84765 * 7 6 5 28 28 H 1.08994 * 109.47455 * 60.00287 * 9 8 7 29 29 H 1.09010 * 109.47107 * 180.02562 * 9 8 7 30 30 H 1.08997 * 109.47571 * 299.99729 * 9 8 7 31 31 H 1.08996 * 109.47353 * 59.99995 * 10 8 7 32 32 H 1.09001 * 109.47090 * 179.97438 * 10 8 7 33 33 H 1.08994 * 109.46930 * 299.99248 * 10 8 7 34 34 H 1.08998 * 109.47564 * 53.94975 * 11 8 7 35 35 H 1.09001 * 109.47471 * 173.94565 * 11 8 7 36 36 H 1.08995 * 109.47475 * 293.94398 * 11 8 7 37 37 H 1.08000 * 119.94991 * 179.72667 * 14 12 5 38 38 H 1.09004 * 109.47344 * 134.98040 * 16 15 14 39 39 H 0.96697 * 114.00396 * 179.97438 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0461 1.2110 0.0000 4 6 1.2961 2.3716 0.1104 5 6 1.9273 3.6057 0.1043 6 8 1.1940 4.7455 0.2068 7 6 -0.2058 4.5963 0.4532 8 14 -0.4808 4.2007 2.2529 9 6 0.0352 5.6564 3.2946 10 6 -2.2857 3.8398 2.5405 11 6 0.5332 2.7102 2.7230 12 6 3.3099 3.6762 -0.0013 13 17 4.1023 5.2209 -0.0025 14 6 4.0556 2.5169 -0.1114 15 6 3.4273 1.2864 -0.1112 16 6 4.2427 0.0248 -0.2319 17 8 4.1010 -0.5098 -1.5494 18 14 6.0363 0.4113 0.0919 19 1 6.1835 0.9668 1.4611 20 1 6.8397 -0.8320 -0.0265 21 1 6.5150 1.4070 -0.9006 22 1 -0.3633 0.5372 0.8761 23 1 -0.3633 0.4901 -0.9032 24 1 -0.3633 -1.0273 0.0272 25 1 0.2210 2.3145 0.1969 26 1 -0.7197 5.5243 0.2027 27 1 -0.5984 3.7861 -0.1610 28 1 -0.5580 6.5285 3.0196 29 1 -0.1253 5.4248 4.3476 30 1 1.0912 5.8676 3.1264 31 1 -2.5875 2.9880 1.9310 32 1 -2.4465 3.6078 3.5934 33 1 -2.8789 4.7118 2.2655 34 1 1.5758 2.8807 2.4549 35 1 0.4570 2.5430 3.7974 36 1 0.1600 1.8346 2.1918 37 1 5.1307 2.5735 -0.1980 38 1 3.8913 -0.7060 0.4965 39 1 4.6002 -1.3243 -1.6993 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_7_15096628_3095236.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 16:35:51 Heat of formation + Delta-G solvation = -108.416338 kcal Electronic energy + Delta-G solvation = -21988.529850 eV Core-core repulsion = 18661.438477 eV Total energy + Delta-G solvation = -3327.091373 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 304.086 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -41.92293 -39.98632 -38.45856 -37.62145 -36.82467 -32.41282 -31.38178 -29.75517 -28.76759 -28.39900 -28.23361 -27.72722 -25.89278 -23.52772 -22.48834 -19.94513 -18.48405 -18.29532 -17.51489 -17.12731 -16.95338 -16.55459 -16.19982 -15.80153 -15.51964 -14.85342 -14.44464 -14.33913 -14.21430 -14.02879 -13.88597 -13.80792 -13.49221 -13.31388 -13.23158 -13.20625 -13.04078 -12.86648 -12.58662 -12.42824 -12.29524 -12.14564 -11.84826 -11.76869 -11.55387 -10.87514 -10.82413 -10.72116 -10.25154 -9.66133 -8.95680 -0.02932 0.07503 1.11411 1.16035 1.43292 1.48393 1.51039 1.73217 1.79339 1.88910 2.18827 2.31211 2.34683 2.54802 3.42778 3.58094 3.73629 3.92629 4.12116 4.15719 4.20733 4.24155 4.35275 4.40499 4.62521 4.69935 4.74569 4.76008 4.78407 4.80602 4.82754 4.84002 4.85662 4.88663 5.02906 5.28318 5.52021 5.59577 5.62665 6.03105 6.29915 6.86651 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 O -0.310 6.310 3 C 0.195 3.805 4 C -0.280 4.280 5 C 0.176 3.824 6 O -0.291 6.291 7 C -0.271 4.271 8 Si 1.049 2.951 9 C -0.465 4.465 10 C -0.449 4.449 11 C -0.464 4.464 12 C -0.123 4.123 13 Cl -0.065 7.065 14 C -0.049 4.049 15 C -0.154 4.154 16 C -0.062 4.062 17 O -0.559 6.559 18 Si 0.960 3.040 19 H -0.256 1.256 20 H -0.246 1.246 21 H -0.263 1.263 22 H 0.075 0.925 23 H 0.065 0.935 24 H 0.122 0.878 25 H 0.173 0.827 26 H 0.126 0.874 27 H 0.087 0.913 28 H 0.072 0.928 29 H 0.072 0.928 30 H 0.058 0.942 31 H 0.081 0.919 32 H 0.076 0.924 33 H 0.076 0.924 34 H 0.056 0.944 35 H 0.075 0.925 36 H 0.077 0.923 37 H 0.148 0.852 38 H 0.088 0.912 39 H 0.395 0.605 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.733 -3.532 1.919 6.210 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 O -0.223 6.223 3 C 0.147 3.853 4 C -0.300 4.300 5 C 0.128 3.872 6 O -0.203 6.203 7 C -0.389 4.389 8 Si 1.241 2.759 9 C -0.571 4.571 10 C -0.558 4.558 11 C -0.571 4.571 12 C -0.151 4.151 13 Cl -0.036 7.036 14 C -0.067 4.067 15 C -0.155 4.155 16 C -0.172 4.172 17 O -0.368 6.368 18 Si 0.784 3.216 19 H -0.179 1.179 20 H -0.169 1.169 21 H -0.188 1.188 22 H 0.094 0.906 23 H 0.084 0.916 24 H 0.140 0.860 25 H 0.190 0.810 26 H 0.144 0.856 27 H 0.105 0.895 28 H 0.092 0.908 29 H 0.091 0.909 30 H 0.077 0.923 31 H 0.100 0.900 32 H 0.095 0.905 33 H 0.095 0.905 34 H 0.076 0.924 35 H 0.094 0.906 36 H 0.096 0.904 37 H 0.165 0.835 38 H 0.106 0.894 39 H 0.245 0.755 Dipole moment (debyes) X Y Z Total from point charges -4.032 -2.670 1.952 5.215 hybrid contribution -0.153 -0.087 -0.147 0.229 sum -4.185 -2.757 1.805 5.326 Atomic orbital electron populations 1.23574 0.76392 1.06278 1.02689 1.86152 1.23329 1.25538 1.87233 1.18577 0.91136 0.84607 0.90945 1.21425 1.02351 0.90348 1.15827 1.18458 0.89319 0.86444 0.92974 1.86129 1.21614 1.27303 1.85284 1.28691 0.79589 1.08931 1.21658 0.78950 0.67522 0.66237 0.63158 1.26278 1.05453 1.15297 1.10068 1.26056 1.18009 1.05985 1.05768 1.26672 1.08982 1.15189 1.06219 1.19999 0.90123 0.87806 1.17164 1.98357 1.79801 1.28001 1.97452 1.20726 1.00452 0.89456 0.96084 1.18616 0.91677 0.94153 1.11059 1.24454 1.09266 0.95001 0.88483 1.86476 1.74869 1.46383 1.29092 0.85592 0.74688 0.81029 0.80314 1.17934 1.16933 1.18814 0.90649 0.91597 0.85991 0.81010 0.85635 0.89498 0.90839 0.90887 0.92281 0.89975 0.90473 0.90455 0.92442 0.90612 0.90397 0.83509 0.89390 0.75466 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.03 9.84 113.37 1.12 1.09 16 2 O -0.31 -0.72 9.82 -92.59 -0.91 -1.63 16 3 C 0.19 0.84 6.65 22.49 0.15 0.99 16 4 C -0.28 -0.53 4.66 22.45 0.10 -0.42 16 5 C 0.18 0.95 5.17 22.50 0.12 1.07 16 6 O -0.29 -1.23 9.25 -92.67 -0.86 -2.09 16 7 C -0.27 0.95 5.31 113.37 0.60 1.55 16 8 Si 1.05 -6.52 11.69 68.60 0.80 -5.72 16 9 C -0.46 0.76 8.65 113.37 0.98 1.74 16 10 C -0.45 3.48 8.65 113.37 0.98 4.47 16 11 C -0.46 1.43 7.03 113.37 0.80 2.22 16 12 C -0.12 -0.98 6.33 22.42 0.14 -0.84 16 13 Cl -0.06 -0.56 28.50 -2.72 -0.08 -0.64 16 14 C -0.05 -0.33 8.43 22.26 0.19 -0.14 16 15 C -0.15 -0.90 5.31 -19.75 -0.10 -1.00 16 16 C -0.06 -0.13 2.36 71.23 0.17 0.04 16 17 O -0.56 -1.51 12.86 -148.98 -1.92 -3.42 16 18 Si 0.96 0.93 25.49 68.60 1.75 2.68 16 19 H -0.26 -0.62 7.11 99.48 0.71 0.09 16 20 H -0.25 0.07 7.11 99.48 0.71 0.78 16 21 H -0.26 -0.99 6.73 99.48 0.67 -0.32 16 22 H 0.08 -0.68 5.63 -2.39 -0.01 -0.70 16 23 H 0.07 -0.45 7.96 -2.39 -0.02 -0.47 16 24 H 0.12 -1.09 8.14 -2.39 -0.02 -1.11 16 25 H 0.17 -0.76 3.05 -2.91 -0.01 -0.77 16 26 H 0.13 -0.76 7.96 -2.39 -0.02 -0.78 16 27 H 0.09 -0.58 6.07 -2.39 -0.01 -0.59 16 28 H 0.07 -0.17 7.96 -2.39 -0.02 -0.19 16 29 H 0.07 -0.15 7.96 -2.38 -0.02 -0.17 16 30 H 0.06 0.10 7.96 -2.39 -0.02 0.08 16 31 H 0.08 -0.79 7.96 -2.39 -0.02 -0.81 16 32 H 0.08 -0.55 7.96 -2.39 -0.02 -0.57 16 33 H 0.08 -0.61 7.96 -2.39 -0.02 -0.63 16 34 H 0.06 0.07 6.16 -2.39 -0.01 0.06 16 35 H 0.07 -0.27 7.96 -2.39 -0.02 -0.29 16 36 H 0.08 -0.41 4.94 -2.39 -0.01 -0.42 16 37 H 0.15 0.72 4.88 -2.91 -0.01 0.71 16 38 H 0.09 -0.05 7.82 -2.38 -0.02 -0.07 16 39 H 0.40 -2.57 8.74 -74.06 -0.65 -3.22 16 Total: 0.00 -14.63 324.04 5.18 -9.45 By element: Atomic # 1 Polarization: -10.54 SS G_CDS: 1.15 Total: -9.39 kcal Atomic # 6 Polarization: 5.52 SS G_CDS: 5.24 Total: 10.76 kcal Atomic # 8 Polarization: -3.46 SS G_CDS: -3.68 Total: -7.15 kcal Atomic # 14 Polarization: -5.59 SS G_CDS: 2.55 Total: -3.04 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -0.08 Total: -0.64 kcal Total: -14.63 5.18 -9.45 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15096628_3095236.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.969 kcal (2) G-P(sol) polarization free energy of solvation -14.628 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.180 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -9.448 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.416 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds