Wall clock time and date at job start Tue Mar 9 2021 17:42:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.52999 * 109.47412 * 2 1 4 4 C 1.53001 * 109.47245 * 120.00702 * 2 1 3 5 5 C 1.53007 * 109.45319 * 179.97438 * 4 2 1 6 6 C 1.53094 * 109.41008 * 179.58603 * 5 4 2 7 7 C 1.52475 * 109.51422 * 59.18297 * 6 5 4 8 8 C 1.52480 * 110.72229 * 301.22557 * 7 6 5 9 9 C 1.52998 * 109.44004 * 59.90823 * 4 2 1 10 10 N 1.46830 * 110.54561 * 178.37307 * 7 6 5 11 11 C 1.34688 * 106.41762 * 241.22344 * 10 7 6 12 12 O 1.21530 * 123.78876 * 180.27463 * 11 10 7 13 13 N 1.33870 * 112.41796 * 0.44409 * 11 10 7 14 14 C 1.46500 * 124.19188 * 179.79775 * 13 11 10 15 15 C 1.50695 * 109.47198 * 269.69920 * 14 13 11 16 16 C 1.34520 * 125.79236 * 89.99931 * 15 14 13 17 17 C 1.41383 * 106.84084 * 179.97438 * 16 15 14 18 18 C 1.34511 * 106.84236 * 359.97438 * 17 16 15 19 19 C 1.50701 * 125.78940 * 180.02562 * 18 17 16 20 20 O 1.42896 * 109.47417 * 64.99898 * 19 18 17 21 21 Si 1.86301 * 109.47149 * 184.99914 * 19 18 17 22 22 O 1.34301 * 108.41959 * 0.26530 * 18 17 16 23 23 C 1.34906 * 111.61304 * 359.52837 * 13 11 10 24 24 O 1.21237 * 127.25506 * 180.29336 * 23 13 11 25 25 H 1.09007 * 109.46686 * 299.99506 * 1 2 3 26 26 H 1.08997 * 109.47435 * 59.99043 * 1 2 3 27 27 H 1.09002 * 109.47319 * 179.97438 * 1 2 3 28 28 H 1.09007 * 109.46686 * 240.00494 * 2 1 3 29 29 H 1.09000 * 109.47220 * 180.02562 * 3 2 1 30 30 H 1.08997 * 109.47602 * 300.00855 * 3 2 1 31 31 H 1.09007 * 109.46792 * 60.00558 * 3 2 1 32 32 H 1.08991 * 109.45131 * 299.95472 * 4 2 1 33 33 H 1.09009 * 109.48034 * 59.60699 * 5 4 2 34 34 H 1.08997 * 109.48534 * 299.57443 * 5 4 2 35 35 H 1.08997 * 109.46925 * 299.16066 * 6 5 4 36 36 H 1.09007 * 109.45809 * 179.18963 * 6 5 4 37 37 H 1.08990 * 109.46539 * 178.77419 * 8 7 6 38 38 H 1.08998 * 109.46573 * 298.75296 * 8 7 6 39 39 H 1.09002 * 109.47775 * 300.40037 * 9 4 2 40 40 H 1.09002 * 109.48264 * 60.42753 * 9 4 2 41 41 H 0.96995 * 126.79336 * 61.48115 * 10 7 6 42 42 H 1.09003 * 109.47602 * 149.69779 * 14 13 11 43 43 H 1.09004 * 109.47250 * 29.69399 * 14 13 11 44 44 H 1.07993 * 126.57449 * 359.97438 * 16 15 14 45 45 H 1.08001 * 126.57632 * 179.97438 * 17 16 15 46 46 H 1.09002 * 109.47060 * 304.99925 * 19 18 17 47 47 H 0.96708 * 114.00101 * 59.99427 * 20 19 18 48 48 H 1.48493 * 110.00101 * 179.97438 * 21 19 18 49 49 H 1.48502 * 109.99925 * 301.31801 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7214 1.2492 5 6 3.5701 -0.7217 1.2484 6 6 4.0793 -1.4347 2.5038 7 6 3.5539 -2.8659 2.5252 8 6 2.0293 -2.8813 2.5049 9 6 1.5277 -2.1631 1.2494 10 7 4.0608 -3.5833 3.7018 11 6 4.7841 -4.6187 3.2338 12 8 5.3468 -5.4267 3.9461 13 7 4.8166 -4.6555 1.8960 14 6 5.5319 -5.6696 1.1175 15 6 6.9380 -5.1981 0.8500 16 6 8.0067 -5.4255 1.6346 17 6 9.1137 -4.8083 1.0079 18 6 8.6554 -4.2412 -0.1224 19 6 9.4813 -3.4686 -1.1184 20 8 10.4356 -4.3420 -1.7254 21 14 8.3666 -2.7582 -2.4312 22 8 7.3359 -4.4758 -0.2101 23 6 4.1041 -3.6464 1.3537 24 8 3.9396 -3.4149 0.1751 25 1 -0.3633 0.5138 0.8901 26 1 -0.3634 0.5140 -0.8899 27 1 -0.3634 -1.0277 -0.0005 28 1 1.8932 -0.5138 -0.8901 29 1 3.1300 1.4424 -0.0005 30 1 1.6767 1.9564 -0.8899 31 1 1.6768 1.9563 0.8901 32 1 1.6772 -0.2070 2.1389 33 1 3.9338 0.3059 1.2411 34 1 3.9331 -1.2422 0.3622 35 1 3.7283 -0.9055 3.3897 36 1 5.1693 -1.4480 2.4969 37 1 1.6766 -3.9125 2.4987 38 1 1.6491 -2.3728 3.3909 39 1 0.4377 -2.1615 1.2429 40 1 1.8959 -2.6799 0.3631 41 1 3.9027 -3.3586 4.6320 42 1 5.0166 -5.8312 0.1707 43 1 5.5626 -6.6037 1.6785 44 1 8.0171 -5.9742 2.5647 45 1 10.1319 -4.7948 1.3678 46 1 10.0030 -2.6592 -0.6077 47 1 10.0412 -5.0874 -2.1988 48 1 9.1689 -1.9933 -3.4193 49 1 7.6258 -3.8494 -3.1135 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_7_16621382_18345148.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 17:42:55 Heat of formation + Delta-G solvation = -62.975407 kcal Electronic energy + Delta-G solvation = -33077.760154 eV Core-core repulsion = 28780.745231 eV Total energy + Delta-G solvation = -4297.014923 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.177 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -44.00919 -43.52018 -40.36915 -39.22605 -38.13153 -37.44122 -36.59001 -34.47930 -33.92959 -32.26124 -32.15397 -29.74149 -29.19165 -28.11926 -25.81663 -25.16095 -23.75001 -23.47797 -22.93013 -22.67432 -21.27152 -20.90579 -20.45839 -19.21859 -18.82256 -18.07252 -17.85282 -17.41860 -17.13677 -16.70192 -16.55174 -16.39833 -16.02861 -15.67322 -15.54104 -15.33548 -14.94054 -14.71492 -14.68524 -14.61120 -14.30511 -14.23769 -13.87402 -13.80094 -13.67031 -13.65914 -13.19282 -13.12992 -12.91957 -12.90387 -12.85959 -12.34733 -12.22687 -12.15740 -12.01972 -11.81128 -11.51145 -11.20199 -11.18409 -11.04959 -10.92999 -10.81871 -10.73659 -10.46090 -9.55015 -4.95869 0.34029 0.55734 1.09697 1.18810 1.50671 1.65396 1.72776 1.91001 1.99337 2.05424 2.78007 3.17076 3.30224 3.36455 3.41702 3.64594 3.67334 3.84988 3.88884 4.02058 4.04428 4.15673 4.16423 4.18645 4.23981 4.25975 4.35862 4.38832 4.43024 4.53448 4.54617 4.59019 4.74851 4.75510 4.76875 4.79358 4.92590 4.94890 4.95331 5.00452 5.02682 5.03782 5.08254 5.16435 5.30283 5.32530 5.45998 5.46702 5.56670 5.68188 5.90565 6.04341 6.26174 6.30731 7.03555 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.091 4.091 3 C -0.151 4.151 4 C -0.079 4.079 5 C -0.125 4.125 6 C -0.111 4.111 7 C 0.125 3.875 8 C -0.112 4.112 9 C -0.125 4.125 10 N -0.720 5.720 11 C 0.704 3.296 12 O -0.537 6.537 13 N -0.578 5.578 14 C 0.202 3.798 15 C -0.042 4.042 16 C -0.172 4.172 17 C -0.177 4.177 18 C -0.046 4.046 19 C -0.033 4.033 20 O -0.521 6.521 21 Si 0.697 3.303 22 O -0.161 6.161 23 C 0.532 3.468 24 O -0.445 6.445 25 H 0.053 0.947 26 H 0.053 0.947 27 H 0.057 0.943 28 H 0.073 0.927 29 H 0.058 0.942 30 H 0.053 0.947 31 H 0.053 0.947 32 H 0.071 0.929 33 H 0.077 0.923 34 H 0.083 0.917 35 H 0.086 0.914 36 H 0.073 0.927 37 H 0.073 0.927 38 H 0.086 0.914 39 H 0.076 0.924 40 H 0.082 0.918 41 H 0.441 0.559 42 H 0.114 0.886 43 H 0.130 0.870 44 H 0.155 0.845 45 H 0.153 0.847 46 H 0.136 0.864 47 H 0.380 0.620 48 H -0.248 1.248 49 H -0.255 1.255 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.852 3.205 1.404 5.204 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.110 4.110 3 C -0.208 4.208 4 C -0.097 4.097 5 C -0.163 4.163 6 C -0.150 4.150 7 C 0.034 3.966 8 C -0.150 4.150 9 C -0.163 4.163 10 N -0.383 5.383 11 C 0.405 3.595 12 O -0.410 6.410 13 N -0.325 5.325 14 C 0.082 3.918 15 C -0.093 4.093 16 C -0.192 4.192 17 C -0.197 4.197 18 C -0.097 4.097 19 C -0.143 4.143 20 O -0.327 6.327 21 Si 0.596 3.404 22 O -0.058 6.058 23 C 0.319 3.681 24 O -0.312 6.312 25 H 0.072 0.928 26 H 0.073 0.927 27 H 0.076 0.924 28 H 0.091 0.909 29 H 0.077 0.923 30 H 0.073 0.927 31 H 0.072 0.928 32 H 0.089 0.911 33 H 0.096 0.904 34 H 0.101 0.899 35 H 0.104 0.896 36 H 0.092 0.908 37 H 0.092 0.908 38 H 0.105 0.895 39 H 0.095 0.905 40 H 0.100 0.900 41 H 0.286 0.714 42 H 0.132 0.868 43 H 0.148 0.852 44 H 0.173 0.827 45 H 0.171 0.829 46 H 0.153 0.847 47 H 0.229 0.771 48 H -0.172 1.172 49 H -0.179 1.179 Dipole moment (debyes) X Y Z Total from point charges -3.567 3.359 0.230 4.905 hybrid contribution 0.580 -1.178 0.620 1.452 sum -2.988 2.181 0.850 3.795 Atomic orbital electron populations 1.21912 0.95283 1.01828 1.01780 1.21116 0.95661 0.96134 0.98070 1.21910 1.01236 0.95875 1.01769 1.21179 0.94796 0.95285 0.98465 1.21822 0.95686 1.01163 0.97636 1.21680 1.01276 0.91083 1.00963 1.21160 0.97225 0.94468 0.83724 1.21686 0.89927 1.02422 1.00976 1.21818 1.01246 0.95660 0.97592 1.45622 1.54494 1.29018 1.09180 1.15920 0.79712 0.82365 0.81548 1.91036 1.48648 1.42217 1.59068 1.46604 1.48466 1.29474 1.07948 1.19915 0.84509 0.89824 0.97592 1.22430 0.96846 1.00893 0.89119 1.21831 0.91705 1.04048 1.01617 1.21669 1.00643 1.01928 0.95413 1.22857 0.81792 1.04927 1.00086 1.24320 0.95557 0.94447 0.99958 1.86659 1.33327 1.41428 1.71320 0.94371 0.81059 0.85884 0.79115 1.83943 1.23754 1.56714 1.41387 1.20751 0.77214 0.80089 0.90042 1.90782 1.56553 1.68136 1.15721 0.92752 0.92746 0.92411 0.90877 0.92301 0.92747 0.92768 0.91054 0.90448 0.89852 0.89567 0.90788 0.90810 0.89540 0.90544 0.89957 0.71411 0.86785 0.85196 0.82686 0.82948 0.84650 0.77118 1.17179 1.17862 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.25 8.84 37.16 0.33 0.58 16 2 C -0.09 0.15 2.50 -90.62 -0.23 -0.07 16 3 C -0.15 0.27 8.84 37.16 0.33 0.60 16 4 C -0.08 0.19 1.76 -90.62 -0.16 0.03 16 5 C -0.13 0.26 4.61 -26.68 -0.12 0.14 16 6 C -0.11 0.29 5.11 -26.95 -0.14 0.15 16 7 C 0.12 -0.23 1.01 -133.11 -0.13 -0.36 16 8 C -0.11 0.31 5.11 -26.95 -0.14 0.17 16 9 C -0.13 0.27 4.61 -26.68 -0.12 0.14 16 10 N -0.72 1.16 5.89 -53.88 -0.32 0.85 16 11 C 0.70 0.99 8.63 -87.81 -0.76 0.23 16 12 O -0.54 -2.43 17.48 5.34 0.09 -2.34 16 13 N -0.58 -0.40 2.59 -122.09 -0.32 -0.72 16 14 C 0.20 0.02 6.24 -5.20 -0.03 -0.01 16 15 C -0.04 -0.08 6.90 -35.63 -0.25 -0.32 16 16 C -0.17 -0.36 10.81 -39.70 -0.43 -0.79 16 17 C -0.18 -0.36 10.81 -39.70 -0.43 -0.79 16 18 C -0.05 -0.08 6.20 -35.63 -0.22 -0.30 16 19 C -0.03 -0.01 2.99 36.01 0.11 0.10 16 20 O -0.52 -0.66 12.88 -35.23 -0.45 -1.12 16 21 Si 0.70 0.13 32.12 -169.99 -5.46 -5.33 16 22 O -0.16 -0.41 9.06 5.71 0.05 -0.36 16 23 C 0.53 0.24 6.51 -10.71 -0.07 0.17 16 24 O -0.44 -0.93 13.79 5.59 0.08 -0.85 16 25 H 0.05 -0.10 8.14 -51.92 -0.42 -0.52 16 26 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 27 H 0.06 -0.10 6.42 -51.93 -0.33 -0.44 16 28 H 0.07 -0.05 8.14 -51.92 -0.42 -0.47 16 29 H 0.06 -0.12 6.42 -51.93 -0.33 -0.45 16 30 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 31 H 0.05 -0.10 8.14 -51.92 -0.42 -0.52 16 32 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 33 H 0.08 -0.20 6.41 -51.92 -0.33 -0.53 16 34 H 0.08 -0.03 6.08 -51.93 -0.32 -0.34 16 35 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 36 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 37 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 38 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 39 H 0.08 -0.19 6.40 -51.93 -0.33 -0.52 16 40 H 0.08 -0.03 6.08 -51.93 -0.32 -0.34 16 41 H 0.44 -1.59 8.96 -40.82 -0.37 -1.95 16 42 H 0.11 -0.12 8.01 -51.93 -0.42 -0.53 16 43 H 0.13 -0.15 7.86 -51.93 -0.41 -0.56 16 44 H 0.16 0.25 8.06 -52.49 -0.42 -0.18 16 45 H 0.15 0.15 8.06 -52.49 -0.42 -0.27 16 46 H 0.14 -0.15 7.96 -51.93 -0.41 -0.57 16 47 H 0.38 -0.55 8.70 45.56 0.40 -0.16 16 48 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 49 H -0.25 -0.74 7.11 56.52 0.40 -0.34 16 LS Contribution 386.34 15.07 5.82 5.82 Total: 0.00 -7.16 386.34 -10.41 -17.57 By element: Atomic # 1 Polarization: -5.74 SS G_CDS: -7.44 Total: -13.18 kcal Atomic # 6 Polarization: 2.12 SS G_CDS: -2.46 Total: -0.35 kcal Atomic # 7 Polarization: 0.76 SS G_CDS: -0.63 Total: 0.13 kcal Atomic # 8 Polarization: -4.43 SS G_CDS: -0.23 Total: -4.67 kcal Atomic # 14 Polarization: 0.13 SS G_CDS: -5.46 Total: -5.33 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -7.16 -10.41 -17.57 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_7_16621382_18345148.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.409 kcal (2) G-P(sol) polarization free energy of solvation -7.160 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.569 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.407 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.567 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.975 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds