Wall clock time and date at job start Tue Mar 9 2021 16:41:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52995 * 109.47054 * 2 1 4 4 C 1.53003 * 109.47076 * 239.99902 * 2 1 3 5 5 Si 1.86305 * 109.47253 * 119.99945 * 2 1 3 6 6 C 1.86295 * 109.47083 * 300.00129 * 5 2 1 7 7 C 1.86298 * 109.47056 * 179.97438 * 5 2 1 8 8 O 1.63103 * 109.46991 * 60.00321 * 5 2 1 9 9 C 1.42900 * 113.99721 * 180.02562 * 8 5 2 10 10 C 1.53005 * 109.46820 * 180.02562 * 9 8 5 11 11 O 1.42898 * 109.47319 * 64.99376 * 10 9 8 12 12 C 1.35919 * 116.99662 * 179.97438 * 11 10 9 13 13 C 1.38684 * 120.04278 * 0.02562 * 12 11 10 14 14 C 1.38243 * 119.95143 * 179.97438 * 13 12 11 15 15 Br 1.89107 * 119.99080 * 180.02562 * 14 13 12 16 16 C 1.38431 * 120.02510 * 359.97438 * 14 13 12 17 17 Cl 1.73607 * 119.96555 * 180.02562 * 16 14 13 18 18 C 1.38365 * 120.07464 * 0.04352 * 16 14 13 19 19 C 1.38136 * 120.05209 * 359.97438 * 18 16 14 20 20 C 1.50697 * 120.01331 * 179.97438 * 19 18 16 21 21 O 1.42900 * 109.47511 * 105.00042 * 20 19 18 22 22 Si 1.86304 * 109.46969 * 344.99885 * 20 19 18 23 23 H 1.48500 * 109.46868 * 60.00275 * 22 20 19 24 24 H 1.48507 * 109.47003 * 179.97438 * 22 20 19 25 25 H 1.48501 * 109.47404 * 300.00014 * 22 20 19 26 26 H 1.08993 * 109.47010 * 299.99372 * 1 2 3 27 27 H 1.08998 * 109.47236 * 60.00412 * 1 2 3 28 28 H 1.09004 * 109.46540 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.47292 * 179.97438 * 3 2 1 30 30 H 1.09002 * 109.47466 * 299.99795 * 3 2 1 31 31 H 1.08996 * 109.47466 * 59.99944 * 3 2 1 32 32 H 1.08996 * 109.47321 * 299.99594 * 4 2 1 33 33 H 1.09002 * 109.47060 * 60.00440 * 4 2 1 34 34 H 1.09004 * 109.46765 * 179.97438 * 4 2 1 35 35 H 1.08997 * 109.46909 * 179.97438 * 6 5 2 36 36 H 1.08996 * 109.47177 * 300.00256 * 6 5 2 37 37 H 1.09004 * 109.46871 * 59.99928 * 6 5 2 38 38 H 1.09001 * 109.47442 * 300.00074 * 7 5 2 39 39 H 1.09003 * 109.47031 * 60.00637 * 7 5 2 40 40 H 1.08998 * 109.47038 * 179.97438 * 7 5 2 41 41 H 1.08997 * 109.47202 * 59.99838 * 9 8 5 42 42 H 1.09003 * 109.46888 * 299.99653 * 9 8 5 43 43 H 1.09006 * 109.46849 * 304.99733 * 10 9 8 44 44 H 1.09001 * 109.47050 * 185.00115 * 10 9 8 45 45 H 1.08005 * 120.02098 * 0.02562 * 13 12 11 46 46 H 1.08002 * 119.97449 * 179.70166 * 18 16 14 47 47 H 1.09004 * 109.47290 * 225.00080 * 20 19 18 48 48 H 0.96699 * 113.99578 * 59.99414 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2493 5 14 2.1511 -0.8782 1.5212 6 6 1.5301 0.0000 3.0423 7 6 4.0140 -0.8789 1.5207 8 8 1.6075 -2.4160 1.5211 9 6 2.0287 -3.1814 2.6520 10 6 1.4639 -4.5995 2.5470 11 8 2.0332 -5.2561 1.4126 12 6 1.6347 -6.5337 1.1749 13 6 0.7146 -7.1418 2.0157 14 6 0.3102 -8.4411 1.7719 15 35 -0.9449 -9.2711 2.9173 16 6 0.8228 -9.1344 0.6889 17 17 0.3133 -10.7657 0.3838 18 6 1.7411 -8.5288 -0.1505 19 6 2.1477 -7.2308 0.0905 20 6 3.1483 -6.5723 -0.8239 21 8 2.4780 -5.6313 -1.6649 22 14 3.9740 -7.8684 -1.8771 23 1 2.9495 -8.5725 -2.6895 24 1 4.9596 -7.2194 -2.7787 25 1 4.6707 -8.8463 -1.0032 26 1 -0.3633 0.5137 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3632 -1.0277 -0.0005 29 1 3.1300 1.4425 0.0005 30 1 1.6767 1.9563 -0.8900 31 1 1.6767 1.9563 0.8899 32 1 1.6768 -1.7489 -1.2492 33 1 1.6767 -0.2074 -2.1393 34 1 3.1300 -0.7209 -1.2494 35 1 1.8930 -0.5141 3.9322 36 1 1.8933 1.0276 3.0422 37 1 0.4400 -0.0001 3.0422 38 1 4.3770 -1.3930 0.6307 39 1 4.3777 0.1487 1.5206 40 1 4.3774 -1.3923 2.4109 41 1 1.6638 -2.7112 3.5652 42 1 3.1176 -3.2251 2.6758 43 1 0.3809 -4.5517 2.4334 44 1 1.7103 -5.1565 3.4509 45 1 0.3138 -6.6004 2.8600 46 1 2.1436 -9.0729 -0.9921 47 1 3.9003 -6.0555 -0.2277 48 1 2.0246 -4.9262 -1.1828 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_15163260_10264010.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 16:41:33 Heat of formation + Delta-G solvation = -154.260725 kcal Electronic energy + Delta-G solvation = -29163.114701 eV Core-core repulsion = 25027.604506 eV Total energy + Delta-G solvation = -4135.510195 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 424.043 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.75701 -39.38250 -38.01136 -37.69246 -37.08893 -36.87919 -33.86585 -31.76943 -31.23033 -30.29198 -29.45182 -29.16131 -27.90875 -27.43608 -26.50016 -25.15154 -23.13049 -22.63545 -20.47210 -19.53806 -18.43687 -18.29295 -18.01402 -17.26280 -16.84619 -16.40506 -16.11668 -15.95906 -15.65905 -15.48126 -15.34491 -14.91877 -14.85335 -14.73753 -14.43875 -14.32423 -14.04101 -13.70435 -13.63639 -13.52256 -13.33611 -13.23563 -12.99099 -12.97467 -12.95821 -12.74108 -12.44832 -12.35342 -12.26355 -12.22775 -11.98302 -11.82808 -11.76600 -11.64075 -11.51296 -11.45360 -11.33396 -11.17373 -11.03363 -10.48663 -10.13527 -10.11688 -9.34043 -0.36159 -0.11430 0.32446 1.03312 1.17025 1.30913 1.49505 1.54015 1.64591 1.83057 1.96230 1.97216 2.13369 2.32178 3.32292 3.40282 3.60489 3.71072 3.79990 3.89574 3.95634 4.00357 4.07542 4.07812 4.13548 4.17429 4.26895 4.39064 4.42885 4.55162 4.57130 4.61527 4.64088 4.64868 4.66590 4.76799 4.82127 4.85100 4.95968 5.06716 5.07465 5.08291 5.14142 5.23537 5.30171 5.36934 5.44684 5.46340 5.53634 6.01155 6.61261 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.374 4.374 3 C -0.137 4.137 4 C -0.134 4.134 5 Si 1.290 2.710 6 C -0.513 4.513 7 C -0.512 4.512 8 O -0.619 6.619 9 C 0.087 3.913 10 C 0.052 3.948 11 O -0.294 6.294 12 C 0.158 3.842 13 C -0.170 4.170 14 C -0.044 4.044 15 Br -0.018 7.018 16 C -0.046 4.046 17 Cl -0.041 7.041 18 C -0.070 4.070 19 C -0.119 4.119 20 C -0.081 4.081 21 O -0.534 6.534 22 Si 1.002 2.998 23 H -0.248 1.248 24 H -0.250 1.250 25 H -0.245 1.245 26 H 0.053 0.947 27 H 0.053 0.947 28 H 0.059 0.941 29 H 0.056 0.944 30 H 0.056 0.944 31 H 0.055 0.945 32 H 0.061 0.939 33 H 0.053 0.947 34 H 0.054 0.946 35 H 0.065 0.935 36 H 0.075 0.925 37 H 0.073 0.927 38 H 0.074 0.926 39 H 0.074 0.926 40 H 0.065 0.935 41 H 0.081 0.919 42 H 0.070 0.930 43 H 0.080 0.920 44 H 0.080 0.920 45 H 0.150 0.850 46 H 0.150 0.850 47 H 0.083 0.917 48 H 0.374 0.626 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.596 2.901 3.198 4.604 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.418 4.418 3 C -0.194 4.194 4 C -0.191 4.191 5 Si 1.421 2.579 6 C -0.615 4.615 7 C -0.613 4.613 8 O -0.578 6.578 9 C 0.011 3.989 10 C -0.023 4.023 11 O -0.207 6.207 12 C 0.110 3.890 13 C -0.191 4.191 14 C -0.125 4.125 15 Br 0.068 6.932 16 C -0.075 4.075 17 Cl -0.012 7.012 18 C -0.089 4.089 19 C -0.121 4.121 20 C -0.190 4.190 21 O -0.340 6.340 22 Si 0.821 3.179 23 H -0.172 1.172 24 H -0.173 1.173 25 H -0.168 1.168 26 H 0.072 0.928 27 H 0.072 0.928 28 H 0.078 0.922 29 H 0.075 0.925 30 H 0.075 0.925 31 H 0.074 0.926 32 H 0.080 0.920 33 H 0.072 0.928 34 H 0.073 0.927 35 H 0.085 0.915 36 H 0.094 0.906 37 H 0.092 0.908 38 H 0.093 0.907 39 H 0.093 0.907 40 H 0.084 0.916 41 H 0.098 0.902 42 H 0.088 0.912 43 H 0.098 0.902 44 H 0.098 0.902 45 H 0.168 0.832 46 H 0.167 0.833 47 H 0.101 0.899 48 H 0.222 0.778 Dipole moment (debyes) X Y Z Total from point charges 1.681 1.388 2.400 3.242 hybrid contribution -0.322 1.306 0.992 1.671 sum 1.360 2.694 3.392 4.540 Atomic orbital electron populations 1.21512 0.93838 1.01981 1.01786 1.25783 1.00636 1.02601 1.12749 1.21559 1.00786 0.94944 1.02149 1.21508 1.00626 1.00304 0.96645 0.76677 0.63016 0.53204 0.65007 1.27062 1.07060 1.09679 1.17707 1.27037 1.24993 1.04764 1.04543 1.85403 1.79169 1.46085 1.47131 1.22081 0.99445 0.89411 0.87975 1.23169 0.99480 0.92167 0.87467 1.86142 1.64486 1.22535 1.47534 1.18684 0.92717 0.84552 0.93046 1.21167 1.01045 0.94412 1.02493 1.21585 0.99196 0.95545 0.96192 1.96846 1.54356 1.80300 1.61652 1.20552 1.00894 0.88718 0.97310 1.98413 1.89772 1.17696 1.95270 1.20873 0.95529 0.93855 0.98609 1.19740 1.01882 0.93941 0.96545 1.25212 0.96054 0.99627 0.98086 1.86692 1.71851 1.40705 1.34724 0.84633 0.79022 0.75529 0.78671 1.17162 1.17335 1.16782 0.92783 0.92770 0.92167 0.92512 0.92461 0.92583 0.91995 0.92816 0.92687 0.91538 0.90602 0.90828 0.90686 0.90726 0.91557 0.90165 0.91234 0.90199 0.90208 0.83228 0.83301 0.89859 0.77787 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.09 7.85 37.16 0.29 0.38 16 2 C -0.37 0.43 0.53 -90.62 -0.05 0.38 16 3 C -0.14 0.17 7.85 37.16 0.29 0.46 16 4 C -0.13 0.08 7.85 37.16 0.29 0.37 16 5 Si 1.29 -3.11 8.45 -169.99 -1.44 -4.55 16 6 C -0.51 1.07 8.50 101.05 0.86 1.93 16 7 C -0.51 0.89 8.50 101.05 0.86 1.75 16 8 O -0.62 1.04 8.52 -40.09 -0.34 0.70 16 9 C 0.09 -0.29 5.51 37.16 0.20 -0.08 16 10 C 0.05 -0.16 5.12 37.16 0.19 0.03 16 11 O -0.29 0.24 9.00 -24.34 -0.22 0.02 16 12 C 0.16 0.02 6.62 -39.23 -0.26 -0.24 16 13 C -0.17 0.02 8.78 -39.41 -0.35 -0.32 16 14 C -0.04 -0.06 6.22 -39.51 -0.25 -0.30 16 15 Br -0.02 -0.02 32.52 -68.01 -2.21 -2.23 16 16 C -0.05 -0.08 6.32 -39.46 -0.25 -0.33 16 17 Cl -0.04 -0.08 27.73 -51.86 -1.44 -1.52 16 18 C -0.07 -0.08 8.44 -39.57 -0.33 -0.42 16 19 C -0.12 -0.09 5.28 -104.47 -0.55 -0.64 16 20 C -0.08 -0.02 2.33 36.00 0.08 0.06 16 21 O -0.53 -0.68 12.65 -35.23 -0.45 -1.13 16 22 Si 1.00 0.24 25.74 -169.99 -4.38 -4.14 16 23 H -0.25 -0.20 6.73 56.52 0.38 0.18 16 24 H -0.25 -0.30 7.11 56.52 0.40 0.11 16 25 H -0.24 0.07 7.11 56.52 0.40 0.47 16 26 H 0.05 -0.07 7.79 -51.93 -0.40 -0.47 16 27 H 0.05 -0.01 8.14 -51.93 -0.42 -0.43 16 28 H 0.06 -0.03 7.97 -51.93 -0.41 -0.45 16 29 H 0.06 -0.10 7.79 -51.93 -0.40 -0.50 16 30 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 31 H 0.06 -0.10 7.79 -51.93 -0.40 -0.51 16 32 H 0.06 -0.03 7.96 -51.93 -0.41 -0.45 16 33 H 0.05 0.00 8.14 -51.93 -0.42 -0.42 16 34 H 0.05 -0.05 7.79 -51.93 -0.40 -0.46 16 35 H 0.07 -0.18 7.48 -51.93 -0.39 -0.57 16 36 H 0.07 -0.15 7.79 -51.93 -0.40 -0.56 16 37 H 0.07 -0.13 7.79 -51.93 -0.40 -0.54 16 38 H 0.07 -0.09 7.79 -51.93 -0.40 -0.50 16 39 H 0.07 -0.13 7.79 -51.93 -0.40 -0.54 16 40 H 0.07 -0.14 7.48 -51.93 -0.39 -0.53 16 41 H 0.08 -0.43 7.21 -51.93 -0.37 -0.81 16 42 H 0.07 -0.28 7.21 -51.93 -0.37 -0.66 16 43 H 0.08 -0.27 7.66 -51.93 -0.40 -0.67 16 44 H 0.08 -0.39 7.66 -51.93 -0.40 -0.79 16 45 H 0.15 -0.34 6.30 -52.48 -0.33 -0.67 16 46 H 0.15 0.03 4.88 -52.49 -0.26 -0.23 16 47 H 0.08 -0.08 7.83 -51.93 -0.41 -0.49 16 48 H 0.37 -0.18 8.60 45.56 0.39 0.21 16 LS Contribution 416.26 15.07 6.27 6.27 Total: 0.00 -4.02 416.26 -10.23 -14.25 By element: Atomic # 1 Polarization: -3.64 SS G_CDS: -7.07 Total: -10.71 kcal Atomic # 6 Polarization: 1.99 SS G_CDS: 1.04 Total: 3.03 kcal Atomic # 8 Polarization: 0.60 SS G_CDS: -1.01 Total: -0.41 kcal Atomic # 14 Polarization: -2.87 SS G_CDS: -5.81 Total: -8.69 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.44 Total: -1.52 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.21 Total: -2.23 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -4.02 -10.23 -14.25 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_15163260_10264010.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -140.008 kcal (2) G-P(sol) polarization free energy of solvation -4.022 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.030 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.231 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.253 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.261 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds